RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 TTC6Q86TZ1 520 aa10.63□□□□□ -0.71
TRIM35-202ENST00000519219 LCORLQ8N3X6 602 aa10.63□□□□□ -0.71
TRIM35-202ENST00000519219 DYNLL2Q96FJ2 89 aa10.63□□□□□ -0.71
TRIM35-202ENST00000519219 MOV10L1Q9BXT6 1211 aaKnown RBP10.63□□□□□ -0.71
TRIM35-202ENST00000519219 BCL11AQ9H165 835 aa10.63□□□□□ -0.71
TRIM35-202ENST00000519219 ZNF532Q9HCE3 1301 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 CYP2D7A0A087X1C5 515 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 PRKAB2O43741 272 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 POLR3DP05423 398 aaPredicted RBP10.62□□□□□ -0.71
TRIM35-202ENST00000519219 HOXC6P09630 235 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 ADORA2AP29274 412 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 CCNA1P78396 465 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 ATP2B2Q01814 1243 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 PRAMEF19Q5SWL8 479 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 GJC2Q5T442 439 aaPredicted RBP10.62□□□□□ -0.71
TRIM35-202ENST00000519219 GPR153Q6NV75 609 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 SIAH1Q8IUQ4 282 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 FAM161BQ96MY7 647 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 GUCD1Q96NT3 240 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 MCM9Q9NXL9 1143 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 STXBP5LQ9Y2K9 1186 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 MCM3APO60318 1980 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 UNC80Q8N2C7 3258 aa10.62□□□□□ -0.71
TRIM35-202ENST00000519219 GOLIM4O00461 696 aa10.61□□□□□ -0.71
TRIM35-202ENST00000519219 MPHOSPH10O00566 681 aaKnown RBP10.61□□□□□ -0.71
TRIM35-202ENST00000519219 AKR1B1P15121 316 aa10.61□□□□□ -0.71
TRIM35-202ENST00000519219 RTP1P59025 263 aa10.61□□□□□ -0.71
TRIM35-202ENST00000519219 HNRNPUQ00839 825 aaKnown RBP eCLIP10.61□□□□□ -0.71
TRIM35-202ENST00000519219 SLC9C2Q5TAH2 1124 aa10.61□□□□□ -0.71
TRIM35-202ENST00000519219 SAMD1Q6SPF0 538 aaPredicted RBP10.61□□□□□ -0.71
TRIM35-202ENST00000519219 SPICE1Q8N0Z3 855 aa10.61□□□□□ -0.71
TRIM35-202ENST00000519219 RHPN1Q8TCX5 695 aa10.61□□□□□ -0.71
TRIM35-202ENST00000519219 LPAR1Q92633 364 aa10.61□□□□□ -0.71
TRIM35-202ENST00000519219 ATG4CQ96DT6 458 aa10.61□□□□□ -0.71
TRIM35-202ENST00000519219 DNAJC2Q99543 621 aaKnown RBP10.61□□□□□ -0.71
TRIM35-202ENST00000519219 TANGO6Q9C0B7 1094 aa10.61□□□□□ -0.71
TRIM35-202ENST00000519219 ARMT1Q9H993 441 aa10.61□□□□□ -0.71
TRIM35-202ENST00000519219 CABP5Q9NP86 173 aa10.61□□□□□ -0.71
TRIM35-202ENST00000519219 DCP1AQ9NPI6 582 aaPredicted RBP10.61□□□□□ -0.71
TRIM35-202ENST00000519219 IVNS1ABPQ9Y6Y0 642 aa10.61□□□□□ -0.71
TRIM35-202ENST00000519219 EYSQ5T1H1 3165 aa10.61□□□□□ -0.71
TRIM35-202ENST00000519219 GREB1LQ9C091 1923 aaPredicted RBP10.6□□□□□ -0.71
TRIM35-202ENST00000519219 IGSF3O75054 1194 aa10.6□□□□□ -0.71
TRIM35-202ENST00000519219 GLRX3O76003 335 aaKnown RBP10.6□□□□□ -0.71
TRIM35-202ENST00000519219 ERCC3P19447 782 aa10.6□□□□□ -0.71
TRIM35-202ENST00000519219 C9orf50Q5SZB4 431 aa10.6□□□□□ -0.71
TRIM35-202ENST00000519219 SIRT2Q8IXJ6 389 aa10.6□□□□□ -0.71
TRIM35-202ENST00000519219 CRNKL1Q9BZJ0 848 aaKnown RBP10.6□□□□□ -0.71
TRIM35-202ENST00000519219 SPATC1LQ9H0A9 340 aa10.6□□□□□ -0.71
TRIM35-202ENST00000519219 ATP11BQ9Y2G3 1177 aa10.6□□□□□ -0.71
TRIM35-202ENST00000519219 POTEB2H3BUK9 544 aa10.59□□□□□ -0.71
TRIM35-202ENST00000519219 DNM1LO00429 736 aa10.59□□□□□ -0.71
TRIM35-202ENST00000519219 MBD4O95243 580 aa10.59□□□□□ -0.71
TRIM35-202ENST00000519219 MYCNP04198 464 aaPredicted RBP10.59□□□□□ -0.71
TRIM35-202ENST00000519219 PLS1Q14651 629 aa10.59□□□□□ -0.71
TRIM35-202ENST00000519219 COG2Q14746 738 aa10.59□□□□□ -0.71
TRIM35-202ENST00000519219 TRIM60Q495X7 471 aa10.59□□□□□ -0.71
TRIM35-202ENST00000519219 FAM47AQ5JRC9 791 aa10.59□□□□□ -0.71
TRIM35-202ENST00000519219 OLFML2BQ68BL8 750 aa10.59□□□□□ -0.71
TRIM35-202ENST00000519219 SH3RF1Q7Z6J0 888 aa10.59□□□□□ -0.71
TRIM35-202ENST00000519219 DPP9Q86TI2 863 aa10.59□□□□□ -0.71
TRIM35-202ENST00000519219 CERS3Q8IU89 383 aa10.59□□□□□ -0.71
TRIM35-202ENST00000519219 FERMT2Q96AC1 680 aa10.59□□□□□ -0.71
TRIM35-202ENST00000519219 LENG1Q96BZ8 264 aaPredicted RBP10.59□□□□□ -0.71
TRIM35-202ENST00000519219 FBXO28Q9NVF7 368 aa10.59□□□□□ -0.71
TRIM35-202ENST00000519219 PRUNE2Q8WUY3 3088 aa10.59□□□□□ -0.71
TRIM35-202ENST00000519219 MYH4Q9Y623 1939 aa10.58□□□□□ -0.72
TRIM35-202ENST00000519219 TAL1P17542 331 aaPredicted RBP10.58□□□□□ -0.72
TRIM35-202ENST00000519219 DSG3P32926 999 aa10.58□□□□□ -0.72
TRIM35-202ENST00000519219 TMEM132BQ14DG7 1078 aa10.58□□□□□ -0.72
TRIM35-202ENST00000519219 SHHQ15465 462 aa10.58□□□□□ -0.72
TRIM35-202ENST00000519219 SLC39A5Q6ZMH5 540 aa10.58□□□□□ -0.72
TRIM35-202ENST00000519219 NCAPG2Q86XI2 1143 aa10.58□□□□□ -0.72
TRIM35-202ENST00000519219 ERC1Q8IUD2 1116 aa10.58□□□□□ -0.72
TRIM35-202ENST00000519219 TRIM43BA6NCK2 446 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 SEPT4O43236 478 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 MSCO60682 206 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 FLOT1O75955 427 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 PGK2P07205 417 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 ITGB8P26012 769 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 ADD2P35612 726 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 ADCYAP1R1P41586 468 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 ICA1Q05084 483 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 LRRC41Q15345 812 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 TTF1Q15361 905 aaPredicted RBP10.57□□□□□ -0.72
TRIM35-202ENST00000519219 TMEM179Q6ZVK1 233 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 MIER1Q8N108 512 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 SHCBP1Q8NEM2 672 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 BADQ92934 168 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 TRIM43Q96BQ3 446 aaPredicted RBP10.57□□□□□ -0.72
TRIM35-202ENST00000519219 MAML3Q96JK9 1138 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 LBHD1Q9BQE6 289 aaPredicted RBP10.57□□□□□ -0.72
TRIM35-202ENST00000519219 COL25A1Q9BXS0 654 aaPredicted RBP10.57□□□□□ -0.72
TRIM35-202ENST00000519219 BOLA2Q9H3K6 86 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 PRDM5Q9NQX1 630 aaPredicted RBP10.57□□□□□ -0.72
TRIM35-202ENST00000519219 PDLIM7Q9NR12 457 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 HOXC10Q9NYD6 342 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 TMX2Q9Y320 296 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 MYO9BQ13459 2157 aa10.57□□□□□ -0.72
TRIM35-202ENST00000519219 KBTBD13C9JR72 458 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms