RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 MYH4Q9Y623 1939 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 MANSC4A6NHS7 340 aaPredicted RBP9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 CXCL11O14625 94 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 IRF6O14896 467 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 AOC2O75106 756 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 CYP21A2P08686 494 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 FGRP09769 529 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 CETPP11597 493 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 AKR1B1P15121 316 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ZKSCAN1P17029 563 aaPredicted RBP9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 INHBEP58166 350 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 TFAP4Q01664 338 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 SREBF2Q12772 1141 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 SNAPC2Q13487 334 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 SEPT2Q15019 361 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 PPP4R3BQ5MIZ7 849 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ZNF280CQ8ND82 737 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ESR2Q92731 530 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 WDR18Q9BV38 432 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 MCOLN1Q9GZU1 580 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 KANSL2Q9H9L4 492 aa9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.08□□□□□ -0.96
CSGALNACT1-206ENST00000518542 PTPRFP10586 1907 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 TRIM75PA6NK02 468 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 C19orf81C9J6K1 198 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 USP17L10C9JJH3 530 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 SLC27A2O14975 620 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 MCCP23508 829 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 GUCY1A2P33402 732 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 GJA5P36382 358 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 USP14P54578 494 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 JAG1P78504 1218 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 KIF23Q02241 960 aaPredicted RBP9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ICA1Q05084 483 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 SPP2Q13103 211 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 NECTIN1Q15223 517 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 CCDC178Q5BJE1 867 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 FAM47AQ5JRC9 791 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 CREB3L3Q68CJ9 461 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 OTUD7BQ6GQQ9 843 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 FASTKD5Q7L8L6 764 aaKnown RBP9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 RALYLQ86SE5 291 aaKnown RBP9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 TBC1D10CQ8IV04 446 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 NEDD1Q8NHV4 660 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 NCOA7Q8NI08 942 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 DDX27Q96GQ7 796 aaKnown RBP9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 FEZ1Q99689 392 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 NBPF3Q9H094 633 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 SH2D4AQ9H788 454 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ARHGEF10LQ9HCE6 1279 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 SCUBE2Q9NQ36 999 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 INCENPQ9NQS7 918 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 KCNH4Q9UQ05 1017 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 AFG3L2Q9Y4W6 797 aa9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 GREB1LQ9C091 1923 aaPredicted RBP9.07□□□□□ -0.96
CSGALNACT1-206ENST00000518542 NEDD4P46934 1319 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 CCL15-CCL14A0A0B4J2E2 113 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 B4E1Z4 1266 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 E7EWF7 191 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 KDM4AO75164 1064 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 BACE1P56817 501 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ATP2B2Q01814 1243 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 KRT32Q14532 448 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 MFSD10Q14728 455 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 CCL15Q16663 113 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 SHROOM1Q2M3G4 852 aaPredicted RBP9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 LHX8Q68G74 356 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 MAMSTRQ6ZN01 415 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 CCDC84Q86UT8 332 aaPredicted RBP9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 IQCA1Q86XH1 822 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 USP26Q9BXU7 913 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 TMOD4Q9NZQ9 345 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 NYAP2Q9P242 653 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 TACC3Q9Y6A5 838 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 PLIN4Q96Q06 1357 aa9.06□□□□□ -0.96
CSGALNACT1-206ENST00000518542 A0A0G2JLL6 359 aaPredicted RBP9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 TESPA1A2RU30 521 aaPredicted RBP9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 TTLL1O95922 423 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 ALDH1A1P00352 501 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 EEF2P13639 858 aaKnown RBP9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 HSPA4P34932 840 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 TM4SF4P48230 202 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 MTMR2Q13614 643 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 DSG2Q14126 1118 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 SART3Q15020 963 aaKnown RBP9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 TSGA10IPQ3SY00 556 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 C8orf34Q49A92 452 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 USP17L2Q6R6M4 530 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 GADL1Q6ZQY3 521 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 PRRT2Q7Z6L0 340 aaPredicted RBP9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 PROCA1Q8NCQ7 364 aaPredicted RBP9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 CEP95Q96GE4 821 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 UBAC1Q9BSL1 405 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 BEGAINQ9BUH8 593 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 KIAA1683Q9H0B3 1180 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 GOPCQ9HD26 462 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 TCP11L1Q9NUJ3 509 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 MTMR4Q9NYA4 1195 aa9.05□□□□□ -0.96
CSGALNACT1-206ENST00000518542 CLIP2Q9UDT6 1046 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms