RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	ANKRD2	Q9GZV1	360 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	DNAJC25	Q9H1X3	360 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	BOLA2	Q9H3K6	86 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	MYOZ2	Q9NPC6	264 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	NRBP1	Q9UHY1	535 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	DBNL	Q9UJU6	430 aa	Known RBP	9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	FPGT-TNNI3K	V9GXZ4	949 aa		9.09	□□□□□ -0.95
SPIDR-223	ENST00000524033	DUOX1	Q9NRD9	1551 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	CA12	O43570	354 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	CTDNEP1	O95476	244 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	CCZ1B	P86790	482 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	CCZ1	P86791	482 aa	Predicted RBP	9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	EXOSC10	Q01780	885 aa	Known RBP	9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	PTPN12	Q05209	780 aa	Known RBP	9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	NOG	Q13253	232 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	IFIT5	Q13325	482 aa	Known RBP	9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	CAMK4	Q16566	473 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	STX1A	Q16623	288 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	ANGEL2	Q5VTE6	544 aa	Known RBP	9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	NEK1	Q96PY6	1258 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	HAUS7	Q99871	368 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	COA1	Q9GZY4	146 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	GOLPH3L	Q9H4A5	285 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	GBA2	Q9HCG7	927 aa	Predicted RBP	9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	FAM53C	Q9NYF3	392 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	GGA3	Q9NZ52	723 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	TFIP11	Q9UBB9	837 aa	Known RBP	9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	LIMD1	Q9UGP4	676 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	CTNNA3	Q9UI47	895 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	HPS5	Q9UPZ3	1129 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	PAXBP1	Q9Y5B6	917 aa		9.08	□□□□□ -0.96
SPIDR-223	ENST00000524033	ZNF804B	A4D1E1	1349 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	ASTN2	O75129	1339 aa	Predicted RBP	9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	NEDD4	P46934	1319 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	ANKRD18B	A2A2Z9	1011 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	SPTLC1	O15269	473 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	HR	O43593	1189 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	KIF20A	O95235	890 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	CYP21A2	P08686	494 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	FDX1	P10109	184 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	TNNT1	P13805	278 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	ZNF157	P51786	506 aa	Predicted RBP	9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	FOXO4	P98177	505 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	SCRN1	Q12765	414 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	DACT2	Q5SW24	774 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	STRIP1	Q5VSL9	837 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	TTLL5	Q6EMB2	1281 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	RGMB	Q6NW40	437 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033		Q6ZUG5	572 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	TXNRD3	Q86VQ6	643 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	FBXL16	Q8N461	479 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	BICD2	Q8TD16	824 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	EDC3	Q96F86	508 aa	Known RBP	9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	DSCC1	Q9BVC3	393 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	MXD3	Q9BW11	206 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	PRR14	Q9BWN1	585 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	TRIM5	Q9C035	493 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	OGFR	Q9NZT2	677 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	CLIP2	Q9UDT6	1046 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	CHMP3	Q9Y3E7	222 aa		9.07	□□□□□ -0.96
SPIDR-223	ENST00000524033	HOXA2	O43364	376 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	U2AF2	P26368	475 aa	Known RBP eCLIP	9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	KCNJ6	P48051	423 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	MMP14	P50281	582 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	BCAM	P50895	628 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	EVC	P57679	992 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	CBX1	P83916	185 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	GABPB1	Q06547	395 aa	Predicted RBP	9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	CHRND	Q07001	517 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	SNW1	Q13573	536 aa	Known RBP	9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	CCDC57	Q2TAC2	916 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	NBPF9	Q3BBW0	867 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	SLFNL1	Q499Z3	407 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	LMBR1L	Q6UX01	489 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	LRRC8A	Q8IWT6	810 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	DHX40	Q8IX18	779 aa	Known RBP	9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	HELB	Q8NG08	1087 aa	Predicted RBP	9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	CDCA5	Q96FF9	252 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	OSBPL5	Q9H0X9	879 aa	Predicted RBP	9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	GPR108	Q9NPR9	543 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	CGN	Q9P2M7	1197 aa	Known RBP	9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	DDX41	Q9UJV9	622 aa	Known RBP	9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	CFAP45	Q9UL16	551 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	COL4A1	P02462	1669 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	ANKRD36C	Q5JPF3	1778 aa		9.06	□□□□□ -0.96
SPIDR-223	ENST00000524033	ARAP2	Q8WZ64	1704 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	AKAP11	Q9UKA4	1901 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	PTPDC1	A2A3K4	754 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	GOLGA6L4	A6NEF3	574 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	FAM155A	B1AL88	458 aa	Predicted RBP	9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	SNAP23	O00161	211 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	HMGB1	P09429	215 aa	Known RBP	9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	KLRK1	P26718	216 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	GTF2I	P78347	998 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	FUT2	Q10981	343 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	TFCP2	Q12800	502 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	STK3	Q13188	491 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	MCMDC2	Q4G0Z9	681 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	TAF7L	Q5H9L4	462 aa		9.05	□□□□□ -0.96
SPIDR-223	ENST00000524033	ZMYM1	Q5SVZ6	1142 aa		9.05	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms