RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 USP17L8P0C7I0 530 aa18.81■□□□□ 0.6
CCDC90B-203ENST00000525503 ZNF18P17022 549 aa18.81■□□□□ 0.6
CCDC90B-203ENST00000525503 GNAQP50148 359 aa18.81■□□□□ 0.6
CCDC90B-203ENST00000525503 ATP2C1P98194 919 aaPredicted RBP18.81■□□□□ 0.6
CCDC90B-203ENST00000525503 ZNF174Q15697 407 aa18.81■□□□□ 0.6
CCDC90B-203ENST00000525503 RCSD1Q6JBY9 416 aa18.81■□□□□ 0.6
CCDC90B-203ENST00000525503 C15orf52Q6ZUT6 534 aaKnown RBP18.81■□□□□ 0.6
CCDC90B-203ENST00000525503 CERS3Q8IU89 383 aa18.81■□□□□ 0.6
CCDC90B-203ENST00000525503 CNBD1Q8NA66 436 aa18.81■□□□□ 0.6
CCDC90B-203ENST00000525503 EPSTI1Q96J88 318 aa18.81■□□□□ 0.6
CCDC90B-203ENST00000525503 CCDC94Q9BW85 323 aaPredicted RBP18.81■□□□□ 0.6
CCDC90B-203ENST00000525503 SH3GLB2Q9NR46 395 aa18.81■□□□□ 0.6
CCDC90B-203ENST00000525503 MKRN1Q9UHC7 482 aaKnown RBP18.81■□□□□ 0.6
CCDC90B-203ENST00000525503 THSD7AQ9UPZ6 1657 aa18.81■□□□□ 0.6
CCDC90B-203ENST00000525503 PPP4CP60510 307 aa18.8■□□□□ 0.6
CCDC90B-203ENST00000525503 TFAP4Q01664 338 aa18.8■□□□□ 0.6
CCDC90B-203ENST00000525503 FMR1Q06787 632 aaKnown RBP eCLIP18.8■□□□□ 0.6
CCDC90B-203ENST00000525503 SH3RF1Q7Z6J0 888 aa18.8■□□□□ 0.6
CCDC90B-203ENST00000525503 AMIGO3Q86WK7 504 aa18.8■□□□□ 0.6
CCDC90B-203ENST00000525503 PDCL2Q8N4E4 241 aa18.8■□□□□ 0.6
CCDC90B-203ENST00000525503 UBE2Q2Q8WVN8 375 aa18.8■□□□□ 0.6
CCDC90B-203ENST00000525503 PAGE5Q96GU1 130 aa18.8■□□□□ 0.6
CCDC90B-203ENST00000525503 JAG2Q9Y219 1238 aa18.8■□□□□ 0.6
CCDC90B-203ENST00000525503 ROBO3Q96MS0 1386 aa18.8■□□□□ 0.6
CCDC90B-203ENST00000525503 CCDC88AQ3V6T2 1871 aa18.8■□□□□ 0.6
CCDC90B-203ENST00000525503 PTGDRQ13258 359 aa18.8■□□□□ 0.6
CCDC90B-203ENST00000525503 TMX1Q9H3N1 280 aa18.8■□□□□ 0.6
CCDC90B-203ENST00000525503 MKNK2Q9HBH9 465 aa18.8■□□□□ 0.6
CCDC90B-203ENST00000525503 A0A087X0B3 334 aa18.79■□□□□ 0.6
CCDC90B-203ENST00000525503 NCBP1Q09161 790 aaKnown RBP18.79■□□□□ 0.6
CCDC90B-203ENST00000525503 NFIXQ14938 502 aa18.79■□□□□ 0.6
CCDC90B-203ENST00000525503 ZNF827Q17R98 1081 aa18.79■□□□□ 0.6
CCDC90B-203ENST00000525503 FCHSD1Q86WN1 690 aa18.79■□□□□ 0.6
CCDC90B-203ENST00000525503 SH3RF3Q8TEJ3 882 aaPredicted RBP18.79■□□□□ 0.6
CCDC90B-203ENST00000525503 GSDMAQ96QA5 445 aa18.79■□□□□ 0.6
CCDC90B-203ENST00000525503 TNRC6CQ9HCJ0 1690 aaKnown RBP18.79■□□□□ 0.6
CCDC90B-203ENST00000525503 TMEM232C9JQI7 657 aa18.78■□□□□ 0.6
CCDC90B-203ENST00000525503 PIK3AP1Q6ZUJ8 805 aa18.78■□□□□ 0.6
CCDC90B-203ENST00000525503 PNMA1Q8ND90 353 aa18.78■□□□□ 0.6
CCDC90B-203ENST00000525503 TCP11L1Q9NUJ3 509 aa18.78■□□□□ 0.6
CCDC90B-203ENST00000525503 VWA3AA6NCI4 1184 aa18.78■□□□□ 0.6
CCDC90B-203ENST00000525503 UBAP1LF5GYI3 381 aa18.78■□□□□ 0.6
CCDC90B-203ENST00000525503 ADRA2BP18089 450 aa18.78■□□□□ 0.6
CCDC90B-203ENST00000525503 AFMP43652 599 aa18.78■□□□□ 0.6
CCDC90B-203ENST00000525503 TBX2Q13207 712 aaPredicted RBP18.78■□□□□ 0.6
CCDC90B-203ENST00000525503 GRM4Q14833 912 aa18.78■□□□□ 0.6
CCDC90B-203ENST00000525503 IQUBQ8NA54 791 aa18.78■□□□□ 0.6
CCDC90B-203ENST00000525503 ZNF287Q9HBT7 754 aa18.78■□□□□ 0.6
CCDC90B-203ENST00000525503 INTS13Q9NVM9 706 aa18.78■□□□□ 0.6
CCDC90B-203ENST00000525503 WNT7AO00755 349 aa18.77■□□□□ 0.6
CCDC90B-203ENST00000525503 DPYDQ12882 1025 aa18.77■□□□□ 0.6
CCDC90B-203ENST00000525503 NOM1Q5C9Z4 860 aaKnown RBP18.77■□□□□ 0.6
CCDC90B-203ENST00000525503 SPATA1Q5VX52 437 aa18.77■□□□□ 0.6
CCDC90B-203ENST00000525503 ARL6IP4Q66PJ3 421 aaKnown RBP18.77■□□□□ 0.6
CCDC90B-203ENST00000525503 SPECC1LQ69YQ0 1117 aa18.77■□□□□ 0.6
CCDC90B-203ENST00000525503 BLIDQ8IZY5 108 aa18.77■□□□□ 0.6
CCDC90B-203ENST00000525503 ZNF444Q8N0Y2 327 aaPredicted RBP18.77■□□□□ 0.6
CCDC90B-203ENST00000525503 RPGRQ92834 1020 aaKnown RBP18.77■□□□□ 0.6
CCDC90B-203ENST00000525503 IL17RBQ9NRM6 502 aa18.77■□□□□ 0.6
CCDC90B-203ENST00000525503 TSPY3P0CV98 308 aa18.76■□□□□ 0.59
CCDC90B-203ENST00000525503 TSPY8P0CW00 308 aa18.76■□□□□ 0.59
CCDC90B-203ENST00000525503 FAM196AQ6ZSG2 479 aa18.76■□□□□ 0.59
CCDC90B-203ENST00000525503 TRMT44Q8IYL2 757 aaKnown RBP18.76■□□□□ 0.59
CCDC90B-203ENST00000525503 BCL11BQ9C0K0 894 aaPredicted RBP18.76■□□□□ 0.59
CCDC90B-203ENST00000525503 PCDHA4Q9UN74 947 aa18.76■□□□□ 0.59
CCDC90B-203ENST00000525503 LY75O60449 1722 aa18.76■□□□□ 0.59
CCDC90B-203ENST00000525503 FAM182BQ5T319 152 aa18.76■□□□□ 0.59
CCDC90B-203ENST00000525503 GALNT17Q6IS24 598 aa18.76■□□□□ 0.59
CCDC90B-203ENST00000525503 FAM177A1Q8N128 213 aaPredicted RBP18.76■□□□□ 0.59
CCDC90B-203ENST00000525503 SPATA31A6Q5VVP1 1343 aa18.76■□□□□ 0.59
CCDC90B-203ENST00000525503 ARHGAP6O43182 974 aa18.75■□□□□ 0.59
CCDC90B-203ENST00000525503 ZSCAN12O43309 604 aa18.75■□□□□ 0.59
CCDC90B-203ENST00000525503 ATP2B4P23634 1241 aa18.75■□□□□ 0.59
CCDC90B-203ENST00000525503 LONP1P36776 959 aaKnown RBP18.75■□□□□ 0.59
CCDC90B-203ENST00000525503 SLC4A8Q2Y0W8 1093 aa18.75■□□□□ 0.59
CCDC90B-203ENST00000525503 DYNLL2Q96FJ2 89 aa18.75■□□□□ 0.59
CCDC90B-203ENST00000525503 ERO1AQ96HE7 468 aa18.75■□□□□ 0.59
CCDC90B-203ENST00000525503 LZTS2Q9BRK4 669 aa18.75■□□□□ 0.59
CCDC90B-203ENST00000525503 CGNQ9P2M7 1197 aaKnown RBP18.75■□□□□ 0.59
CCDC90B-203ENST00000525503 TAF1LQ8IZX4 1826 aa18.75■□□□□ 0.59
CCDC90B-203ENST00000525503 SYNRGQ9UMZ2 1314 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 MCM7P33993 719 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 CUL4BQ13620 913 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 DIXDC1Q155Q3 683 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 HSP90AA4PQ58FG1 418 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 CCDC148Q8NFR7 591 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 TGFBRAP1Q8WUH2 860 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 MED15Q96RN5 788 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 SAMSN1Q9NSI8 373 aaKnown RBP18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 A0A1B0GTH6 734 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 SLU7O95391 586 aaKnown RBP18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 TXLNAP40222 546 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 NR1I3Q14994 352 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 E2F4Q16254 413 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 PPP4R3BQ5MIZ7 849 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 HOMER1Q86YM7 354 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 CERKQ8TCT0 537 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 CTAGE1Q96RT6 745 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 MAD2L2Q9UI95 211 aa18.74■□□□□ 0.59
CCDC90B-203ENST00000525503 STX10O60499 249 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms