RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 CATIPQ7Z7H3 387 aa21.85■■□□□ 1.09
SMPD1-203ENST00000527275 GPT2Q8TD30 523 aa21.85■■□□□ 1.09
SMPD1-203ENST00000527275 NUP133Q8WUM0 1156 aa21.85■■□□□ 1.09
SMPD1-203ENST00000527275 CTDNEP1O95476 244 aa21.84■■□□□ 1.09
SMPD1-203ENST00000527275 PRKG1Q13976 671 aa21.84■■□□□ 1.09
SMPD1-203ENST00000527275 FAM184AQ8NB25 1140 aa21.84■■□□□ 1.09
SMPD1-203ENST00000527275 PNMA1Q8ND90 353 aa21.84■■□□□ 1.09
SMPD1-203ENST00000527275 ZNF341Q9BYN7 854 aa21.84■■□□□ 1.09
SMPD1-203ENST00000527275 GDPD2Q9HCC8 539 aa21.84■■□□□ 1.09
SMPD1-203ENST00000527275 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.84■■□□□ 1.09
SMPD1-203ENST00000527275 CLIP2Q9UDT6 1046 aa21.84■■□□□ 1.09
SMPD1-203ENST00000527275 ZBTB21Q9ULJ3 1066 aa21.84■■□□□ 1.09
SMPD1-203ENST00000527275 METAP2P50579 478 aaKnown RBP eCLIP21.84■■□□□ 1.09
SMPD1-203ENST00000527275 ATP2B2Q01814 1243 aa21.84■■□□□ 1.09
SMPD1-203ENST00000527275 CDCA5Q96FF9 252 aa21.84■■□□□ 1.09
SMPD1-203ENST00000527275 CNPY2Q9Y2B0 182 aa21.84■■□□□ 1.09
SMPD1-203ENST00000527275 TOP1P11387 765 aaKnown RBP21.83■■□□□ 1.09
SMPD1-203ENST00000527275 INPP5BP32019 993 aa21.83■■□□□ 1.09
SMPD1-203ENST00000527275 HMGN5P82970 282 aaKnown RBP21.83■■□□□ 1.09
SMPD1-203ENST00000527275 SIAH1Q8IUQ4 282 aa21.83■■□□□ 1.09
SMPD1-203ENST00000527275 WRNIP1Q96S55 665 aa21.83■■□□□ 1.09
SMPD1-203ENST00000527275 EEF2P13639 858 aaKnown RBP21.82■■□□□ 1.08
SMPD1-203ENST00000527275 ICA1Q05084 483 aa21.82■■□□□ 1.08
SMPD1-203ENST00000527275 KLRG1Q96E93 195 aa21.82■■□□□ 1.08
SMPD1-203ENST00000527275 PTPDC1A2A3K4 754 aa21.82■■□□□ 1.08
SMPD1-203ENST00000527275 GOLGA6L3A6NEY3 463 aa21.82■■□□□ 1.08
SMPD1-203ENST00000527275 CTNND1O60716 968 aaKnown RBP21.82■■□□□ 1.08
SMPD1-203ENST00000527275 ASNSP08243 561 aa21.82■■□□□ 1.08
SMPD1-203ENST00000527275 CDC27P30260 824 aa21.82■■□□□ 1.08
SMPD1-203ENST00000527275 ADD1P35611 737 aaKnown RBP21.82■■□□□ 1.08
SMPD1-203ENST00000527275 LDHDQ86WU2 507 aa21.82■■□□□ 1.08
SMPD1-203ENST00000527275 LRRC47Q8N1G4 583 aaKnown RBP21.82■■□□□ 1.08
SMPD1-203ENST00000527275 FANCBQ8NB91 859 aa21.82■■□□□ 1.08
SMPD1-203ENST00000527275 ZNF112Q9UJU3 913 aa21.82■■□□□ 1.08
SMPD1-203ENST00000527275 MTMR7Q9Y216 660 aa21.82■■□□□ 1.08
SMPD1-203ENST00000527275 GOLGA8AA7E2F4 631 aa21.81■■□□□ 1.08
SMPD1-203ENST00000527275 MBD3O95983 291 aa21.81■■□□□ 1.08
SMPD1-203ENST00000527275 CAVIN1Q6NZI2 390 aaKnown RBP21.81■■□□□ 1.08
SMPD1-203ENST00000527275 TMEM87AQ8NBN3 555 aa21.81■■□□□ 1.08
SMPD1-203ENST00000527275 ZKSCAN4Q969J2 545 aaPredicted RBP21.81■■□□□ 1.08
SMPD1-203ENST00000527275 FAM217BQ9NTX9 383 aaPredicted RBP21.81■■□□□ 1.08
SMPD1-203ENST00000527275 DDAH1O94760 285 aa21.81■■□□□ 1.08
SMPD1-203ENST00000527275 RCAN1P53805 252 aa21.81■■□□□ 1.08
SMPD1-203ENST00000527275 DNM1Q05193 864 aaKnown RBP21.81■■□□□ 1.08
SMPD1-203ENST00000527275 FERMT3Q86UX7 667 aa21.81■■□□□ 1.08
SMPD1-203ENST00000527275 NYAP2Q9P242 653 aa21.81■■□□□ 1.08
SMPD1-203ENST00000527275 FSD2A1L4K1 749 aa21.8■■□□□ 1.08
SMPD1-203ENST00000527275 PPFIA3O75145 1194 aa21.8■■□□□ 1.08
SMPD1-203ENST00000527275 USP2O75604 605 aaPredicted RBP21.8■■□□□ 1.08
SMPD1-203ENST00000527275 KIF3AQ9Y496 699 aa21.8■■□□□ 1.08
SMPD1-203ENST00000527275 TRAF5O00463 557 aa21.8■■□□□ 1.08
SMPD1-203ENST00000527275 DHX16O60231 1041 aaKnown RBP21.8■■□□□ 1.08
SMPD1-203ENST00000527275 PPP1R12BO60237 982 aaPredicted RBP21.8■■□□□ 1.08
SMPD1-203ENST00000527275 CALM1P0DP23 149 aa21.8■■□□□ 1.08
SMPD1-203ENST00000527275 CALM2P0DP24 149 aa21.8■■□□□ 1.08
SMPD1-203ENST00000527275 CALM3P0DP25 149 aa21.8■■□□□ 1.08
SMPD1-203ENST00000527275 RTN1Q16799 776 aa21.8■■□□□ 1.08
SMPD1-203ENST00000527275 PPP4R3BQ5MIZ7 849 aa21.8■■□□□ 1.08
SMPD1-203ENST00000527275 RASGRP2Q7LDG7 609 aa21.8■■□□□ 1.08
SMPD1-203ENST00000527275 CCDC84Q86UT8 332 aaPredicted RBP21.8■■□□□ 1.08
SMPD1-203ENST00000527275 MYH4Q9Y623 1939 aa21.79■■□□□ 1.08
SMPD1-203ENST00000527275 TCHHQ07283 1943 aa21.79■■□□□ 1.08
SMPD1-203ENST00000527275 H3BQV1 296 aa21.79■■□□□ 1.08
SMPD1-203ENST00000527275 FMR1Q06787 632 aaKnown RBP eCLIP21.79■■□□□ 1.08
SMPD1-203ENST00000527275 L1TD1Q5T7N2 865 aaKnown RBP21.79■■□□□ 1.08
SMPD1-203ENST00000527275 IFFO2Q5TF58 517 aa21.79■■□□□ 1.08
SMPD1-203ENST00000527275 MKL1Q969V6 931 aa21.79■■□□□ 1.08
SMPD1-203ENST00000527275 A0A1W2PRG0 241 aa21.78■■□□□ 1.08
SMPD1-203ENST00000527275 CPLX1O14810 134 aa21.78■■□□□ 1.08
SMPD1-203ENST00000527275 GADD45BO75293 160 aaPredicted RBP21.78■■□□□ 1.08
SMPD1-203ENST00000527275 NF2P35240 595 aa21.78■■□□□ 1.08
SMPD1-203ENST00000527275 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.78■■□□□ 1.08
SMPD1-203ENST00000527275 NID2Q14112 1375 aa21.78■■□□□ 1.08
SMPD1-203ENST00000527275 ECE1P42892 770 aa21.78■■□□□ 1.08
SMPD1-203ENST00000527275 CMTR1Q8N1G2 835 aaKnown RBP21.78■■□□□ 1.08
SMPD1-203ENST00000527275 ATAD5Q96QE3 1844 aa21.78■■□□□ 1.08
SMPD1-203ENST00000527275 FIBPO43427 364 aa21.77■■□□□ 1.08
SMPD1-203ENST00000527275 CSPP1Q1MSJ5 1256 aa21.77■■□□□ 1.08
SMPD1-203ENST00000527275 SCYL3Q8IZE3 742 aa21.77■■□□□ 1.08
SMPD1-203ENST00000527275 CTCFLQ8NI51 663 aaPredicted RBP21.77■■□□□ 1.08
SMPD1-203ENST00000527275 ACER1Q8TDN7 264 aa21.77■■□□□ 1.08
SMPD1-203ENST00000527275 CCDC196A0A1B0GTZ2 297 aa21.77■■□□□ 1.07
SMPD1-203ENST00000527275 PPP2R5BQ15173 497 aa21.77■■□□□ 1.07
SMPD1-203ENST00000527275 NTRK3Q16288 839 aa21.77■■□□□ 1.07
SMPD1-203ENST00000527275 GPBP1L1Q9HC44 474 aaPredicted RBP21.77■■□□□ 1.07
SMPD1-203ENST00000527275 ISY1Q9ULR0 285 aaKnown RBP21.77■■□□□ 1.07
SMPD1-203ENST00000527275 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.76■■□□□ 1.07
SMPD1-203ENST00000527275 MOB2Q70IA6 237 aa21.76■■□□□ 1.07
SMPD1-203ENST00000527275 CCDC82Q8N4S0 544 aa21.76■■□□□ 1.07
SMPD1-203ENST00000527275 GINM1Q9NU53 330 aa21.76■■□□□ 1.07
SMPD1-203ENST00000527275 RBM27Q9P2N5 1060 aaKnown RBP21.76■■□□□ 1.07
SMPD1-203ENST00000527275 USP17L5A8MUK1 530 aa21.75■■□□□ 1.07
SMPD1-203ENST00000527275 RAD21O60216 631 aa21.75■■□□□ 1.07
SMPD1-203ENST00000527275 PDHBP11177 359 aa21.75■■□□□ 1.07
SMPD1-203ENST00000527275 USP17L2Q6R6M4 530 aa21.75■■□□□ 1.07
SMPD1-203ENST00000527275 STAG2Q8N3U4 1231 aa21.75■■□□□ 1.07
SMPD1-203ENST00000527275 MAP3K14Q99558 947 aa21.75■■□□□ 1.07
SMPD1-203ENST00000527275 ZNF408Q9H9D4 720 aa21.75■■□□□ 1.07
SMPD1-203ENST00000527275 ARHGEF10LQ9HCE6 1279 aa21.75■■□□□ 1.07
SMPD1-203ENST00000527275 GOLGA8HP0CJ92 632 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms