RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 PHKA2P46019 1235 aa4.91□□□□□ -1.62
NPM1-210ENST00000523339 EIF4A1P60842 406 aaKnown RBP4.91□□□□□ -1.62
NPM1-210ENST00000523339 CENPCQ03188 943 aa4.91□□□□□ -1.62
NPM1-210ENST00000523339 CLN3Q13286 438 aa4.91□□□□□ -1.62
NPM1-210ENST00000523339 VGLL4Q14135 290 aa4.91□□□□□ -1.62
NPM1-210ENST00000523339 SF3B3Q15393 1217 aaKnown RBP4.91□□□□□ -1.62
NPM1-210ENST00000523339 CFAP100Q494V2 611 aa4.91□□□□□ -1.62
NPM1-210ENST00000523339 FAM109BQ6ICB4 259 aaPredicted RBP4.91□□□□□ -1.62
NPM1-210ENST00000523339 UBE2Q1Q7Z7E8 422 aa4.91□□□□□ -1.62
NPM1-210ENST00000523339 DIS3LQ8TF46 1054 aaKnown RBP4.91□□□□□ -1.62
NPM1-210ENST00000523339 CDC5LQ99459 802 aaKnown RBP4.91□□□□□ -1.62
NPM1-210ENST00000523339 PARK7Q99497 189 aaKnown RBP4.91□□□□□ -1.62
NPM1-210ENST00000523339 SEC31BQ9NQW1 1179 aa4.91□□□□□ -1.62
NPM1-210ENST00000523339 DUOX1Q9NRD9 1551 aa4.91□□□□□ -1.62
NPM1-210ENST00000523339 TCP10L2B9ZVM9 353 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 BTBD19C9JJ37 291 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 OIP5O43482 229 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 F11P03951 625 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 MX2P20592 715 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 ERO1BQ86YB8 467 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 SMCR8Q8TEV9 937 aaPredicted RBP4.9□□□□□ -1.63
NPM1-210ENST00000523339 COA7Q96BR5 231 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 HOOK2Q96ED9 719 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 SNX27Q96L92 541 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 WRNIP1Q96S55 665 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 UHRF1Q96T88 793 aaPredicted RBP4.9□□□□□ -1.63
NPM1-210ENST00000523339 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.9□□□□□ -1.634e-16■□□□□ 10.1
NPM1-210ENST00000523339 SUV39H2Q9H5I1 410 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 ARHGEF10LQ9HCE6 1279 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 ZCCHC17Q9NP64 241 aaKnown RBP4.9□□□□□ -1.63
NPM1-210ENST00000523339 TIMMDC1Q9NPL8 285 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 ENAMQ9NRM1 1142 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 KCNH4Q9UQ05 1017 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 ZNF804BA4D1E1 1349 aa4.9□□□□□ -1.63
NPM1-210ENST00000523339 SPTBN5Q9NRC6 3674 aaKnown RBP4.9□□□□□ -1.63
NPM1-210ENST00000523339 IGHMBP2P38935 993 aaKnown RBP4.89□□□□□ -1.63
NPM1-210ENST00000523339 FLT3LGP49771 235 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 CCT4P50991 539 aaKnown RBP4.89□□□□□ -1.63
NPM1-210ENST00000523339 CTBSQ01459 385 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 PROSER3Q2NL68 480 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 TMEM259Q4ZIN3 620 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 C17orf99Q6UX52 265 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 LINC00114Q6XXX2 140 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 ALYREFQ86V81 257 aaKnown RBP4.89□□□□□ -1.63
NPM1-210ENST00000523339 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.89□□□□□ -1.63
NPM1-210ENST00000523339 GALNT6Q8NCL4 622 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 ADAMTS19Q8TE59 1207 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 MPHOSPH8Q99549 860 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 NUCKS1Q9H1E3 243 aaKnown RBP4.89□□□□□ -1.63
NPM1-210ENST00000523339 SEMA6BQ9H3T3 888 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 SNRKQ9NRH2 765 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 TMOD2Q9NZR1 351 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 PCDHB11Q9Y5F2 797 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 ADGRA2Q96PE1 1338 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 MAPK8IP3Q9UPT6 1336 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 MED23Q9ULK4 1368 aa4.89□□□□□ -1.63
NPM1-210ENST00000523339 DDX60Q8IY21 1712 aaKnown RBP4.89□□□□□ -1.63
NPM1-210ENST00000523339 POLR2AP24928 1970 aaKnown RBP4.88□□□□□ -1.63
NPM1-210ENST00000523339 H7C1W4 665 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 NR1H3Q13133 447 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 PPIL2Q13356 520 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 DCAF15Q66K64 600 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 FOXR1Q6PIV2 292 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.88□□□□□ -1.63
NPM1-210ENST00000523339 ANKRD23Q86SG2 305 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 CCAR1Q8IX12 1150 aaKnown RBP4.88□□□□□ -1.63
NPM1-210ENST00000523339 ZBTB38Q8NAP3 1195 aaPredicted RBP4.88□□□□□ -1.63
NPM1-210ENST00000523339 MTMR14Q8NCE2 650 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 PLBD2Q8NHP8 589 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 ZKSCAN4Q969J2 545 aaPredicted RBP4.88□□□□□ -1.63
NPM1-210ENST00000523339 XAGE2Q96GT9 111 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 PRMT6Q96LA8 375 aaPredicted RBP4.88□□□□□ -1.63
NPM1-210ENST00000523339 ANKRD2Q9GZV1 360 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 CWC22Q9HCG8 908 aaKnown RBP4.88□□□□□ -1.63
NPM1-210ENST00000523339 GPAMQ9HCL2 828 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 PRDM5Q9NQX1 630 aaPredicted RBP4.88□□□□□ -1.63
NPM1-210ENST00000523339 CEP126Q9P2H0 1117 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 THEGQ9P2T0 379 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 GABRQQ9UN88 632 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 JAG2Q9Y219 1238 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 LEMD3Q9Y2U8 911 aa4.88□□□□□ -1.63
NPM1-210ENST00000523339 LAS1LQ9Y4W2 734 aaKnown RBP4.88□□□□□ -1.63
NPM1-210ENST00000523339 TTC28Q96AY4 2481 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 PHF20L1A8MW92 1017 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 PDE8AO60658 829 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 HMGCRP04035 888 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 CYP2C8P10632 490 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 ITGB7P26010 798 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 CTGFP29279 349 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 MRPS5P82675 430 aaKnown RBP4.87□□□□□ -1.63
NPM1-210ENST00000523339 PPATQ06203 517 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 WDR44Q5JSH3 913 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 HDGFL1Q5TGJ6 251 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 GADL1Q6ZQY3 521 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 TAS1R3Q7RTX0 852 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 ZNF804AQ7Z570 1209 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 PNMA1Q8ND90 353 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.87□□□□□ -1.63
NPM1-210ENST00000523339 ATXN2LQ8WWM7 1075 aaKnown RBP4.87□□□□□ -1.63
NPM1-210ENST00000523339 JARID2Q92833 1246 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 226.1 ms