RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 ZMYM1Q5SVZ6 1142 aa12.52□□□□□ -0.41
RBBP4-216ENST00000525506 TMEM179Q6ZVK1 233 aa12.52□□□□□ -0.41
RBBP4-216ENST00000525506 C16orf86Q6ZW13 317 aa12.52□□□□□ -0.41
RBBP4-216ENST00000525506 PLEKHM2Q8IWE5 1019 aa12.52□□□□□ -0.41
RBBP4-216ENST00000525506 CCAR1Q8IX12 1150 aaKnown RBP12.52□□□□□ -0.41
RBBP4-216ENST00000525506 NKX2-3Q8TAU0 364 aa12.52□□□□□ -0.41
RBBP4-216ENST00000525506 TRIB2Q92519 343 aa12.52□□□□□ -0.41
RBBP4-216ENST00000525506 SEC62Q99442 399 aaKnown RBP12.52□□□□□ -0.41
RBBP4-216ENST00000525506 BTBD7Q9P203 1132 aa12.52□□□□□ -0.41
RBBP4-216ENST00000525506 ALPK3Q96L96 1907 aa12.52□□□□□ -0.41
RBBP4-216ENST00000525506 ROBO3Q96MS0 1386 aa12.52□□□□□ -0.41
RBBP4-216ENST00000525506 GREB1LQ9C091 1923 aaPredicted RBP12.51□□□□□ -0.41
RBBP4-216ENST00000525506 SPDYE16A6NNV3 312 aaPredicted RBP12.51□□□□□ -0.41
RBBP4-216ENST00000525506 TFRCP02786 760 aaKnown RBP12.51□□□□□ -0.41
RBBP4-216ENST00000525506 HMGCRP04035 888 aa12.51□□□□□ -0.41
RBBP4-216ENST00000525506 MAPK4P31152 587 aa12.51□□□□□ -0.41
RBBP4-216ENST00000525506 ATP2B2Q01814 1243 aa12.51□□□□□ -0.41
RBBP4-216ENST00000525506 CCL14Q16627 93 aa12.51□□□□□ -0.41
RBBP4-216ENST00000525506 SBK1Q52WX2 424 aa12.51□□□□□ -0.41
RBBP4-216ENST00000525506 WDR78Q5VTH9 848 aa12.51□□□□□ -0.41
RBBP4-216ENST00000525506 B4GALNT3Q6L9W6 998 aa12.51□□□□□ -0.41
RBBP4-216ENST00000525506 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
RBBP4-216ENST00000525506 GPR142Q7Z601 462 aa12.51□□□□□ -0.41
RBBP4-216ENST00000525506 PLEKHH3Q7Z736 793 aa12.51□□□□□ -0.41
RBBP4-216ENST00000525506 UBE2Q1Q7Z7E8 422 aa12.51□□□□□ -0.41
RBBP4-216ENST00000525506 SPICE1Q8N0Z3 855 aa12.51□□□□□ -0.41
RBBP4-216ENST00000525506 NUDT12Q9BQG2 462 aa12.51□□□□□ -0.41
RBBP4-216ENST00000525506 TANGO6Q9C0B7 1094 aa12.51□□□□□ -0.41
RBBP4-216ENST00000525506 PAK6Q9NQU5 681 aaPredicted RBP12.51□□□□□ -0.41
RBBP4-216ENST00000525506 RABGAP1Q9Y3P9 1069 aa12.51□□□□□ -0.41
RBBP4-216ENST00000525506 MINDY4BA8MYZ0 360 aa12.5□□□□□ -0.41
RBBP4-216ENST00000525506 FARP2O94887 1054 aaPredicted RBP12.5□□□□□ -0.41
RBBP4-216ENST00000525506 EEF2P13639 858 aaKnown RBP12.5□□□□□ -0.41
RBBP4-216ENST00000525506 ICA1Q05084 483 aa12.5□□□□□ -0.41
RBBP4-216ENST00000525506 MORN1Q5T089 497 aa12.5□□□□□ -0.41
RBBP4-216ENST00000525506 GTF3C2Q8WUA4 911 aaPredicted RBP12.5□□□□□ -0.41
RBBP4-216ENST00000525506 USP6NLQ92738 828 aa12.5□□□□□ -0.41
RBBP4-216ENST00000525506 DPF3Q92784 378 aa12.5□□□□□ -0.41
RBBP4-216ENST00000525506 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.5□□□□□ -0.41
RBBP4-216ENST00000525506 CWC22Q9HCG8 908 aaKnown RBP12.5□□□□□ -0.41
RBBP4-216ENST00000525506 EPB41L4AQ9HCS5 686 aaPredicted RBP12.5□□□□□ -0.41
RBBP4-216ENST00000525506 HELLSQ9NRZ9 838 aa12.5□□□□□ -0.41
RBBP4-216ENST00000525506 A0A0G2JMZ2 1700 aa12.49□□□□□ -0.41
RBBP4-216ENST00000525506 APPP05067 770 aa12.49□□□□□ -0.41
RBBP4-216ENST00000525506 IRX6P78412 446 aaPredicted RBP12.49□□□□□ -0.41
RBBP4-216ENST00000525506 DIS3LQ8TF46 1054 aaKnown RBP12.49□□□□□ -0.41
RBBP4-216ENST00000525506 SOCS4Q8WXH5 440 aa12.49□□□□□ -0.41
RBBP4-216ENST00000525506 CCDC17Q96LX7 622 aa12.49□□□□□ -0.41
RBBP4-216ENST00000525506 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.49□□□□□ -0.41
RBBP4-216ENST00000525506 NACAP1Q9BZK3 213 aa12.49□□□□□ -0.41
RBBP4-216ENST00000525506 ARHGEF10LQ9HCE6 1279 aa12.49□□□□□ -0.41
RBBP4-216ENST00000525506 TMX2Q9Y320 296 aa12.49□□□□□ -0.41
RBBP4-216ENST00000525506 ZMYM6O95789 1325 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 RPTORQ8N122 1335 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 PATL2C9JE40 543 aaKnown RBP12.48□□□□□ -0.41
RBBP4-216ENST00000525506 H0YGN5 161 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 HIP1O00291 1037 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 RAD21O60216 631 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 SLC34A2O95436 690 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 PRKAR2AP13861 404 aaKnown RBP12.48□□□□□ -0.41
RBBP4-216ENST00000525506 RASA1P20936 1047 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 TDO2P48775 406 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 CCNA1P78396 465 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 COG2Q14746 738 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 LBX2Q6XYB7 198 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 CCDC129Q6ZRS4 1044 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 CRISPLD2Q9H0B8 497 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 VCPKMTQ9H867 229 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 ZNF287Q9HBT7 754 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 HMX1Q9NP08 348 aaPredicted RBP12.48□□□□□ -0.41
RBBP4-216ENST00000525506 FLRT1Q9NZU1 646 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 FRMPD3Q5JV73 1810 aa12.48□□□□□ -0.41
RBBP4-216ENST00000525506 PRDM1O75626 825 aa12.47□□□□□ -0.41
RBBP4-216ENST00000525506 FLOT1O75955 427 aa12.47□□□□□ -0.41
RBBP4-216ENST00000525506 XRCC5P13010 732 aaKnown RBP12.47□□□□□ -0.41
RBBP4-216ENST00000525506 ZKSCAN1P17029 563 aaPredicted RBP12.47□□□□□ -0.41
RBBP4-216ENST00000525506 PTPREP23469 700 aa12.47□□□□□ -0.41
RBBP4-216ENST00000525506 RGS2P41220 211 aa12.47□□□□□ -0.41
RBBP4-216ENST00000525506 CACNB2Q08289 660 aaPredicted RBP12.47□□□□□ -0.41
RBBP4-216ENST00000525506 MAP2K5Q13163 448 aa12.47□□□□□ -0.41
RBBP4-216ENST00000525506 PLS1Q14651 629 aa12.47□□□□□ -0.41
RBBP4-216ENST00000525506 ATG4CQ96DT6 458 aa12.47□□□□□ -0.41
RBBP4-216ENST00000525506 PAWRQ96IZ0 340 aaKnown RBP12.47□□□□□ -0.41
RBBP4-216ENST00000525506 MOV10L1Q9BXT6 1211 aaKnown RBP12.47□□□□□ -0.41
RBBP4-216ENST00000525506 KANSL2Q9H9L4 492 aa12.47□□□□□ -0.41
RBBP4-216ENST00000525506 MKNK2Q9HBH9 465 aa12.47□□□□□ -0.41
RBBP4-216ENST00000525506 FBXO28Q9NVF7 368 aa12.47□□□□□ -0.41
RBBP4-216ENST00000525506 HOXC10Q9NYD6 342 aa12.47□□□□□ -0.41
RBBP4-216ENST00000525506 SMCHD1A6NHR9 2005 aa12.46□□□□□ -0.41
RBBP4-216ENST00000525506 SLC15A5A6NIM6 579 aa12.46□□□□□ -0.41
RBBP4-216ENST00000525506 TRIM6-TRIM34B2RNG4 842 aa12.46□□□□□ -0.41
RBBP4-216ENST00000525506 CCND3P30281 292 aaPredicted RBP12.46□□□□□ -0.41
RBBP4-216ENST00000525506 DSG3P32926 999 aa12.46□□□□□ -0.41
RBBP4-216ENST00000525506 MFAP1P55081 439 aaKnown RBP12.46□□□□□ -0.41
RBBP4-216ENST00000525506 MCMDC2Q4G0Z9 681 aa12.46□□□□□ -0.41
RBBP4-216ENST00000525506 MAP3K21Q5TCX8 1036 aa12.46□□□□□ -0.41
RBBP4-216ENST00000525506 CENPQQ7L2Z9 268 aaPredicted RBP12.46□□□□□ -0.41
RBBP4-216ENST00000525506 IFNL3Q8IZI9 196 aa12.46□□□□□ -0.41
RBBP4-216ENST00000525506 NPLOC4Q8TAT6 608 aa12.46□□□□□ -0.41
RBBP4-216ENST00000525506 LPAR1Q92633 364 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms