RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 AGPSO00116 658 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 MEFVO15553 781 aaPredicted RBP8.39□□□□□ -1.07
SOX6-208ENST00000527619 ZBED6P86452 979 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 KCNA1Q09470 495 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 PNOCQ13519 176 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 MTHFSDQ2M296 383 aaKnown RBP8.39□□□□□ -1.07
SOX6-208ENST00000527619 TUBB8Q3ZCM7 444 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 FILIP1LQ4L180 1135 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 STAG2Q8N3U4 1231 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 RBM46Q8TBY0 533 aaKnown RBP8.39□□□□□ -1.07
SOX6-208ENST00000527619 RMDN2Q96LZ7 410 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 SPOCK3Q9BQ16 436 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 EHD4Q9H223 541 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 RETREG1Q9H6L5 497 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 KLC4Q9NSK0 619 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 MYO1AQ9UBC5 1043 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 ARHGAP23Q9P227 1491 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 STRCQ7RTU9 1775 aa8.39□□□□□ -1.07
SOX6-208ENST00000527619 MYO5BQ9ULV0 1848 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 SLIT1O75093 1534 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 A0A1B0GUA9 196 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 TARSL2A2RTX5 802 aaKnown RBP8.38□□□□□ -1.07
SOX6-208ENST00000527619 GOLGA8KD6RF30 607 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 TIMM44O43615 452 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 RFX1P22670 979 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 MYSM1Q5VVJ2 828 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 KLHL10Q6JEL2 608 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 MICALCLQ6ZW33 695 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 NACA2Q9H009 215 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 RABEP2Q9H5N1 569 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 HOOK1Q9UJC3 728 aaKnown RBP8.38□□□□□ -1.07
SOX6-208ENST00000527619 NCAPD2Q15021 1401 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 CEMIPQ8WUJ3 1361 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 ZNF18P17022 549 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 ABL2P42684 1182 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 RANBP1P43487 201 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 CDR1P51861 262 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 SMTNP53814 917 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 AMPD2Q01433 879 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 SFSWAPQ12872 951 aaKnown RBP8.38□□□□□ -1.07
SOX6-208ENST00000527619 PLCB4Q15147 1175 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 ZNF394Q53GI3 561 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 HSP90AA4PQ58FG1 418 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 NCAPH2Q6IBW4 605 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 SYNE3Q6ZMZ3 975 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 DHX32Q7L7V1 743 aaKnown RBP8.38□□□□□ -1.07
SOX6-208ENST00000527619 BRAPQ7Z569 592 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 YTHDF3Q7Z739 585 aaKnown RBP8.38□□□□□ -1.07
SOX6-208ENST00000527619 MORC4Q8TE76 937 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 EZH1Q92800 747 aaPredicted RBP8.38□□□□□ -1.07
SOX6-208ENST00000527619 ZBTB10Q96DT7 871 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 CDC5LQ99459 802 aaKnown RBP8.38□□□□□ -1.07
SOX6-208ENST00000527619 SH3GL2Q99962 352 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 BOLA2Q9H3K6 86 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 PHAXQ9H814 394 aaKnown RBP8.38□□□□□ -1.07
SOX6-208ENST00000527619 SPATA7Q9P0W8 599 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 ALKQ9UM73 1620 aa8.38□□□□□ -1.07
SOX6-208ENST00000527619 NDUFAB1O14561 156 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 POLR3DP05423 398 aaPredicted RBP8.37□□□□□ -1.07
SOX6-208ENST00000527619 CYP21A2P08686 494 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 PDE4BQ07343 736 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 NR1I3Q14994 352 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 CEP85LQ5SZL2 805 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 BEND3Q5T5X7 828 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 ANO1Q5XXA6 986 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 CCDC70Q6NSX1 233 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 ARMC9Q7Z3E5 817 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 PPFIBP1Q86W92 1011 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 LSM14AQ8ND56 463 aaKnown RBP8.37□□□□□ -1.07
SOX6-208ENST00000527619 PAGR1Q9BTK6 254 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 SELENOOQ9BVL4 669 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 NCOA5Q9HCD5 579 aaKnown RBP8.37□□□□□ -1.07
SOX6-208ENST00000527619 HPSEQ9Y251 543 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 ITM2BQ9Y287 266 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 KDM6AO15550 1401 aaPredicted RBP8.37□□□□□ -1.07
SOX6-208ENST00000527619 COL15A1P39059 1388 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 F8VZ95 297 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 SKOR1P84550 965 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 USP4Q13107 963 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 DPH6Q7L8W6 267 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 WAPLQ7Z5K2 1190 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 NEK9Q8TD19 979 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 DHRS1Q96LJ7 313 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 AGXT2Q9BYV1 514 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 VCPKMTQ9H867 229 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 METTL14Q9HCE5 456 aaKnown RBP8.37□□□□□ -1.07
SOX6-208ENST00000527619 PA2G4Q9UQ80 394 aaKnown RBP8.37□□□□□ -1.07
SOX6-208ENST00000527619 NFE2L3Q9Y4A8 694 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 AKAP12Q02952 1782 aa8.37□□□□□ -1.07
SOX6-208ENST00000527619 RASSF9O75901 435 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 RTN3O95197 1032 aaPredicted RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 ACTN3Q08043 901 aaPredicted RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 LAMB3Q13751 1172 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 TMEM110Q86TL2 294 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 SAPCD2Q86UD0 394 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 KIAA0825Q8IV33 1275 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 NUTM2AQ8IVF1 878 aaPredicted RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 RBM17Q96I25 401 aaKnown RBP8.36□□□□□ -1.07
SOX6-208ENST00000527619 C8orf76Q96K31 380 aa8.36□□□□□ -1.07
SOX6-208ENST00000527619 FAM81BQ96LP2 452 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms