RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 CLIP2Q9UDT6 1046 aa17.91■□□□□ 0.46
CTNNA1-236ENST00000522792 MAD2L2Q9UI95 211 aa17.91■□□□□ 0.46
CTNNA1-236ENST00000522792 ASTN2O75129 1339 aaPredicted RBP17.91■□□□□ 0.46
CTNNA1-236ENST00000522792 GOLGA8HP0CJ92 632 aa17.91■□□□□ 0.46
CTNNA1-236ENST00000522792 TPRNQ4KMQ1 711 aa17.91■□□□□ 0.46
CTNNA1-236ENST00000522792 FKBP1CQ5VVH2 108 aa17.91■□□□□ 0.46
CTNNA1-236ENST00000522792 METTL16Q86W50 562 aaKnown RBP17.91■□□□□ 0.46
CTNNA1-236ENST00000522792 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.91■□□□□ 0.46
CTNNA1-236ENST00000522792 GREB1LQ9C091 1923 aaPredicted RBP17.9■□□□□ 0.46
CTNNA1-236ENST00000522792 DICER1Q9UPY3 1922 aaKnown RBP17.9■□□□□ 0.46
CTNNA1-236ENST00000522792 SBF1O95248 1867 aa17.9■□□□□ 0.46
CTNNA1-236ENST00000522792 PRPF3O43395 683 aaKnown RBP17.9■□□□□ 0.46
CTNNA1-236ENST00000522792 TTLL1O95922 423 aa17.9■□□□□ 0.46
CTNNA1-236ENST00000522792 KRT85P78386 507 aa17.9■□□□□ 0.46
CTNNA1-236ENST00000522792 KIF4BQ2VIQ3 1234 aa17.9■□□□□ 0.46
CTNNA1-236ENST00000522792 MAP3K14Q99558 947 aa17.9■□□□□ 0.46
CTNNA1-236ENST00000522792 RNF181Q9P0P0 153 aa17.9■□□□□ 0.46
CTNNA1-236ENST00000522792 DDX49Q9Y6V7 483 aaKnown RBP17.9■□□□□ 0.46
CTNNA1-236ENST00000522792 KIF28PB7ZC32 967 aa17.89■□□□□ 0.46
CTNNA1-236ENST00000522792 MMP14P50281 582 aa17.89■□□□□ 0.46
CTNNA1-236ENST00000522792 RRP1BQ14684 758 aaKnown RBP17.89■□□□□ 0.46
CTNNA1-236ENST00000522792 PKN1Q16512 942 aa17.89■□□□□ 0.46
CTNNA1-236ENST00000522792 USP17L2Q6R6M4 530 aa17.89■□□□□ 0.46
CTNNA1-236ENST00000522792 FAM83AQ86UY5 434 aa17.89■□□□□ 0.46
CTNNA1-236ENST00000522792 KCNJ14Q9UNX9 436 aa17.89■□□□□ 0.46
CTNNA1-236ENST00000522792 GADD45BO75293 160 aaPredicted RBP17.89■□□□□ 0.45
CTNNA1-236ENST00000522792 KIF23Q02241 960 aaPredicted RBP17.89■□□□□ 0.45
CTNNA1-236ENST00000522792 ABCB5Q2M3G0 1257 aa17.89■□□□□ 0.45
CTNNA1-236ENST00000522792 GZF1Q9H116 711 aaPredicted RBP17.89■□□□□ 0.45
CTNNA1-236ENST00000522792 MYH6P13533 1939 aa17.89■□□□□ 0.45
CTNNA1-236ENST00000522792 USP17L5A8MUK1 530 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 PARP1P09874 1014 aaKnown RBP17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 JAG1P78504 1218 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 RASA3Q14644 834 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 SEPT2Q15019 361 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 SKOR2Q2VWA4 1001 aaPredicted RBP17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 GPC2Q8N158 579 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 TMEM87AQ8NBN3 555 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 CPVLQ9H3G5 476 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 HERC5Q9UII4 1024 aaKnown RBP17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 SRCAPQ6ZRS2 3230 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 MYH15Q9Y2K3 1946 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 PALM3A6NDB9 673 aaPredicted RBP17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 H7C1D1 291 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 TNNI2P48788 182 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 GNAQP50148 359 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 CEBPZQ03701 1054 aaKnown RBP17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 SLC35G1Q2M3R5 365 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 MIGA2Q7L4E1 593 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 GPT2Q8TD30 523 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 FTOQ9C0B1 505 aaKnown RBP eCLIP17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 VPS54Q9P1Q0 977 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 HACL1Q9UJ83 578 aa17.88■□□□□ 0.45
CTNNA1-236ENST00000522792 FRMPD2Q68DX3 1309 aaPredicted RBP17.87■□□□□ 0.45
CTNNA1-236ENST00000522792 KLRF2D3W0D1 207 aa17.87■□□□□ 0.45
CTNNA1-236ENST00000522792 GH2P01242 217 aa17.87■□□□□ 0.45
CTNNA1-236ENST00000522792 GNL2Q13823 731 aaKnown RBP17.87■□□□□ 0.45
CTNNA1-236ENST00000522792 TMEM179Q6ZVK1 233 aa17.87■□□□□ 0.45
CTNNA1-236ENST00000522792 SHISA4Q96DD7 197 aa17.87■□□□□ 0.45
CTNNA1-236ENST00000522792 GPRC5DQ9NZD1 345 aa17.87■□□□□ 0.45
CTNNA1-236ENST00000522792 PDHBP11177 359 aa17.86■□□□□ 0.45
CTNNA1-236ENST00000522792 EEF2P13639 858 aaKnown RBP17.86■□□□□ 0.45
CTNNA1-236ENST00000522792 TRPM4Q8TD43 1214 aa17.86■□□□□ 0.45
CTNNA1-236ENST00000522792 KANSL2Q9H9L4 492 aa17.86■□□□□ 0.45
CTNNA1-236ENST00000522792 PGAP2Q9UHJ9 254 aa17.86■□□□□ 0.45
CTNNA1-236ENST00000522792 MYH4Q9Y623 1939 aa17.86■□□□□ 0.45
CTNNA1-236ENST00000522792 CYTH3O43739 400 aa17.86■□□□□ 0.45
CTNNA1-236ENST00000522792 DDNO94850 711 aaPredicted RBP17.86■□□□□ 0.45
CTNNA1-236ENST00000522792 MMP1P03956 469 aa17.86■□□□□ 0.45
CTNNA1-236ENST00000522792 ICA1Q05084 483 aa17.86■□□□□ 0.45
CTNNA1-236ENST00000522792 CSPP1Q1MSJ5 1256 aa17.86■□□□□ 0.45
CTNNA1-236ENST00000522792 KLHL40Q2TBA0 621 aa17.86■□□□□ 0.45
CTNNA1-236ENST00000522792 RGS22Q8NE09 1264 aa17.86■□□□□ 0.45
CTNNA1-236ENST00000522792 SPATA32Q96LK8 384 aa17.86■□□□□ 0.45
CTNNA1-236ENST00000522792 RAD21O60216 631 aa17.85■□□□□ 0.45
CTNNA1-236ENST00000522792 VEGFAP15692 232 aaPredicted RBP17.85■□□□□ 0.45
CTNNA1-236ENST00000522792 EPS15P42566 896 aa17.85■□□□□ 0.45
CTNNA1-236ENST00000522792 TNFAIP1Q13829 316 aa17.85■□□□□ 0.45
CTNNA1-236ENST00000522792 C9orf131Q5VYM1 1079 aa17.85■□□□□ 0.45
CTNNA1-236ENST00000522792 USP28Q96RU2 1077 aa17.85■□□□□ 0.45
CTNNA1-236ENST00000522792 CABP5Q9NP86 173 aa17.85■□□□□ 0.45
CTNNA1-236ENST00000522792 SCG2P13521 617 aa17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 SAFBQ15424 915 aaKnown RBP eCLIP17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 BRAPQ7Z569 592 aa17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 SIAH1Q8IUQ4 282 aa17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 DIS3L2Q8IYB7 885 aaKnown RBP17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 LEO1Q8WVC0 666 aaPredicted RBP17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 ZNF396Q96N95 335 aaPredicted RBP17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 SCAND2PQ9GZW5 306 aaPredicted RBP17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 GPCPD1Q9NPB8 672 aa17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 BTBD18B2RXH4 712 aa17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 XBP1P17861 261 aa17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 PFKFB3Q16875 520 aaPredicted RBP17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 PPP4R3BQ5MIZ7 849 aa17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 ANGEL2Q5VTE6 544 aaKnown RBP17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 MYSM1Q5VVJ2 828 aa17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 LZTS2Q9BRK4 669 aa17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 UBA5Q9GZZ9 404 aa17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 NYAP2Q9P242 653 aa17.84■□□□□ 0.45
CTNNA1-236ENST00000522792 CFAP45Q9UL16 551 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms