RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 MYH8P13535 1937 aa27.61■■■□□ 2.01
PVT1-218ENST00000523328 MAGEB6P1A0A0J9YX57 407 aa27.6■■■□□ 2.01
PVT1-218ENST00000523328 STRNO43815 780 aa27.6■■■□□ 2.01
PVT1-218ENST00000523328 GJC2Q5T442 439 aaPredicted RBP27.6■■■□□ 2.01
PVT1-218ENST00000523328 DPP9Q86TI2 863 aa27.6■■■□□ 2.01
PVT1-218ENST00000523328 SPATC1LQ9H0A9 340 aa27.6■■■□□ 2.01
PVT1-218ENST00000523328 HOXC10Q9NYD6 342 aa27.6■■■□□ 2.01
PVT1-218ENST00000523328 EXOC6BQ9Y2D4 811 aa27.6■■■□□ 2.01
PVT1-218ENST00000523328 PARP14Q460N5 1801 aa27.6■■■□□ 2.01
PVT1-218ENST00000523328 ZNFX1Q9P2E3 1918 aaKnown RBP27.59■■■□□ 2.01
PVT1-218ENST00000523328 KIAA1755Q5JYT7 1200 aa27.59■■■□□ 2.01
PVT1-218ENST00000523328 SHCBP1Q8NEM2 672 aa27.59■■■□□ 2.01
PVT1-218ENST00000523328 PRKAG2Q9UGJ0 569 aa27.59■■■□□ 2.01
PVT1-218ENST00000523328 COBLO75128 1261 aa27.58■■■□□ 2.01
PVT1-218ENST00000523328 ERCC3P19447 782 aa27.58■■■□□ 2.01
PVT1-218ENST00000523328 ARRDC4Q8NCT1 418 aa27.58■■■□□ 2.01
PVT1-218ENST00000523328 CRNKL1Q9BZJ0 848 aaKnown RBP27.58■■■□□ 2.01
PVT1-218ENST00000523328 TANGO6Q9C0B7 1094 aa27.58■■■□□ 2.01
PVT1-218ENST00000523328 MCM9Q9NXL9 1143 aa27.58■■■□□ 2.01
PVT1-218ENST00000523328 MPHOSPH10O00566 681 aaKnown RBP27.57■■■□□ 2
PVT1-218ENST00000523328 PDE6AP16499 860 aa27.57■■■□□ 2
PVT1-218ENST00000523328 TTF1Q15361 905 aaPredicted RBP27.57■■■□□ 2
PVT1-218ENST00000523328 SLC9C2Q5TAH2 1124 aa27.57■■■□□ 2
PVT1-218ENST00000523328 ANO1Q5XXA6 986 aa27.57■■■□□ 2
PVT1-218ENST00000523328 SLC39A5Q6ZMH5 540 aa27.57■■■□□ 2
PVT1-218ENST00000523328 ERC1Q8IUD2 1116 aa27.57■■■□□ 2
PVT1-218ENST00000523328 ATP11BQ9Y2G3 1177 aa27.57■■■□□ 2
PVT1-218ENST00000523328 SMCHD1A6NHR9 2005 aa27.57■■■□□ 2
PVT1-218ENST00000523328 SEPT4O43236 478 aa27.56■■■□□ 2
PVT1-218ENST00000523328 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.56■■■□□ 2
PVT1-218ENST00000523328 FAM161BQ96MY7 647 aa27.56■■■□□ 2
PVT1-218ENST00000523328 COL25A1Q9BXS0 654 aaPredicted RBP27.56■■■□□ 2
PVT1-218ENST00000523328 DCP1AQ9NPI6 582 aaPredicted RBP27.56■■■□□ 2
PVT1-218ENST00000523328 SNX17Q15036 470 aa27.55■■■□□ 2
PVT1-218ENST00000523328 TMEM179Q6ZVK1 233 aa27.55■■■□□ 2
PVT1-218ENST00000523328 MB21D1Q8N884 522 aa27.55■■■□□ 2
PVT1-218ENST00000523328 SLC44A5Q8NCS7 719 aa27.55■■■□□ 2
PVT1-218ENST00000523328 SDR42E1Q8WUS8 393 aa27.55■■■□□ 2
PVT1-218ENST00000523328 IL1RAPL2Q9NP60 686 aa27.55■■■□□ 2
PVT1-218ENST00000523328 EYSQ5T1H1 3165 aa27.54■■■□□ 2
PVT1-218ENST00000523328 TCRBV5S4A2TA0A5A2 114 aa27.54■■■□□ 2
PVT1-218ENST00000523328 KBTBD13C9JR72 458 aa27.54■■■□□ 2
PVT1-218ENST00000523328 CYP2D6P10635 497 aa27.54■■■□□ 2
PVT1-218ENST00000523328 COL11A1P12107 1806 aaPredicted RBP27.54■■■□□ 2
PVT1-218ENST00000523328 DSG3P32926 999 aa27.54■■■□□ 2
PVT1-218ENST00000523328 SHHQ15465 462 aa27.54■■■□□ 2
PVT1-218ENST00000523328 SIAH1Q8IUQ4 282 aa27.54■■■□□ 2
PVT1-218ENST00000523328 ZNF532Q9HCE3 1301 aa27.54■■■□□ 2
PVT1-218ENST00000523328 BAZ2AQ9UIF9 1905 aaKnown RBP27.54■■■□□ 2
PVT1-218ENST00000523328 ZNF697Q5TEC3 545 aa27.53■■■□□ 2
PVT1-218ENST00000523328 ABRAQ8N0Z2 381 aa27.53■■■□□ 2
PVT1-218ENST00000523328 LCORLQ8N3X6 602 aa27.53■■■□□ 2
PVT1-218ENST00000523328 MROH8Q9H579 483 aa27.53■■■□□ 2
PVT1-218ENST00000523328 TRIM60Q495X7 471 aa27.52■■■□□ 2
PVT1-218ENST00000523328 PRAMEF19Q5SWL8 479 aa27.52■■■□□ 2
PVT1-218ENST00000523328 C9orf50Q5SZB4 431 aa27.52■■■□□ 2
PVT1-218ENST00000523328 CLEC10AQ8IUN9 316 aa27.52■■■□□ 2
PVT1-218ENST00000523328 RHPN1Q8TCX5 695 aa27.52■■■□□ 2
PVT1-218ENST00000523328 ATG4CQ96DT6 458 aa27.52■■■□□ 2
PVT1-218ENST00000523328 SLC5A4Q9NY91 659 aa27.52■■■□□ 2
PVT1-218ENST00000523328 SWAP70Q9UH65 585 aa27.52■■■□□ 2
PVT1-218ENST00000523328 PLS1Q14651 629 aa27.51■■□□□ 1.99
PVT1-218ENST00000523328 LRRC41Q15345 812 aa27.51■■□□□ 1.99
PVT1-218ENST00000523328 NCAPG2Q86XI2 1143 aa27.51■■□□□ 1.99
PVT1-218ENST00000523328 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.51■■□□□ 1.99
PVT1-218ENST00000523328 DYNLL2Q96FJ2 89 aa27.51■■□□□ 1.99
PVT1-218ENST00000523328 MAML3Q96JK9 1138 aa27.51■■□□□ 1.99
PVT1-218ENST00000523328 PRDM5Q9NQX1 630 aaPredicted RBP27.51■■□□□ 1.99
PVT1-218ENST00000523328 PDLIM7Q9NR12 457 aa27.51■■□□□ 1.99
PVT1-218ENST00000523328 TMX2Q9Y320 296 aa27.51■■□□□ 1.99
PVT1-218ENST00000523328 FLOT1O75955 427 aa27.5■■□□□ 1.99
PVT1-218ENST00000523328 ADCYAP1R1P41586 468 aa27.5■■□□□ 1.99
PVT1-218ENST00000523328 FAM47AQ5JRC9 791 aa27.5■■□□□ 1.99
PVT1-218ENST00000523328 C1orf53Q5VUE5 145 aa27.5■■□□□ 1.99
PVT1-218ENST00000523328 SPICE1Q8N0Z3 855 aa27.5■■□□□ 1.99
PVT1-218ENST00000523328 BADQ92934 168 aa27.5■■□□□ 1.99
PVT1-218ENST00000523328 PLXNA1Q9UIW2 1896 aa27.5■■□□□ 1.99
PVT1-218ENST00000523328 VCANP13611 3396 aa27.49■■□□□ 1.99
PVT1-218ENST00000523328 GOLIM4O00461 696 aa27.49■■□□□ 1.99
PVT1-218ENST00000523328 AKR1B1P15121 316 aa27.49■■□□□ 1.99
PVT1-218ENST00000523328 HSP90AB4PQ58FF6 505 aa27.49■■□□□ 1.99
PVT1-218ENST00000523328 SH3RF1Q7Z6J0 888 aa27.49■■□□□ 1.99
PVT1-218ENST00000523328 DNAJC2Q99543 621 aaKnown RBP27.49■■□□□ 1.99
PVT1-218ENST00000523328 VCPKMTQ9H867 229 aa27.49■■□□□ 1.99
PVT1-218ENST00000523328 CDH23Q9H251 3354 aa27.49■■□□□ 1.99
PVT1-218ENST00000523328 TRIM43BA6NCK2 446 aa27.48■■□□□ 1.99
PVT1-218ENST00000523328 MYCNP04198 464 aaPredicted RBP27.48■■□□□ 1.99
PVT1-218ENST00000523328 ICA1Q05084 483 aa27.48■■□□□ 1.99
PVT1-218ENST00000523328 FERMT2Q96AC1 680 aa27.48■■□□□ 1.99
PVT1-218ENST00000523328 TRIM43Q96BQ3 446 aaPredicted RBP27.48■■□□□ 1.99
PVT1-218ENST00000523328 CDX2Q99626 313 aaPredicted RBP27.48■■□□□ 1.99
PVT1-218ENST00000523328 ARMT1Q9H993 441 aa27.48■■□□□ 1.99
PVT1-218ENST00000523328 ARHGEF10LQ9HCE6 1279 aa27.48■■□□□ 1.99
PVT1-218ENST00000523328 SMIM22K7EJ46 135 aa27.47■■□□□ 1.99
PVT1-218ENST00000523328 FCER1AP12319 257 aa27.47■■□□□ 1.99
PVT1-218ENST00000523328 TMEM132BQ14DG7 1078 aa27.47■■□□□ 1.99
PVT1-218ENST00000523328 SEMA6BQ9H3T3 888 aa27.47■■□□□ 1.99
PVT1-218ENST00000523328 ADAMTS5Q9UNA0 930 aa27.47■■□□□ 1.99
PVT1-218ENST00000523328 WDR46O15213 610 aaKnown RBP27.46■■□□□ 1.99
PVT1-218ENST00000523328 PRKAB2O43741 272 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms