RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 TRIM22Q8IYM9 498 aa13.63□□□□□ -0.23
CSTF3-205ENST00000524775 LEO1Q8WVC0 666 aaPredicted RBP13.63□□□□□ -0.23
CSTF3-205ENST00000524775 MKL1Q969V6 931 aa13.63□□□□□ -0.23
CSTF3-205ENST00000524775 STX8Q9UNK0 236 aa13.63□□□□□ -0.23
CSTF3-205ENST00000524775 SMCHD1A6NHR9 2005 aa13.63□□□□□ -0.23
CSTF3-205ENST00000524775 hCG_1642624A0A1W2PR95 340 aa13.62□□□□□ -0.23
CSTF3-205ENST00000524775 FIBPO43427 364 aa13.62□□□□□ -0.23
CSTF3-205ENST00000524775 MMP1P03956 469 aa13.62□□□□□ -0.23
CSTF3-205ENST00000524775 SMARCA1P28370 1054 aa13.62□□□□□ -0.23
CSTF3-205ENST00000524775 KIF5BP33176 963 aa13.62□□□□□ -0.23
CSTF3-205ENST00000524775 EIF6P56537 245 aaKnown RBP13.62□□□□□ -0.23
CSTF3-205ENST00000524775 CERKLQ49MI3 558 aaPredicted RBP13.62□□□□□ -0.23
CSTF3-205ENST00000524775 ARHGAP27Q6ZUM4 889 aa13.62□□□□□ -0.23
CSTF3-205ENST00000524775 BRAPQ7Z569 592 aa13.62□□□□□ -0.23
CSTF3-205ENST00000524775 USP28Q96RU2 1077 aa13.62□□□□□ -0.23
CSTF3-205ENST00000524775 PHF20Q9BVI0 1012 aa13.62□□□□□ -0.23
CSTF3-205ENST00000524775 CNOT7Q9UIV1 285 aaKnown RBP13.62□□□□□ -0.23
CSTF3-205ENST00000524775 KCNJ14Q9UNX9 436 aa13.62□□□□□ -0.23
CSTF3-205ENST00000524775 DDX49Q9Y6V7 483 aaKnown RBP13.62□□□□□ -0.23
CSTF3-205ENST00000524775 USP17L5A8MUK1 530 aa13.61□□□□□ -0.23
CSTF3-205ENST00000524775 TBC1D12O60347 775 aa13.61□□□□□ -0.23
CSTF3-205ENST00000524775 TTLL1O95922 423 aa13.61□□□□□ -0.23
CSTF3-205ENST00000524775 PDHBP11177 359 aa13.61□□□□□ -0.23
CSTF3-205ENST00000524775 YBX3P16989 372 aaKnown RBP eCLIP13.61□□□□□ -0.23
CSTF3-205ENST00000524775 LMNB1P20700 586 aa13.61□□□□□ -0.23
CSTF3-205ENST00000524775 GNAQP50148 359 aa13.61□□□□□ -0.23
CSTF3-205ENST00000524775 UBE2HP62256 183 aa13.61□□□□□ -0.23
CSTF3-205ENST00000524775 PFKFB3Q16875 520 aaPredicted RBP13.61□□□□□ -0.23
CSTF3-205ENST00000524775 ZSCAN29Q8IWY8 852 aaPredicted RBP13.61□□□□□ -0.23
CSTF3-205ENST00000524775 MICALL2Q8IY33 904 aa13.61□□□□□ -0.23
CSTF3-205ENST00000524775 PGBD1Q96JS3 809 aa13.61□□□□□ -0.23
CSTF3-205ENST00000524775 TEPSINQ96N21 525 aa13.61□□□□□ -0.23
CSTF3-205ENST00000524775 SPZ1Q9BXG8 430 aa13.61□□□□□ -0.23
CSTF3-205ENST00000524775 FTOQ9C0B1 505 aaKnown RBP eCLIP13.61□□□□□ -0.23
CSTF3-205ENST00000524775 SCAND2PQ9GZW5 306 aaPredicted RBP13.61□□□□□ -0.23
CSTF3-205ENST00000524775 RTEL1Q9NZ71 1219 aa13.61□□□□□ -0.23
CSTF3-205ENST00000524775 TMOD2Q9NZR1 351 aa13.61□□□□□ -0.23
CSTF3-205ENST00000524775 NYAP2Q9P242 653 aa13.61□□□□□ -0.23
CSTF3-205ENST00000524775 CLIP2Q9UDT6 1046 aa13.61□□□□□ -0.23
CSTF3-205ENST00000524775 HERC5Q9UII4 1024 aaKnown RBP13.61□□□□□ -0.23
CSTF3-205ENST00000524775 ASTN2O75129 1339 aaPredicted RBP13.61□□□□□ -0.23
CSTF3-205ENST00000524775 ADAMTS3O15072 1205 aa13.6□□□□□ -0.23
CSTF3-205ENST00000524775 MBD3O95983 291 aa13.6□□□□□ -0.23
CSTF3-205ENST00000524775 NCLP19338 710 aaKnown RBP13.6□□□□□ -0.23
CSTF3-205ENST00000524775 GSE1Q14687 1217 aa13.6□□□□□ -0.23
CSTF3-205ENST00000524775 SEPT2Q15019 361 aa13.6□□□□□ -0.23
CSTF3-205ENST00000524775 MYSM1Q5VVJ2 828 aa13.6□□□□□ -0.23
CSTF3-205ENST00000524775 USP17L2Q6R6M4 530 aa13.6□□□□□ -0.23
CSTF3-205ENST00000524775 SAMD7Q7Z3H4 446 aa13.6□□□□□ -0.23
CSTF3-205ENST00000524775 OXER1Q8TDS5 423 aa13.6□□□□□ -0.23
CSTF3-205ENST00000524775 TNFRSF25Q93038 417 aa13.6□□□□□ -0.23
CSTF3-205ENST00000524775 CSRNP1Q96S65 589 aa13.6□□□□□ -0.23
CSTF3-205ENST00000524775 LZTS2Q9BRK4 669 aa13.6□□□□□ -0.23
CSTF3-205ENST00000524775 TMEM39BQ9GZU3 492 aa13.6□□□□□ -0.23
CSTF3-205ENST00000524775 TMEM63CQ9P1W3 806 aa13.6□□□□□ -0.23
CSTF3-205ENST00000524775 RBM27Q9P2N5 1060 aaKnown RBP13.6□□□□□ -0.23
CSTF3-205ENST00000524775 GJA3Q9Y6H8 435 aa13.6□□□□□ -0.23
CSTF3-205ENST00000524775 PHIPQ8WWQ0 1821 aa13.6□□□□□ -0.23
CSTF3-205ENST00000524775 BTBD18B2RXH4 712 aa13.59□□□□□ -0.23
CSTF3-205ENST00000524775 KLRF2D3W0D1 207 aa13.59□□□□□ -0.23
CSTF3-205ENST00000524775 PARP1P09874 1014 aaKnown RBP13.59□□□□□ -0.23
CSTF3-205ENST00000524775 GOLGA8HP0CJ92 632 aa13.59□□□□□ -0.23
CSTF3-205ENST00000524775 SCG2P13521 617 aa13.59□□□□□ -0.23
CSTF3-205ENST00000524775 EEF2P13639 858 aaKnown RBP13.59□□□□□ -0.23
CSTF3-205ENST00000524775 NASPP49321 788 aaPredicted RBP13.59□□□□□ -0.23
CSTF3-205ENST00000524775 TOB1P50616 345 aaPredicted RBP13.59□□□□□ -0.23
CSTF3-205ENST00000524775 CSPP1Q1MSJ5 1256 aa13.59□□□□□ -0.23
CSTF3-205ENST00000524775 ABCB5Q2M3G0 1257 aa13.59□□□□□ -0.23
CSTF3-205ENST00000524775 TMEM179Q6ZVK1 233 aa13.59□□□□□ -0.23
CSTF3-205ENST00000524775 LRRC47Q8N1G4 583 aaKnown RBP13.59□□□□□ -0.23
CSTF3-205ENST00000524775 SPATA32Q96LK8 384 aa13.59□□□□□ -0.23
CSTF3-205ENST00000524775 ZNF396Q96N95 335 aaPredicted RBP13.59□□□□□ -0.23
CSTF3-205ENST00000524775 FOXP1Q9H334 677 aaPredicted RBP13.59□□□□□ -0.23
CSTF3-205ENST00000524775 CPVLQ9H3G5 476 aa13.59□□□□□ -0.23
CSTF3-205ENST00000524775 RIOX1Q9H6W3 641 aa13.59□□□□□ -0.23
CSTF3-205ENST00000524775 KANSL2Q9H9L4 492 aa13.59□□□□□ -0.23
CSTF3-205ENST00000524775 VEZTQ9HBM0 779 aa13.59□□□□□ -0.23
CSTF3-205ENST00000524775 VPS54Q9P1Q0 977 aa13.59□□□□□ -0.23
CSTF3-205ENST00000524775 CFAP45Q9UL16 551 aa13.59□□□□□ -0.23
CSTF3-205ENST00000524775 CLIC4Q9Y696 253 aa13.59□□□□□ -0.23
CSTF3-205ENST00000524775 GDF11O95390 407 aa13.58□□□□□ -0.24
CSTF3-205ENST00000524775 AKAP17AQ02040 695 aaKnown RBP13.58□□□□□ -0.24
CSTF3-205ENST00000524775 ZNF543Q08ER8 600 aa13.58□□□□□ -0.24
CSTF3-205ENST00000524775 TRIM29Q14134 588 aa13.58□□□□□ -0.24
CSTF3-205ENST00000524775 TBC1D10BQ4KMP7 808 aaPredicted RBP13.58□□□□□ -0.24
CSTF3-205ENST00000524775 TYW1BQ6NUM6 668 aa13.58□□□□□ -0.24
CSTF3-205ENST00000524775 DIS3L2Q8IYB7 885 aaKnown RBP13.58□□□□□ -0.24
CSTF3-205ENST00000524775 GPC2Q8N158 579 aa13.58□□□□□ -0.24
CSTF3-205ENST00000524775 LINC00301Q8NCQ3 95 aa13.58□□□□□ -0.24
CSTF3-205ENST00000524775 GZF1Q9H116 711 aaPredicted RBP13.58□□□□□ -0.24
CSTF3-205ENST00000524775 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.58□□□□□ -0.24
CSTF3-205ENST00000524775 SH3GLB2Q9NR46 395 aa13.58□□□□□ -0.24
CSTF3-205ENST00000524775 POLR3EQ9NVU0 708 aa13.58□□□□□ -0.24
CSTF3-205ENST00000524775 GPRC5DQ9NZD1 345 aa13.58□□□□□ -0.24
CSTF3-205ENST00000524775 DOCK1Q14185 1865 aa13.58□□□□□ -0.24
CSTF3-205ENST00000524775 PHF20L1A8MW92 1017 aa13.57□□□□□ -0.24
CSTF3-205ENST00000524775 M0R2N6 131 aa13.57□□□□□ -0.24
CSTF3-205ENST00000524775 MPHOSPH10O00566 681 aaKnown RBP13.57□□□□□ -0.24
CSTF3-205ENST00000524775 MYO1BO43795 1136 aa13.57□□□□□ -0.24
CSTF3-205ENST00000524775 GH2P01242 217 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms