RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 IGHA2P01877 340 aa11.64□□□□□ -0.55
CNKSR1-209ENST00000524529 NEFLP07196 543 aa11.64□□□□□ -0.55
CNKSR1-209ENST00000524529 AKR1B1P15121 316 aa11.64□□□□□ -0.55
CNKSR1-209ENST00000524529 CAPN2P17655 700 aa11.64□□□□□ -0.55
CNKSR1-209ENST00000524529 USP14P54578 494 aa11.64□□□□□ -0.55
CNKSR1-209ENST00000524529 MAP2K5Q13163 448 aa11.64□□□□□ -0.55
CNKSR1-209ENST00000524529 LHX8Q68G74 356 aa11.64□□□□□ -0.55
CNKSR1-209ENST00000524529 NECAB2Q7Z6G3 386 aa11.64□□□□□ -0.55
CNKSR1-209ENST00000524529 ANKLE1Q8NAG6 615 aa11.64□□□□□ -0.55
CNKSR1-209ENST00000524529 NPLOC4Q8TAT6 608 aa11.64□□□□□ -0.55
CNKSR1-209ENST00000524529 PUS7LQ9H0K6 701 aaKnown RBP11.64□□□□□ -0.55
CNKSR1-209ENST00000524529 NR2E3Q9Y5X4 410 aa11.64□□□□□ -0.55
CNKSR1-209ENST00000524529 ZNF236Q9UL36 1845 aa11.64□□□□□ -0.55
CNKSR1-209ENST00000524529 MPHOSPH10O00566 681 aaKnown RBP11.63□□□□□ -0.55
CNKSR1-209ENST00000524529 ZKSCAN1P17029 563 aaPredicted RBP11.63□□□□□ -0.55
CNKSR1-209ENST00000524529 PTPREP23469 700 aa11.63□□□□□ -0.55
CNKSR1-209ENST00000524529 RGS2P41220 211 aa11.63□□□□□ -0.55
CNKSR1-209ENST00000524529 IRX6P78412 446 aaPredicted RBP11.63□□□□□ -0.55
CNKSR1-209ENST00000524529 GRB14Q14449 540 aa11.63□□□□□ -0.55
CNKSR1-209ENST00000524529 C12orf60Q5U649 245 aa11.63□□□□□ -0.55
CNKSR1-209ENST00000524529 APBA2Q99767 749 aa11.63□□□□□ -0.55
CNKSR1-209ENST00000524529 STAP2Q9UGK3 403 aa11.63□□□□□ -0.55
CNKSR1-209ENST00000524529 A0A0C4DFX4 3053 aa11.63□□□□□ -0.55
CNKSR1-209ENST00000524529 MYH4Q9Y623 1939 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 PLXNA1Q9UIW2 1896 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 USP17L12C9JPN9 530 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 USP17L21D6R901 530 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 SOX1O00570 391 aaPredicted RBP11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 COL6A1P12109 1028 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 CDK8P49336 464 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 UBE3CQ15386 1083 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 ERICH6BQ5W0A0 696 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 TMEM179Q6ZVK1 233 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 C7orf61Q8IZ16 206 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 MOV10L1Q9BXT6 1211 aaKnown RBP11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 LRRCC1Q9C099 1032 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 NBPF3Q9H094 633 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 RWDD1Q9H446 243 aaPredicted RBP11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 C11orf49Q9H6J7 331 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 ATP8A2Q9NTI2 1148 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 ZMYND8Q9ULU4 1186 aaPredicted RBP11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 CUL9Q8IWT3 2517 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 DNAH12Q6ZR08 3092 aa11.62□□□□□ -0.55
CNKSR1-209ENST00000524529 SLC15A5A6NIM6 579 aa11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 HOXC6P09630 235 aa11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 HDAC1Q13547 482 aaPredicted RBP11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 COG2Q14746 738 aa11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 WDR78Q5VTH9 848 aa11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 TSHZ3Q63HK5 1081 aa11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 CTR9Q6PD62 1173 aa11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 C16orf86Q6ZW13 317 aa11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 CCAR1Q8IX12 1150 aaKnown RBP11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 TRMT44Q8IYL2 757 aaKnown RBP11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 TRPV1Q8NER1 839 aa11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 GDF15Q99988 308 aa11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 DCTPP1Q9H773 170 aa11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 SWAP70Q9UH65 585 aa11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 TMX2Q9Y320 296 aa11.61□□□□□ -0.55
CNKSR1-209ENST00000524529 COBLO75128 1261 aa11.6□□□□□ -0.55
CNKSR1-209ENST00000524529 DSG3P32926 999 aa11.6□□□□□ -0.55
CNKSR1-209ENST00000524529 CYP2C19P33261 490 aa11.6□□□□□ -0.55
CNKSR1-209ENST00000524529 CCNA1P78396 465 aa11.6□□□□□ -0.55
CNKSR1-209ENST00000524529 ICA1Q05084 483 aa11.6□□□□□ -0.55
CNKSR1-209ENST00000524529 SPICE1Q8N0Z3 855 aa11.6□□□□□ -0.55
CNKSR1-209ENST00000524529 OSBP2Q969R2 916 aa11.6□□□□□ -0.55
CNKSR1-209ENST00000524529 ATG4CQ96DT6 458 aa11.6□□□□□ -0.55
CNKSR1-209ENST00000524529 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.6□□□□□ -0.55
CNKSR1-209ENST00000524529 SPATC1LQ9H0A9 340 aa11.6□□□□□ -0.55
CNKSR1-209ENST00000524529 VCPKMTQ9H867 229 aa11.6□□□□□ -0.55
CNKSR1-209ENST00000524529 SLC4A4Q9Y6R1 1079 aa11.6□□□□□ -0.55
CNKSR1-209ENST00000524529 EEF2P13639 858 aaKnown RBP11.59□□□□□ -0.55
CNKSR1-209ENST00000524529 SYN1P17600 705 aa11.59□□□□□ -0.55
CNKSR1-209ENST00000524529 ERCC3P19447 782 aa11.59□□□□□ -0.55
CNKSR1-209ENST00000524529 ADORA2AP29274 412 aa11.59□□□□□ -0.55
CNKSR1-209ENST00000524529 LRRC26Q2I0M4 334 aa11.59□□□□□ -0.55
CNKSR1-209ENST00000524529 LRCH3Q96II8 777 aa11.59□□□□□ -0.55
CNKSR1-209ENST00000524529 STRBPQ96SI9 672 aaKnown RBP11.59□□□□□ -0.55
CNKSR1-209ENST00000524529 TANGO6Q9C0B7 1094 aa11.59□□□□□ -0.55
CNKSR1-209ENST00000524529 ECHDC1Q9NTX5 307 aa11.59□□□□□ -0.55
CNKSR1-209ENST00000524529 FBXO28Q9NVF7 368 aa11.59□□□□□ -0.55
CNKSR1-209ENST00000524529 MCM3APO60318 1980 aa11.59□□□□□ -0.55
CNKSR1-209ENST00000524529 GSG1L2A8MUP6 293 aa11.58□□□□□ -0.56
CNKSR1-209ENST00000524529 CYBAP13498 195 aa11.58□□□□□ -0.56
CNKSR1-209ENST00000524529 TMEM132BQ14DG7 1078 aa11.58□□□□□ -0.56
CNKSR1-209ENST00000524529 MFSD14CQ5VZR4 134 aa11.58□□□□□ -0.56
CNKSR1-209ENST00000524529 KBTBD3Q8NAB2 608 aa11.58□□□□□ -0.56
CNKSR1-209ENST00000524529 LPAR1Q92633 364 aa11.58□□□□□ -0.56
CNKSR1-209ENST00000524529 CCDC17Q96LX7 622 aa11.58□□□□□ -0.56
CNKSR1-209ENST00000524529 ARHGEF10LQ9HCE6 1279 aa11.58□□□□□ -0.56
CNKSR1-209ENST00000524529 CWC22Q9HCG8 908 aaKnown RBP11.58□□□□□ -0.56
CNKSR1-209ENST00000524529 EPB41L4AQ9HCS5 686 aaPredicted RBP11.58□□□□□ -0.56
CNKSR1-209ENST00000524529 HOXC10Q9NYD6 342 aa11.58□□□□□ -0.56
CNKSR1-209ENST00000524529 DDX20Q9UHI6 824 aaKnown RBP11.58□□□□□ -0.56
CNKSR1-209ENST00000524529 ADAMTS5Q9UNA0 930 aa11.58□□□□□ -0.56
CNKSR1-209ENST00000524529 A0A1W2PPC1 479 aa11.57□□□□□ -0.56
CNKSR1-209ENST00000524529 M0R2C6 588 aa11.57□□□□□ -0.56
CNKSR1-209ENST00000524529 WDR46O15213 610 aaKnown RBP11.57□□□□□ -0.56
CNKSR1-209ENST00000524529 FLOT1O75955 427 aa11.57□□□□□ -0.56
CNKSR1-209ENST00000524529 GLRX3O76003 335 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms