RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 METTL22Q9BUU2 404 aaPredicted RBP7.45□□□□□ -1.22
CTR9-204ENST00000529355 TNK2Q07912 1038 aa7.44□□□□□ -1.22
CTR9-204ENST00000529355 BNIP3Q12983 259 aa7.44□□□□□ -1.22
CTR9-204ENST00000529355 TDRD10Q5VZ19 366 aaKnown RBP7.44□□□□□ -1.22
CTR9-204ENST00000529355 SPACA3Q8IXA5 215 aa7.44□□□□□ -1.22
CTR9-204ENST00000529355 TM9SF2Q99805 663 aa7.44□□□□□ -1.22
CTR9-204ENST00000529355 TANGO6Q9C0B7 1094 aa7.44□□□□□ -1.22
CTR9-204ENST00000529355 CAPN6Q9Y6Q1 641 aa7.44□□□□□ -1.22
CTR9-204ENST00000529355 IGF2BP3O00425 579 aaKnown RBP eCLIP7.43□□□□□ -1.22
CTR9-204ENST00000529355 CD97P48960 835 aa7.43□□□□□ -1.22
CTR9-204ENST00000529355 SNW1Q13573 536 aaKnown RBP7.43□□□□□ -1.22
CTR9-204ENST00000529355 NBPF12Q5TAG4 269 aaPredicted RBP7.43□□□□□ -1.22
CTR9-204ENST00000529355 CDKAL1Q5VV42 579 aa7.43□□□□□ -1.22
CTR9-204ENST00000529355 INTS3Q68E01 1043 aaKnown RBP7.43□□□□□ -1.22
CTR9-204ENST00000529355 NFXL1Q6ZNB6 911 aa7.43□□□□□ -1.22
CTR9-204ENST00000529355 MICAL1Q8TDZ2 1067 aa7.43□□□□□ -1.22
CTR9-204ENST00000529355 GTF2IRD1Q9UHL9 959 aa7.43□□□□□ -1.22
CTR9-204ENST00000529355 MINPP1Q9UNW1 487 aa7.43□□□□□ -1.22
CTR9-204ENST00000529355 CEACAM5P06731 702 aa7.42□□□□□ -1.22
CTR9-204ENST00000529355 HNRNPLLQ8WVV9 542 aaKnown RBP7.42□□□□□ -1.22
CTR9-204ENST00000529355 HSPA12BQ96MM6 686 aa7.42□□□□□ -1.22
CTR9-204ENST00000529355 MAPK8IP1Q9UQF2 711 aa7.42□□□□□ -1.22
CTR9-204ENST00000529355 SHISA3A0PJX4 238 aa7.41□□□□□ -1.22
CTR9-204ENST00000529355 TP53P04637 393 aaPredicted RBP7.41□□□□□ -1.22
CTR9-204ENST00000529355 ZNF865P0CJ78 1059 aaPredicted RBP7.41□□□□□ -1.22
CTR9-204ENST00000529355 ETV3P41162 512 aa7.41□□□□□ -1.22
CTR9-204ENST00000529355 ZNF574Q6ZN55 896 aaPredicted RBP7.41□□□□□ -1.22
CTR9-204ENST00000529355 ARHGAP27Q6ZUM4 889 aa7.41□□□□□ -1.22
CTR9-204ENST00000529355 WFDC3Q8IUB2 231 aa7.41□□□□□ -1.22
CTR9-204ENST00000529355 TAB3Q8N5C8 712 aaPredicted RBP7.41□□□□□ -1.22
CTR9-204ENST00000529355 DTWD2Q8NBA8 298 aa7.41□□□□□ -1.22
CTR9-204ENST00000529355 PPP1R1BQ9UD71 204 aaPredicted RBP7.41□□□□□ -1.22
CTR9-204ENST00000529355 STRIP2Q9ULQ0 834 aa7.41□□□□□ -1.22
CTR9-204ENST00000529355 ST14Q9Y5Y6 855 aa7.41□□□□□ -1.22
CTR9-204ENST00000529355 B2RBV5 119 aa7.4□□□□□ -1.22
CTR9-204ENST00000529355 H3BS24 57 aa7.4□□□□□ -1.22
CTR9-204ENST00000529355 CLEC3AO75596 197 aa7.4□□□□□ -1.22
CTR9-204ENST00000529355 GTF2F1P35269 517 aaKnown RBP eCLIP7.4□□□□□ -1.22
CTR9-204ENST00000529355 AXDND1Q5T1B0 1012 aaPredicted RBP7.4□□□□□ -1.22
CTR9-204ENST00000529355 DCAF15Q66K64 600 aa7.4□□□□□ -1.22
CTR9-204ENST00000529355 SPRED2Q7Z698 418 aa7.4□□□□□ -1.22
CTR9-204ENST00000529355 MFSD4AQ8N468 514 aa7.4□□□□□ -1.22
CTR9-204ENST00000529355 CELF2-AS1Q8N7Q2 184 aa7.4□□□□□ -1.22
CTR9-204ENST00000529355 NETO1Q8TDF5 533 aa7.4□□□□□ -1.22
CTR9-204ENST00000529355 RNF141Q8WVD5 230 aa7.4□□□□□ -1.22
CTR9-204ENST00000529355 SUCOQ9UBS9 1254 aaKnown RBP7.4□□□□□ -1.22
CTR9-204ENST00000529355 GNAT3A8MTJ3 354 aa7.39□□□□□ -1.23
CTR9-204ENST00000529355 FAM155AB1AL88 458 aaPredicted RBP7.39□□□□□ -1.23
CTR9-204ENST00000529355 SPINK2P20155 84 aa7.39□□□□□ -1.23
CTR9-204ENST00000529355 CASP7P55210 303 aa7.39□□□□□ -1.23
CTR9-204ENST00000529355 CPSF6Q16630 551 aaKnown RBP eCLIP7.39□□□□□ -1.23
CTR9-204ENST00000529355 ANKS3Q6ZW76 656 aa7.39□□□□□ -1.23
CTR9-204ENST00000529355 TMC3Q7Z5M5 1100 aa7.39□□□□□ -1.23
CTR9-204ENST00000529355 KLHL6Q8WZ60 621 aa7.39□□□□□ -1.23
CTR9-204ENST00000529355 FBXL18Q96ME1 805 aa7.39□□□□□ -1.23
CTR9-204ENST00000529355 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.39□□□□□ -1.23
CTR9-204ENST00000529355 DUSP15Q9H1R2 295 aaPredicted RBP7.39□□□□□ -1.23
CTR9-204ENST00000529355 SEMA3GQ9NS98 782 aa7.39□□□□□ -1.23
CTR9-204ENST00000529355 PRKAG3Q9UGI9 489 aa7.39□□□□□ -1.23
CTR9-204ENST00000529355 SHOXO15266 292 aa7.38□□□□□ -1.23
CTR9-204ENST00000529355 ATP2B1P20020 1258 aa7.38□□□□□ -1.23
CTR9-204ENST00000529355 CYP7A1P22680 504 aa7.38□□□□□ -1.23
CTR9-204ENST00000529355 PMS1P54277 932 aaKnown RBP7.38□□□□□ -1.23
CTR9-204ENST00000529355 NBPF9Q3BBW0 867 aa7.38□□□□□ -1.23
CTR9-204ENST00000529355 C22orf34Q6ZV56 151 aa7.38□□□□□ -1.23
CTR9-204ENST00000529355 DTX1Q86Y01 620 aa7.38□□□□□ -1.23
CTR9-204ENST00000529355 OR6P1Q8NGX9 317 aa7.38□□□□□ -1.23
CTR9-204ENST00000529355 PRDM14Q9GZV8 571 aa7.38□□□□□ -1.23
CTR9-204ENST00000529355 MKRN2Q9H000 416 aaKnown RBP7.38□□□□□ -1.23
CTR9-204ENST00000529355 MKNK2Q9HBH9 465 aa7.38□□□□□ -1.23
CTR9-204ENST00000529355 ATP13A1Q9HD20 1204 aa7.38□□□□□ -1.23
CTR9-204ENST00000529355 ST7Q9NRC1 585 aa7.38□□□□□ -1.23
CTR9-204ENST00000529355 ZNF214Q9UL59 606 aaPredicted RBP7.38□□□□□ -1.23
CTR9-204ENST00000529355 KIAA1324LA8MWY0 1029 aaPredicted RBP7.37□□□□□ -1.23
CTR9-204ENST00000529355 KLF4O43474 513 aa7.37□□□□□ -1.23
CTR9-204ENST00000529355 GRIK1P39086 918 aa7.37□□□□□ -1.23
CTR9-204ENST00000529355 CCNFP41002 786 aa7.37□□□□□ -1.23
CTR9-204ENST00000529355 IFI16Q16666 785 aaKnown RBP7.37□□□□□ -1.23
CTR9-204ENST00000529355 AOC3Q16853 763 aa7.37□□□□□ -1.23
CTR9-204ENST00000529355 LARP1BQ659C4 914 aaKnown RBP7.37□□□□□ -1.23
CTR9-204ENST00000529355 ZNF746Q6NUN9 644 aaPredicted RBP7.37□□□□□ -1.23
CTR9-204ENST00000529355 C19orf47Q8N9M1 422 aaKnown RBP7.37□□□□□ -1.23
CTR9-204ENST00000529355 BCL7CQ8WUZ0 217 aaPredicted RBP7.37□□□□□ -1.23
CTR9-204ENST00000529355 UBE2FQ969M7 185 aa7.37□□□□□ -1.23
CTR9-204ENST00000529355 ZSWIM5Q9P217 1185 aa7.37□□□□□ -1.23
CTR9-204ENST00000529355 CCDC39Q9UFE4 941 aa7.37□□□□□ -1.23
CTR9-204ENST00000529355 PITPNM2Q9BZ72 1349 aa7.36□□□□□ -1.23
CTR9-204ENST00000529355 CD8BP10966 210 aa7.36□□□□□ -1.23
CTR9-204ENST00000529355 KIR3DL1P43629 444 aa7.36□□□□□ -1.23
CTR9-204ENST00000529355 GNPTABQ3T906 1256 aa7.36□□□□□ -1.23
CTR9-204ENST00000529355 INTS5Q6P9B9 1019 aaKnown RBP7.36□□□□□ -1.23
CTR9-204ENST00000529355 C6orf15Q6UXA7 325 aaPredicted RBP7.36□□□□□ -1.23
CTR9-204ENST00000529355 CCDC144CPQ8IYA2 1237 aa7.36□□□□□ -1.23
CTR9-204ENST00000529355 LGR4Q9BXB1 951 aa7.36□□□□□ -1.23
CTR9-204ENST00000529355 ASPNQ9BXN1 380 aa7.36□□□□□ -1.23
CTR9-204ENST00000529355 PCMTD2Q9NV79 361 aa7.36□□□□□ -1.23
CTR9-204ENST00000529355 ACTR10Q9NZ32 417 aa7.36□□□□□ -1.23
CTR9-204ENST00000529355 ZNF451Q9Y4E5 1061 aa7.36□□□□□ -1.23
CTR9-204ENST00000529355 MEIS1O00470 390 aa7.35□□□□□ -1.23
CTR9-204ENST00000529355 CBFA2T2O43439 604 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms