RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 TOP1P11387 765 aaKnown RBP17.51■□□□□ 0.39
CSGALNACT1-211ENST00000522854 NOVP48745 357 aa17.51■□□□□ 0.39
CSGALNACT1-211ENST00000522854 RCAN1P53805 252 aa17.51■□□□□ 0.39
CSGALNACT1-211ENST00000522854 DNM1Q05193 864 aaKnown RBP17.51■□□□□ 0.39
CSGALNACT1-211ENST00000522854 ABCB5Q2M3G0 1257 aa17.51■□□□□ 0.39
CSGALNACT1-211ENST00000522854 CCDC84Q86UT8 332 aaPredicted RBP17.51■□□□□ 0.39
CSGALNACT1-211ENST00000522854 SIAH1Q8IUQ4 282 aa17.51■□□□□ 0.39
CSGALNACT1-211ENST00000522854 SHISA4Q96DD7 197 aa17.51■□□□□ 0.39
CSGALNACT1-211ENST00000522854 GGA3Q9NZ52 723 aa17.51■□□□□ 0.39
CSGALNACT1-211ENST00000522854 CNPY2Q9Y2B0 182 aa17.51■□□□□ 0.39
CSGALNACT1-211ENST00000522854 V9GY48 417 aaPredicted RBP17.51■□□□□ 0.39
CSGALNACT1-211ENST00000522854 FRMPD2Q68DX3 1309 aaPredicted RBP17.51■□□□□ 0.39
CSGALNACT1-211ENST00000522854 TTLL1O95922 423 aa17.5■□□□□ 0.39
CSGALNACT1-211ENST00000522854 EEF2P13639 858 aaKnown RBP17.5■□□□□ 0.39
CSGALNACT1-211ENST00000522854 TPRNQ4KMQ1 711 aa17.5■□□□□ 0.39
CSGALNACT1-211ENST00000522854 CNTNAP5Q8WYK1 1306 aa17.5■□□□□ 0.39
CSGALNACT1-211ENST00000522854 GRM4Q14833 912 aa17.49■□□□□ 0.39
CSGALNACT1-211ENST00000522854 CCDC178Q5BJE1 867 aa17.49■□□□□ 0.39
CSGALNACT1-211ENST00000522854 NBPF12Q5TAG4 269 aaPredicted RBP17.49■□□□□ 0.39
CSGALNACT1-211ENST00000522854 CLEC17AQ6ZS10 378 aa17.49■□□□□ 0.39
CSGALNACT1-211ENST00000522854 RBM28Q9NW13 759 aaKnown RBP17.49■□□□□ 0.39
CSGALNACT1-211ENST00000522854 HERC5Q9UII4 1024 aaKnown RBP17.49■□□□□ 0.39
CSGALNACT1-211ENST00000522854 KCNJ14Q9UNX9 436 aa17.49■□□□□ 0.39
CSGALNACT1-211ENST00000522854 CYTH3O43739 400 aa17.49■□□□□ 0.39
CSGALNACT1-211ENST00000522854 NCLP19338 710 aaKnown RBP17.49■□□□□ 0.39
CSGALNACT1-211ENST00000522854 TNNI2P48788 182 aa17.49■□□□□ 0.39
CSGALNACT1-211ENST00000522854 NT5C2P49902 561 aa17.49■□□□□ 0.39
CSGALNACT1-211ENST00000522854 RESTQ13127 1097 aa17.49■□□□□ 0.39
CSGALNACT1-211ENST00000522854 PKN1Q16512 942 aa17.49■□□□□ 0.39
CSGALNACT1-211ENST00000522854 FBXO18Q8NFZ0 1043 aa17.49■□□□□ 0.39
CSGALNACT1-211ENST00000522854 CCDC17Q96LX7 622 aa17.49■□□□□ 0.39
CSGALNACT1-211ENST00000522854 KIF28PB7ZC32 967 aa17.48■□□□□ 0.39
CSGALNACT1-211ENST00000522854 PDHBP11177 359 aa17.48■□□□□ 0.39
CSGALNACT1-211ENST00000522854 ICA1Q05084 483 aa17.48■□□□□ 0.39
CSGALNACT1-211ENST00000522854 TRIM22Q8IYM9 498 aa17.48■□□□□ 0.39
CSGALNACT1-211ENST00000522854 UBA5Q9GZZ9 404 aa17.48■□□□□ 0.39
CSGALNACT1-211ENST00000522854 KIF3AQ9Y496 699 aa17.48■□□□□ 0.39
CSGALNACT1-211ENST00000522854 PRPF40AO75400 957 aaKnown RBP17.48■□□□□ 0.39
CSGALNACT1-211ENST00000522854 TNFAIP1Q13829 316 aa17.48■□□□□ 0.39
CSGALNACT1-211ENST00000522854 KRT40Q6A162 431 aa17.48■□□□□ 0.39
CSGALNACT1-211ENST00000522854 TMEM179Q6ZVK1 233 aa17.48■□□□□ 0.39
CSGALNACT1-211ENST00000522854 FTOQ9C0B1 505 aaKnown RBP eCLIP17.48■□□□□ 0.39
CSGALNACT1-211ENST00000522854 VPS54Q9P1Q0 977 aa17.48■□□□□ 0.39
CSGALNACT1-211ENST00000522854 STK36Q9NRP7 1315 aa17.47■□□□□ 0.39
CSGALNACT1-211ENST00000522854 A0A1W2PRG0 241 aa17.47■□□□□ 0.39
CSGALNACT1-211ENST00000522854 PALM3A6NDB9 673 aaPredicted RBP17.47■□□□□ 0.39
CSGALNACT1-211ENST00000522854 FIBPO43427 364 aa17.47■□□□□ 0.39
CSGALNACT1-211ENST00000522854 ECE1P42892 770 aa17.47■□□□□ 0.39
CSGALNACT1-211ENST00000522854 RNF26Q9BY78 433 aaPredicted RBP17.47■□□□□ 0.39
CSGALNACT1-211ENST00000522854 GPCPD1Q9NPB8 672 aa17.47■□□□□ 0.39
CSGALNACT1-211ENST00000522854 TFIP11Q9UBB9 837 aaKnown RBP17.47■□□□□ 0.39
CSGALNACT1-211ENST00000522854 KLRF2D3W0D1 207 aa17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 SOCS7O14512 581 aa17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 DEXIO95424 95 aa17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 PARP1P09874 1014 aaKnown RBP17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 LMOD1P29536 600 aaPredicted RBP17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 KIF5BP33176 963 aa17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 MMP14P50281 582 aa17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 PPP2R5BQ15173 497 aa17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 KANSL2Q9H9L4 492 aa17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 VAT1LQ9HCJ6 419 aa17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 MYH15Q9Y2K3 1946 aa17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 ATAD5Q96QE3 1844 aa17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 CEBPZQ03701 1054 aaKnown RBP17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 TTBK2Q6IQ55 1244 aa17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 KCTD1Q719H9 257 aa17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 ACER1Q8TDN7 264 aa17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 GPKOWQ92917 476 aaPredicted RBP eCLIP17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 NUP88Q99567 741 aaPredicted RBP17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 GLIS2Q9BZE0 524 aaPredicted RBP17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 ZBTB21Q9ULJ3 1066 aa17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 ISY1Q9ULR0 285 aaKnown RBP17.46■□□□□ 0.39
CSGALNACT1-211ENST00000522854 PHF20L1A8MW92 1017 aa17.45■□□□□ 0.38
CSGALNACT1-211ENST00000522854 ADAMTS3O15072 1205 aa17.45■□□□□ 0.38
CSGALNACT1-211ENST00000522854 PRPF3O43395 683 aaKnown RBP17.45■□□□□ 0.38
CSGALNACT1-211ENST00000522854 AKAP17AQ02040 695 aaKnown RBP17.45■□□□□ 0.38
CSGALNACT1-211ENST00000522854 CABP5Q9NP86 173 aa17.45■□□□□ 0.38
CSGALNACT1-211ENST00000522854 LMBRD1Q9NUN5 540 aa17.45■□□□□ 0.38
CSGALNACT1-211ENST00000522854 TBC1D12O60347 775 aa17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 SLC16A2P36021 539 aa17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 PRKG1Q13976 671 aa17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 HOMER1Q86YM7 354 aa17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 SPICE1Q8N0Z3 855 aa17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 ADARB2Q9NS39 739 aaKnown RBP17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 DDX11L8A8MPP1 907 aa17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 ADM5C9JUS6 153 aa17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 GADD45BO75293 160 aaPredicted RBP17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 CAP2P40123 477 aa17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 KIF23Q02241 960 aaPredicted RBP17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 ZYXQ15942 572 aaKnown RBP17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 KIAA1755Q5JYT7 1200 aa17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 DPY19L2Q6NUT2 758 aa17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 USP48Q86UV5 1035 aa17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 OXER1Q8TDS5 423 aa17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 MAP3K14Q99558 947 aa17.44■□□□□ 0.38
CSGALNACT1-211ENST00000522854 GRIN3BO60391 1043 aa17.43■□□□□ 0.38
CSGALNACT1-211ENST00000522854 SNHG28P0DPA3 235 aa17.43■□□□□ 0.38
CSGALNACT1-211ENST00000522854 INPP5BP32019 993 aa17.43■□□□□ 0.38
CSGALNACT1-211ENST00000522854 MAP3K10Q02779 954 aa17.43■□□□□ 0.38
CSGALNACT1-211ENST00000522854 CCDC96Q2M329 555 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms