RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	TNFRSF25	Q93038	417 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	MKNK2	Q9HBH9	465 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	CD209	Q9NNX6	404 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	CABP5	Q9NP86	173 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	DDX60L	Q5H9U9	1706 aa	Known RBP	11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	UFL1	O94874	794 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	MDM2	Q00987	491 aa	Predicted RBP	11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	NCAPH	Q15003	741 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	LONRF3	Q496Y0	759 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	TXNRD3	Q86VQ6	643 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	METTL16	Q86W50	562 aa	Known RBP	11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	SP8	Q8IXZ3	490 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	DAGLB	Q8NCG7	672 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	VPS54	Q9P1Q0	977 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	PYCARD	Q9ULZ3	195 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	LTBP1	Q14766	1721 aa		11.67	□□□□□ -0.54
PGAP2-231	ENST00000528216	C10orf71	Q711Q0	1435 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	GAK	O14976	1311 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	CCP110	O43303	1012 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	RRP9	O43818	475 aa	Known RBP	11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	PRDM1	O75626	825 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	PLEKHA8P1	O95397	391 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	ERCC5	P28715	1186 aa	Predicted RBP	11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	SARS	P49591	514 aa	Known RBP	11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	GPSM2	P81274	684 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	TFAP4	Q01664	338 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	NR5A1	Q13285	461 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	PPP4R3B	Q5MIZ7	849 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	TTC38	Q5R3I4	469 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	RCSD1	Q6JBY9	416 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	SRBD1	Q8N5C6	995 aa	Known RBP	11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	CCDC112	Q8NEF3	446 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	SPATA20	Q8TB22	786 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	SMARCE1	Q969G3	411 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	CLIC6	Q96NY7	704 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	PAXBP1	Q9Y5B6	917 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	PCDHB6	Q9Y5E3	794 aa		11.66	□□□□□ -0.54
PGAP2-231	ENST00000528216	NRXN2	Q9P2S2	1712 aa		11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	UQCRHL	A0A096LP55	91 aa		11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	hCG_1984214	I3L0E3	225 aa		11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	UQCRH	P07919	91 aa		11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	SLFN14	P0C7P3	912 aa		11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	NLRP5	P59047	1200 aa		11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	ATP2C1	P98194	919 aa	Predicted RBP	11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	ORC2	Q13416	577 aa	Predicted RBP	11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	CCDC82	Q8N4S0	544 aa		11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	ZNF713	Q8N859	430 aa	Predicted RBP	11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	PNMA1	Q8ND90	353 aa		11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	ENOX1	Q8TC92	643 aa	Known RBP	11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	CACTIN	Q8WUQ7	758 aa	Known RBP	11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	SYT17	Q9BSW7	474 aa		11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	PCDHA5	Q9Y5H7	936 aa		11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	CD2AP	Q9Y5K6	639 aa		11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	FOCAD	Q5VW36	1801 aa		11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	MYO3B	Q8WXR4	1341 aa		11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	CDK5RAP2	Q96SN8	1893 aa		11.65	□□□□□ -0.54
PGAP2-231	ENST00000528216	LAD1	O00515	517 aa		11.65	□□□□□ -0.55
PGAP2-231	ENST00000528216	POLR2D	O15514	142 aa	Known RBP	11.65	□□□□□ -0.55
PGAP2-231	ENST00000528216	ACTN4	O43707	911 aa	Known RBP	11.65	□□□□□ -0.55
PGAP2-231	ENST00000528216	USP17L8	P0C7I0	530 aa		11.65	□□□□□ -0.55
PGAP2-231	ENST00000528216	TSPY3	P0CV98	308 aa		11.65	□□□□□ -0.55
PGAP2-231	ENST00000528216	TSPY8	P0CW00	308 aa		11.65	□□□□□ -0.55
PGAP2-231	ENST00000528216	PNOC	Q13519	176 aa		11.65	□□□□□ -0.55
PGAP2-231	ENST00000528216	C16orf86	Q6ZW13	317 aa		11.65	□□□□□ -0.55
PGAP2-231	ENST00000528216	OXER1	Q8TDS5	423 aa		11.65	□□□□□ -0.55
PGAP2-231	ENST00000528216	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.65	□□□□□ -0.55
PGAP2-231	ENST00000528216	GSDMA	Q96QA5	445 aa		11.65	□□□□□ -0.55
PGAP2-231	ENST00000528216	COA1	Q9GZY4	146 aa		11.65	□□□□□ -0.55
PGAP2-231	ENST00000528216	PLIN4	Q96Q06	1357 aa		11.64	□□□□□ -0.55
PGAP2-231	ENST00000528216	BIN1	O00499	593 aa		11.64	□□□□□ -0.55
PGAP2-231	ENST00000528216	CYP2D6	P10635	497 aa		11.64	□□□□□ -0.55
PGAP2-231	ENST00000528216	LONP1	P36776	959 aa	Known RBP	11.64	□□□□□ -0.55
PGAP2-231	ENST00000528216	FANCC	Q00597	558 aa		11.64	□□□□□ -0.55
PGAP2-231	ENST00000528216	MORC3	Q14149	939 aa		11.64	□□□□□ -0.55
PGAP2-231	ENST00000528216	NPY5R	Q15761	445 aa		11.64	□□□□□ -0.55
PGAP2-231	ENST00000528216	BLID	Q8IZY5	108 aa		11.64	□□□□□ -0.55
PGAP2-231	ENST00000528216	NLGN2	Q8NFZ4	835 aa		11.64	□□□□□ -0.55
PGAP2-231	ENST00000528216	NEDD1	Q8NHV4	660 aa		11.64	□□□□□ -0.55
PGAP2-231	ENST00000528216	SPZ1	Q9BXG8	430 aa		11.64	□□□□□ -0.55
PGAP2-231	ENST00000528216	GTPBP4	Q9BZE4	634 aa	Known RBP	11.64	□□□□□ -0.55
PGAP2-231	ENST00000528216	NRBP1	Q9UHY1	535 aa		11.64	□□□□□ -0.55
PGAP2-231	ENST00000528216	PCDHA4	Q9UN74	947 aa		11.64	□□□□□ -0.55
PGAP2-231	ENST00000528216	UBE2Q2L	H0YL09	131 aa		11.63	□□□□□ -0.55
PGAP2-231	ENST00000528216	SKIL	P12757	684 aa		11.63	□□□□□ -0.55
PGAP2-231	ENST00000528216	PDE6B	P35913	854 aa		11.63	□□□□□ -0.55
PGAP2-231	ENST00000528216	TXLNA	P40222	546 aa		11.63	□□□□□ -0.55
PGAP2-231	ENST00000528216	NOV	P48745	357 aa		11.63	□□□□□ -0.55
PGAP2-231	ENST00000528216	CCDC144B	Q3MJ40	725 aa		11.63	□□□□□ -0.55
PGAP2-231	ENST00000528216	FAM47A	Q5JRC9	791 aa		11.63	□□□□□ -0.55
PGAP2-231	ENST00000528216	SH3RF1	Q7Z6J0	888 aa		11.63	□□□□□ -0.55
PGAP2-231	ENST00000528216	TEX11	Q8IYF3	940 aa		11.63	□□□□□ -0.55
PGAP2-231	ENST00000528216	CMTR1	Q8N1G2	835 aa	Known RBP	11.63	□□□□□ -0.55
PGAP2-231	ENST00000528216	IQUB	Q8NA54	791 aa		11.63	□□□□□ -0.55
PGAP2-231	ENST00000528216	TBC1D16	Q8TBP0	767 aa		11.63	□□□□□ -0.55
PGAP2-231	ENST00000528216	XPO4	Q9C0E2	1151 aa	Known RBP	11.63	□□□□□ -0.55
PGAP2-231	ENST00000528216	CSRNP2	Q9H175	543 aa		11.63	□□□□□ -0.55
PGAP2-231	ENST00000528216	IFNK	Q9P0W0	207 aa		11.63	□□□□□ -0.55

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