RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 ERVK-24P63145 666 aa20.3■□□□□ 0.84
CCS-203ENST00000526058 ATP2B2Q01814 1243 aa20.3■□□□□ 0.84
CCS-203ENST00000526058 VPS53Q5VIR6 699 aa20.3■□□□□ 0.84
CCS-203ENST00000526058 TMEM106CQ9BVX2 250 aa20.3■□□□□ 0.84
CCS-203ENST00000526058 NAPBQ9H115 298 aa20.3■□□□□ 0.84
CCS-203ENST00000526058 KANSL2Q9H9L4 492 aa20.3■□□□□ 0.84
CCS-203ENST00000526058 HELLSQ9NRZ9 838 aa20.3■□□□□ 0.84
CCS-203ENST00000526058 NMIQ13287 307 aaPredicted RBP20.29■□□□□ 0.84
CCS-203ENST00000526058 MTFR1Q15390 333 aa20.29■□□□□ 0.84
CCS-203ENST00000526058 SPICE1Q8N0Z3 855 aa20.29■□□□□ 0.84
CCS-203ENST00000526058 GTF3C2Q8WUA4 911 aaPredicted RBP20.29■□□□□ 0.84
CCS-203ENST00000526058 SPDYE16A6NNV3 312 aaPredicted RBP20.28■□□□□ 0.84
CCS-203ENST00000526058 ADCY3O60266 1144 aa20.28■□□□□ 0.84
CCS-203ENST00000526058 ELNP15502 786 aa20.28■□□□□ 0.84
CCS-203ENST00000526058 EN2P19622 333 aaPredicted RBP20.28■□□□□ 0.84
CCS-203ENST00000526058 PPARAQ07869 468 aa20.28■□□□□ 0.84
CCS-203ENST00000526058 IRF5Q13568 498 aa20.28■□□□□ 0.84
CCS-203ENST00000526058 PORCNQ9H237 461 aa20.28■□□□□ 0.84
CCS-203ENST00000526058 SH2D4AQ9H788 454 aa20.28■□□□□ 0.84
CCS-203ENST00000526058 VCPKMTQ9H867 229 aa20.28■□□□□ 0.84
CCS-203ENST00000526058 BIN2Q9UBW5 565 aaPredicted RBP20.28■□□□□ 0.84
CCS-203ENST00000526058 GJD2Q9UKL4 321 aa20.28■□□□□ 0.84
CCS-203ENST00000526058 PDE4AP27815 886 aa20.27■□□□□ 0.84
CCS-203ENST00000526058 MCMDC2Q4G0Z9 681 aa20.27■□□□□ 0.84
CCS-203ENST00000526058 LBX2Q6XYB7 198 aa20.27■□□□□ 0.84
CCS-203ENST00000526058 SLAIN1Q8ND83 568 aa20.27■□□□□ 0.84
CCS-203ENST00000526058 LPAR1Q92633 364 aa20.27■□□□□ 0.84
CCS-203ENST00000526058 TANGO6Q9C0B7 1094 aa20.27■□□□□ 0.84
CCS-203ENST00000526058 BTBD7Q9P203 1132 aa20.27■□□□□ 0.84
CCS-203ENST00000526058 RABGAP1Q9Y3P9 1069 aa20.27■□□□□ 0.84
CCS-203ENST00000526058 MYH4Q9Y623 1939 aa20.26■□□□□ 0.83
CCS-203ENST00000526058 PARP14Q460N5 1801 aa20.26■□□□□ 0.83
CCS-203ENST00000526058 COG2Q14746 738 aa20.26■□□□□ 0.83
CCS-203ENST00000526058 ZNF589Q86UQ0 364 aaPredicted RBP20.26■□□□□ 0.83
CCS-203ENST00000526058 TICAM2Q86XR7 235 aa20.26■□□□□ 0.83
CCS-203ENST00000526058 ZNF444Q8N0Y2 327 aaPredicted RBP20.26■□□□□ 0.83
CCS-203ENST00000526058 PXYLP1Q8TE99 480 aa20.26■□□□□ 0.83
CCS-203ENST00000526058 SDSP20132 328 aa20.25■□□□□ 0.83
CCS-203ENST00000526058 CTDSPL2Q05D32 466 aa20.25■□□□□ 0.83
CCS-203ENST00000526058 ZNF287Q9HBT7 754 aa20.25■□□□□ 0.83
CCS-203ENST00000526058 INCENPQ9NQS7 918 aa20.25■□□□□ 0.83
CCS-203ENST00000526058 IGKV6D-41A0A0C4DH26 115 aa20.24■□□□□ 0.83
CCS-203ENST00000526058 RAD21O60216 631 aa20.24■□□□□ 0.83
CCS-203ENST00000526058 SLC3A2P08195 630 aaKnown RBP20.24■□□□□ 0.83
CCS-203ENST00000526058 CCL5P13501 91 aa20.24■□□□□ 0.83
CCS-203ENST00000526058 MAPK4P31152 587 aa20.24■□□□□ 0.83
CCS-203ENST00000526058 UBXN2AP68543 259 aa20.24■□□□□ 0.83
CCS-203ENST00000526058 PDE4BQ07343 736 aa20.24■□□□□ 0.83
CCS-203ENST00000526058 GPR142Q7Z601 462 aa20.24■□□□□ 0.83
CCS-203ENST00000526058 CCAR1Q8IX12 1150 aaKnown RBP20.24■□□□□ 0.83
CCS-203ENST00000526058 HOXC10Q9NYD6 342 aa20.24■□□□□ 0.83
CCS-203ENST00000526058 TACC3Q9Y6A5 838 aa20.24■□□□□ 0.83
CCS-203ENST00000526058 A0A0G2JMZ2 1700 aa20.23■□□□□ 0.83
CCS-203ENST00000526058 WDR46O15213 610 aaKnown RBP20.23■□□□□ 0.83
CCS-203ENST00000526058 FLOT1O75955 427 aa20.23■□□□□ 0.83
CCS-203ENST00000526058 INHAP05111 366 aa20.23■□□□□ 0.83
CCS-203ENST00000526058 CYP2B6P20813 491 aa20.23■□□□□ 0.83
CCS-203ENST00000526058 DSG3P32926 999 aa20.23■□□□□ 0.83
CCS-203ENST00000526058 ALX1Q15699 326 aa20.23■□□□□ 0.83
CCS-203ENST00000526058 FAM47AQ5JRC9 791 aa20.23■□□□□ 0.83
CCS-203ENST00000526058 GOPCQ9HD26 462 aa20.23■□□□□ 0.83
CCS-203ENST00000526058 NYAP2Q9P242 653 aa20.23■□□□□ 0.83
CCS-203ENST00000526058 FGAP02671 866 aa20.22■□□□□ 0.83
CCS-203ENST00000526058 TSPY3P0CV98 308 aa20.22■□□□□ 0.83
CCS-203ENST00000526058 TSPY8P0CW00 308 aa20.22■□□□□ 0.83
CCS-203ENST00000526058 HSPD1P10809 573 aaKnown RBP20.22■□□□□ 0.83
CCS-203ENST00000526058 CCNA1P78396 465 aa20.22■□□□□ 0.83
CCS-203ENST00000526058 SAMD1Q6SPF0 538 aaPredicted RBP20.22■□□□□ 0.83
CCS-203ENST00000526058 PLEKHH3Q7Z736 793 aa20.22■□□□□ 0.83
CCS-203ENST00000526058 ATG4CQ96DT6 458 aa20.22■□□□□ 0.83
CCS-203ENST00000526058 CEP95Q96GE4 821 aa20.22■□□□□ 0.83
CCS-203ENST00000526058 NUDT12Q9BQG2 462 aa20.22■□□□□ 0.83
CCS-203ENST00000526058 RNF208Q9H0X6 261 aa20.22■□□□□ 0.83
CCS-203ENST00000526058 UNC93B1Q9H1C4 597 aa20.22■□□□□ 0.83
CCS-203ENST00000526058 CLIP2Q9UDT6 1046 aa20.22■□□□□ 0.83
CCS-203ENST00000526058 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCS-203ENST00000526058 COL11A1P12107 1806 aaPredicted RBP20.22■□□□□ 0.83
CCS-203ENST00000526058 CCDC171Q6TFL3 1326 aa20.22■□□□□ 0.83
CCS-203ENST00000526058 TFAP4Q01664 338 aa20.21■□□□□ 0.83
CCS-203ENST00000526058 MORN1Q5T089 497 aa20.21■□□□□ 0.83
CCS-203ENST00000526058 FAM83BQ5T0W9 1011 aa20.21■□□□□ 0.83
CCS-203ENST00000526058 CWC27Q6UX04 472 aaKnown RBP20.21■□□□□ 0.83
CCS-203ENST00000526058 NEDD1Q8NHV4 660 aa20.21■□□□□ 0.83
CCS-203ENST00000526058 USP6NLQ92738 828 aa20.21■□□□□ 0.83
CCS-203ENST00000526058 FBXO28Q9NVF7 368 aa20.21■□□□□ 0.83
CCS-203ENST00000526058 MTMR4Q9NYA4 1195 aa20.21■□□□□ 0.83
CCS-203ENST00000526058 ANAPC4Q9UJX5 808 aa20.21■□□□□ 0.83
CCS-203ENST00000526058 F5H6K3 240 aa20.2■□□□□ 0.82
CCS-203ENST00000526058 KLRC3Q07444 240 aa20.2■□□□□ 0.82
CCS-203ENST00000526058 TRIM32Q13049 653 aa20.2■□□□□ 0.82
CCS-203ENST00000526058 WDR78Q5VTH9 848 aa20.2■□□□□ 0.82
CCS-203ENST00000526058 SOCS4Q8WXH5 440 aa20.2■□□□□ 0.82
CCS-203ENST00000526058 SHISA4Q96DD7 197 aa20.2■□□□□ 0.82
CCS-203ENST00000526058 NUP88Q99567 741 aaPredicted RBP20.2■□□□□ 0.82
CCS-203ENST00000526058 MOV10L1Q9BXT6 1211 aaKnown RBP20.2■□□□□ 0.82
CCS-203ENST00000526058 CWC22Q9HCG8 908 aaKnown RBP20.2■□□□□ 0.82
CCS-203ENST00000526058 PLIN4Q96Q06 1357 aa20.2■□□□□ 0.82
CCS-203ENST00000526058 HMGCRP04035 888 aa20.19■□□□□ 0.82
CCS-203ENST00000526058 GJB1P08034 283 aa20.19■□□□□ 0.82
CCS-203ENST00000526058 GSPT1P15170 499 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms