RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 ECE1P42892 770 aa17.55■□□□□ 0.4
SREK1-209ENST00000520953 NT5C2P49902 561 aa17.55■□□□□ 0.4
SREK1-209ENST00000520953 SLC35G1Q2M3R5 365 aa17.55■□□□□ 0.4
SREK1-209ENST00000520953 FOXD4L5Q5VV16 416 aaPredicted RBP17.55■□□□□ 0.4
SREK1-209ENST00000520953 FOXD4L4Q8WXT5 416 aaPredicted RBP17.55■□□□□ 0.4
SREK1-209ENST00000520953 TRAF5O00463 557 aa17.55■□□□□ 0.4
SREK1-209ENST00000520953 DDAH1O94760 285 aa17.55■□□□□ 0.4
SREK1-209ENST00000520953 USP17L2Q6R6M4 530 aa17.55■□□□□ 0.4
SREK1-209ENST00000520953 MOB2Q70IA6 237 aa17.55■□□□□ 0.4
SREK1-209ENST00000520953 AIFM3Q96NN9 605 aa17.55■□□□□ 0.4
SREK1-209ENST00000520953 GJB4Q9NTQ9 266 aa17.55■□□□□ 0.4
SREK1-209ENST00000520953 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.55■□□□□ 0.4
SREK1-209ENST00000520953 CPLX1O14810 134 aa17.54■□□□□ 0.4
SREK1-209ENST00000520953 CCDC178Q5BJE1 867 aa17.54■□□□□ 0.4
SREK1-209ENST00000520953 ZC3H15Q8WU90 426 aaKnown RBP17.54■□□□□ 0.4
SREK1-209ENST00000520953 CDCA5Q96FF9 252 aa17.54■□□□□ 0.4
SREK1-209ENST00000520953 WRNIP1Q96S55 665 aa17.54■□□□□ 0.4
SREK1-209ENST00000520953 KANSL2Q9H9L4 492 aa17.54■□□□□ 0.4
SREK1-209ENST00000520953 CABP5Q9NP86 173 aa17.54■□□□□ 0.4
SREK1-209ENST00000520953 MAD2L2Q9UI95 211 aa17.54■□□□□ 0.4
SREK1-209ENST00000520953 ZDHHC9Q9Y397 364 aa17.54■□□□□ 0.4
SREK1-209ENST00000520953 PPP2R3BQ9Y5P8 575 aa17.54■□□□□ 0.4
SREK1-209ENST00000520953 RAD21O60216 631 aa17.53■□□□□ 0.4
SREK1-209ENST00000520953 KIAA1755Q5JYT7 1200 aa17.53■□□□□ 0.4
SREK1-209ENST00000520953 SRBD1Q8N5C6 995 aaKnown RBP17.53■□□□□ 0.4
SREK1-209ENST00000520953 FRMPD2Q68DX3 1309 aaPredicted RBP17.53■□□□□ 0.4
SREK1-209ENST00000520953 VEGFAP15692 232 aaPredicted RBP17.53■□□□□ 0.4
SREK1-209ENST00000520953 FUT2Q10981 343 aa17.53■□□□□ 0.4
SREK1-209ENST00000520953 DGKZQ13574 1117 aa17.53■□□□□ 0.4
SREK1-209ENST00000520953 PNMA8AQ86V59 439 aaPredicted RBP17.53■□□□□ 0.4
SREK1-209ENST00000520953 PIBF1Q8WXW3 757 aa17.53■□□□□ 0.4
SREK1-209ENST00000520953 ZNF341Q9BYN7 854 aa17.53■□□□□ 0.4
SREK1-209ENST00000520953 USP2O75604 605 aaPredicted RBP17.52■□□□□ 0.4
SREK1-209ENST00000520953 PDHBP11177 359 aa17.52■□□□□ 0.4
SREK1-209ENST00000520953 SYT1P21579 422 aa17.52■□□□□ 0.4
SREK1-209ENST00000520953 GRM4Q14833 912 aa17.52■□□□□ 0.4
SREK1-209ENST00000520953 KLRG1Q96E93 195 aa17.52■□□□□ 0.4
SREK1-209ENST00000520953 CHAMP1Q96JM3 812 aa17.52■□□□□ 0.4
SREK1-209ENST00000520953 LLPHQ9BRT6 129 aaKnown RBP17.52■□□□□ 0.4
SREK1-209ENST00000520953 CWC22Q9HCG8 908 aaKnown RBP17.52■□□□□ 0.4
SREK1-209ENST00000520953 NYAP2Q9P242 653 aa17.52■□□□□ 0.4
SREK1-209ENST00000520953 DCAF15Q66K64 600 aa17.52■□□□□ 0.39
SREK1-209ENST00000520953 TMTC3Q6ZXV5 915 aa17.52■□□□□ 0.39
SREK1-209ENST00000520953 TNPO1Q92973 898 aaKnown RBP17.52■□□□□ 0.39
SREK1-209ENST00000520953 NUP88Q99567 741 aaPredicted RBP17.52■□□□□ 0.39
SREK1-209ENST00000520953 SLC26A6Q9BXS9 759 aa17.52■□□□□ 0.39
SREK1-209ENST00000520953 ZNF112Q9UJU3 913 aa17.52■□□□□ 0.39
SREK1-209ENST00000520953 RCAN1P53805 252 aa17.51■□□□□ 0.39
SREK1-209ENST00000520953 ZYXQ15942 572 aaKnown RBP17.51■□□□□ 0.39
SREK1-209ENST00000520953 SUPT20HL1Q3ZLR7 823 aa17.51■□□□□ 0.39
SREK1-209ENST00000520953 OTUD7BQ6GQQ9 843 aa17.51■□□□□ 0.39
SREK1-209ENST00000520953 SPICE1Q8N0Z3 855 aa17.51■□□□□ 0.39
SREK1-209ENST00000520953 CTCFLQ8NI51 663 aaPredicted RBP17.51■□□□□ 0.39
SREK1-209ENST00000520953 MKL1Q969V6 931 aa17.51■□□□□ 0.39
SREK1-209ENST00000520953 ORC3Q9UBD5 711 aaPredicted RBP17.51■□□□□ 0.39
SREK1-209ENST00000520953 TTBK2Q6IQ55 1244 aa17.5■□□□□ 0.39
SREK1-209ENST00000520953 KCTD1Q719H9 257 aa17.5■□□□□ 0.39
SREK1-209ENST00000520953 DOCK1Q14185 1865 aa17.5■□□□□ 0.39
SREK1-209ENST00000520953 OTOFQ9HC10 1997 aa17.5■□□□□ 0.39
SREK1-209ENST00000520953 PALM3A6NDB9 673 aaPredicted RBP17.5■□□□□ 0.39
SREK1-209ENST00000520953 CYTH3O43739 400 aa17.5■□□□□ 0.39
SREK1-209ENST00000520953 DHX16O60231 1041 aaKnown RBP17.5■□□□□ 0.39
SREK1-209ENST00000520953 CTNND1O60716 968 aaKnown RBP17.5■□□□□ 0.39
SREK1-209ENST00000520953 ASNSP08243 561 aa17.5■□□□□ 0.39
SREK1-209ENST00000520953 CALM1P0DP23 149 aa17.5■□□□□ 0.39
SREK1-209ENST00000520953 CALM2P0DP24 149 aa17.5■□□□□ 0.39
SREK1-209ENST00000520953 CALM3P0DP25 149 aa17.5■□□□□ 0.39
SREK1-209ENST00000520953 IFNAR1P17181 557 aa17.5■□□□□ 0.39
SREK1-209ENST00000520953 GUCY1B3Q02153 619 aa17.5■□□□□ 0.39
SREK1-209ENST00000520953 UBA5Q9GZZ9 404 aa17.5■□□□□ 0.39
SREK1-209ENST00000520953 GPCPD1Q9NPB8 672 aa17.5■□□□□ 0.39
SREK1-209ENST00000520953 CNTNAP5Q8WYK1 1306 aa17.5■□□□□ 0.39
SREK1-209ENST00000520953 SNHG28P0DPA3 235 aa17.49■□□□□ 0.39
SREK1-209ENST00000520953 LARP1BQ659C4 914 aaKnown RBP17.49■□□□□ 0.39
SREK1-209ENST00000520953 CDC37L1Q7L3B6 337 aa17.49■□□□□ 0.39
SREK1-209ENST00000520953 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.49■□□□□ 0.39
SREK1-209ENST00000520953 PAPPA2Q9BXP8 1791 aa17.49■□□□□ 0.39
SREK1-209ENST00000520953 F5H6K3 240 aa17.49■□□□□ 0.39
SREK1-209ENST00000520953 FMNL1O95466 1100 aaPredicted RBP17.49■□□□□ 0.39
SREK1-209ENST00000520953 NDUFB10O96000 172 aa17.49■□□□□ 0.39
SREK1-209ENST00000520953 PARP1P09874 1014 aaKnown RBP17.49■□□□□ 0.39
SREK1-209ENST00000520953 KLRC3Q07444 240 aa17.49■□□□□ 0.39
SREK1-209ENST00000520953 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.49■□□□□ 0.39
SREK1-209ENST00000520953 FAM184AQ8NB25 1140 aa17.49■□□□□ 0.39
SREK1-209ENST00000520953 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
SREK1-209ENST00000520953 SHISA4Q96DD7 197 aa17.49■□□□□ 0.39
SREK1-209ENST00000520953 SLFN13Q68D06 897 aa17.48■□□□□ 0.39
SREK1-209ENST00000520953 SCYL3Q8IZE3 742 aa17.48■□□□□ 0.39
SREK1-209ENST00000520953 CLMNQ96JQ2 1002 aa17.48■□□□□ 0.39
SREK1-209ENST00000520953 ZNF408Q9H9D4 720 aa17.48■□□□□ 0.39
SREK1-209ENST00000520953 RBM28Q9NW13 759 aaKnown RBP17.48■□□□□ 0.39
SREK1-209ENST00000520953 MTMR6Q9Y217 621 aa17.48■□□□□ 0.39
SREK1-209ENST00000520953 V9GY48 417 aaPredicted RBP17.48■□□□□ 0.39
SREK1-209ENST00000520953 CCDC196A0A1B0GTZ2 297 aa17.47■□□□□ 0.39
SREK1-209ENST00000520953 VPS37CA5D8V6 355 aaPredicted RBP17.47■□□□□ 0.39
SREK1-209ENST00000520953 KLRF2D3W0D1 207 aa17.47■□□□□ 0.39
SREK1-209ENST00000520953 STX6O43752 255 aa17.47■□□□□ 0.39
SREK1-209ENST00000520953 SLC16A2P36021 539 aa17.47■□□□□ 0.39
SREK1-209ENST00000520953 SSRP1Q08945 709 aaKnown RBP17.47■□□□□ 0.39
SREK1-209ENST00000520953 ZNF543Q08ER8 600 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms