RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 MMP1P03956 469 aa18.58■□□□□ 0.56
SNHG6-201ENST00000520348 SLURP2P0DP57 97 aa18.58■□□□□ 0.56
SNHG6-201ENST00000520348 FOSBP53539 338 aa18.58■□□□□ 0.56
SNHG6-201ENST00000520348 ARHGAP27Q6ZUM4 889 aa18.58■□□□□ 0.56
SNHG6-201ENST00000520348 GPC2Q8N158 579 aa18.58■□□□□ 0.56
SNHG6-201ENST00000520348 STAG2Q8N3U4 1231 aa18.58■□□□□ 0.56
SNHG6-201ENST00000520348 GPT2Q8TD30 523 aa18.58■□□□□ 0.56
SNHG6-201ENST00000520348 KANSL2Q9H9L4 492 aa18.58■□□□□ 0.56
SNHG6-201ENST00000520348 GDPD2Q9HCC8 539 aa18.58■□□□□ 0.56
SNHG6-201ENST00000520348 FAM196BA6NMK8 535 aa18.57■□□□□ 0.56
SNHG6-201ENST00000520348 FIBPO43427 364 aa18.57■□□□□ 0.56
SNHG6-201ENST00000520348 EGFRP00533 1210 aa18.57■□□□□ 0.56
SNHG6-201ENST00000520348 PDHBP11177 359 aa18.57■□□□□ 0.56
SNHG6-201ENST00000520348 UBE2HP62256 183 aa18.57■□□□□ 0.56
SNHG6-201ENST00000520348 TRIM29Q14134 588 aa18.57■□□□□ 0.56
SNHG6-201ENST00000520348 PFKFB3Q16875 520 aaPredicted RBP18.57■□□□□ 0.56
SNHG6-201ENST00000520348 FOXD4L6Q3SYB3 417 aaPredicted RBP18.57■□□□□ 0.56
SNHG6-201ENST00000520348 ASPRV1Q53RT3 343 aa18.57■□□□□ 0.56
SNHG6-201ENST00000520348 MYSM1Q5VVJ2 828 aa18.57■□□□□ 0.56
SNHG6-201ENST00000520348 FOXD4L3Q6VB84 417 aaPredicted RBP18.57■□□□□ 0.56
SNHG6-201ENST00000520348 LEO1Q8WVC0 666 aaPredicted RBP18.57■□□□□ 0.56
SNHG6-201ENST00000520348 ZNF396Q96N95 335 aaPredicted RBP18.57■□□□□ 0.56
SNHG6-201ENST00000520348 TRIM34Q9BYJ4 488 aa18.57■□□□□ 0.56
SNHG6-201ENST00000520348 CNOT7Q9UIV1 285 aaKnown RBP18.57■□□□□ 0.56
SNHG6-201ENST00000520348 CFAP45Q9UL16 551 aa18.57■□□□□ 0.56
SNHG6-201ENST00000520348 MYH4Q9Y623 1939 aa18.57■□□□□ 0.56
SNHG6-201ENST00000520348 CYTH3O43739 400 aa18.56■□□□□ 0.56
SNHG6-201ENST00000520348 PARP1P09874 1014 aaKnown RBP18.56■□□□□ 0.56
SNHG6-201ENST00000520348 YBX3P16989 372 aaKnown RBP eCLIP18.56■□□□□ 0.56
SNHG6-201ENST00000520348 TNNI2P48788 182 aa18.56■□□□□ 0.56
SNHG6-201ENST00000520348 AKAP17AQ02040 695 aaKnown RBP18.56■□□□□ 0.56
SNHG6-201ENST00000520348 TNFAIP1Q13829 316 aa18.56■□□□□ 0.56
SNHG6-201ENST00000520348 RRP1BQ14684 758 aaKnown RBP18.56■□□□□ 0.56
SNHG6-201ENST00000520348 SIAH1Q8IUQ4 282 aa18.56■□□□□ 0.56
SNHG6-201ENST00000520348 TEPSINQ96N21 525 aa18.56■□□□□ 0.56
SNHG6-201ENST00000520348 PHF20Q9BVI0 1012 aa18.56■□□□□ 0.56
SNHG6-201ENST00000520348 FOXP1Q9H334 677 aaPredicted RBP18.56■□□□□ 0.56
SNHG6-201ENST00000520348 VEZTQ9HBM0 779 aa18.56■□□□□ 0.56
SNHG6-201ENST00000520348 GPRC5DQ9NZD1 345 aa18.56■□□□□ 0.56
SNHG6-201ENST00000520348 RCOR1Q9UKL0 485 aa18.56■□□□□ 0.56
SNHG6-201ENST00000520348 DDX49Q9Y6V7 483 aaKnown RBP18.56■□□□□ 0.56
SNHG6-201ENST00000520348 V9GY48 417 aaPredicted RBP18.56■□□□□ 0.56
SNHG6-201ENST00000520348 GADD45BO75293 160 aaPredicted RBP18.55■□□□□ 0.56
SNHG6-201ENST00000520348 SCG2P13521 617 aa18.55■□□□□ 0.56
SNHG6-201ENST00000520348 NASPP49321 788 aaPredicted RBP18.55■□□□□ 0.56
SNHG6-201ENST00000520348 NPY5RQ15761 445 aa18.55■□□□□ 0.56
SNHG6-201ENST00000520348 ABCB5Q2M3G0 1257 aa18.55■□□□□ 0.56
SNHG6-201ENST00000520348 KIF4BQ2VIQ3 1234 aa18.55■□□□□ 0.56
SNHG6-201ENST00000520348 CLEC10AQ8IUN9 316 aa18.55■□□□□ 0.56
SNHG6-201ENST00000520348 CCDC82Q8N4S0 544 aa18.55■□□□□ 0.56
SNHG6-201ENST00000520348 USP28Q96RU2 1077 aa18.55■□□□□ 0.56
SNHG6-201ENST00000520348 TMEM39BQ9GZU3 492 aa18.55■□□□□ 0.56
SNHG6-201ENST00000520348 SH3GLB2Q9NR46 395 aa18.55■□□□□ 0.56
SNHG6-201ENST00000520348 POLR3EQ9NVU0 708 aa18.55■□□□□ 0.56
SNHG6-201ENST00000520348 RTEL1Q9NZ71 1219 aa18.55■□□□□ 0.56
SNHG6-201ENST00000520348 GJA3Q9Y6H8 435 aa18.55■□□□□ 0.56
SNHG6-201ENST00000520348 KLRF2D3W0D1 207 aa18.54■□□□□ 0.56
SNHG6-201ENST00000520348 XBP1P17861 261 aa18.54■□□□□ 0.56
SNHG6-201ENST00000520348 NCLP19338 710 aaKnown RBP18.54■□□□□ 0.56
SNHG6-201ENST00000520348 JAG1P78504 1218 aa18.54■□□□□ 0.56
SNHG6-201ENST00000520348 ZNF543Q08ER8 600 aa18.54■□□□□ 0.56
SNHG6-201ENST00000520348 LRRC47Q8N1G4 583 aaKnown RBP18.54■□□□□ 0.56
SNHG6-201ENST00000520348 RIOX1Q9H6W3 641 aa18.54■□□□□ 0.56
SNHG6-201ENST00000520348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.54■□□□□ 0.56
SNHG6-201ENST00000520348 CLIP2Q9UDT6 1046 aa18.54■□□□□ 0.56
SNHG6-201ENST00000520348 USP17L5A8MUK1 530 aa18.53■□□□□ 0.56
SNHG6-201ENST00000520348 MPHOSPH10O00566 681 aaKnown RBP18.53■□□□□ 0.56
SNHG6-201ENST00000520348 YEATS4O95619 227 aa18.53■□□□□ 0.56
SNHG6-201ENST00000520348 RASA3Q14644 834 aa18.53■□□□□ 0.56
SNHG6-201ENST00000520348 SEPT2Q15019 361 aa18.53■□□□□ 0.56
SNHG6-201ENST00000520348 SAFBQ15424 915 aaKnown RBP eCLIP18.53■□□□□ 0.56
SNHG6-201ENST00000520348 SHROOM1Q2M3G4 852 aaPredicted RBP18.53■□□□□ 0.56
SNHG6-201ENST00000520348 RBM26Q5T8P6 1007 aaKnown RBP18.53■□□□□ 0.56
SNHG6-201ENST00000520348 RASGRP2Q7LDG7 609 aa18.53■□□□□ 0.56
SNHG6-201ENST00000520348 CDAN1Q8IWY9 1227 aa18.53■□□□□ 0.56
SNHG6-201ENST00000520348 DIS3L2Q8IYB7 885 aaKnown RBP18.53■□□□□ 0.56
SNHG6-201ENST00000520348 GMCL1P1Q8NEA9 526 aa18.53■□□□□ 0.56
SNHG6-201ENST00000520348 TNFRSF25Q93038 417 aa18.53■□□□□ 0.56
SNHG6-201ENST00000520348 SPATA32Q96LK8 384 aa18.53■□□□□ 0.56
SNHG6-201ENST00000520348 H7C1D1 291 aa18.52■□□□□ 0.56
SNHG6-201ENST00000520348 EEF2P13639 858 aaKnown RBP18.52■□□□□ 0.56
SNHG6-201ENST00000520348 ICA1Q05084 483 aa18.52■□□□□ 0.56
SNHG6-201ENST00000520348 GPATCH4Q5T3I0 446 aaKnown RBP18.52■□□□□ 0.56
SNHG6-201ENST00000520348 USP17L2Q6R6M4 530 aa18.52■□□□□ 0.56
SNHG6-201ENST00000520348 SAMD7Q7Z3H4 446 aa18.52■□□□□ 0.56
SNHG6-201ENST00000520348 NOSTRINQ8IVI9 506 aa18.52■□□□□ 0.56
SNHG6-201ENST00000520348 DCAF4Q8WV16 495 aa18.52■□□□□ 0.56
SNHG6-201ENST00000520348 GINM1Q9NU53 330 aa18.52■□□□□ 0.56
SNHG6-201ENST00000520348 VPS54Q9P1Q0 977 aa18.52■□□□□ 0.56
SNHG6-201ENST00000520348 TFIP11Q9UBB9 837 aaKnown RBP18.52■□□□□ 0.56
SNHG6-201ENST00000520348 KCNJ14Q9UNX9 436 aa18.52■□□□□ 0.56
SNHG6-201ENST00000520348 MORC2Q9Y6X9 1032 aaPredicted RBP18.52■□□□□ 0.56
SNHG6-201ENST00000520348 hCG_1984214I3L0E3 225 aa18.51■□□□□ 0.55
SNHG6-201ENST00000520348 GDF11O95390 407 aa18.51■□□□□ 0.55
SNHG6-201ENST00000520348 GH2P01242 217 aa18.51■□□□□ 0.55
SNHG6-201ENST00000520348 TBC1D10BQ4KMP7 808 aaPredicted RBP18.51■□□□□ 0.55
SNHG6-201ENST00000520348 ZNF713Q8N859 430 aaPredicted RBP18.51■□□□□ 0.55
SNHG6-201ENST00000520348 DAGLBQ8NCG7 672 aa18.51■□□□□ 0.55
SNHG6-201ENST00000520348 MTMR8Q96EF0 704 aa18.51■□□□□ 0.55
SNHG6-201ENST00000520348 GMCL1Q96IK5 515 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms