RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 HIRAP54198 1017 aaPredicted RBP3.44□□□□□ -1.86
SKP1-204ENST00000517691 CENPCQ03188 943 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 DDR1Q08345 913 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 RBL2Q08999 1139 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 CLN3Q13286 438 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 TEAD4Q15561 434 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 TPTE2Q6XPS3 522 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 ATCAYQ86WG3 371 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 SLC43A3Q8NBI5 491 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 PLBD2Q8NHP8 589 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 FAM129BQ96TA1 746 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 IRF2BPLQ9H1B7 796 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 PCDH12Q9NPG4 1184 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 PGPEP1Q9NXJ5 209 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 WWC3Q9ULE0 1092 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 C5P01031 1676 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 PAPPAQ13219 1627 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 A0A0G2JLW4 131 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 PI4KAP2A4QPH2 592 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 GPR182O15218 404 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 NDUFB5O43674 189 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 NOS2P35228 1153 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 CTSOP43234 321 aaPredicted RBP3.43□□□□□ -1.86
SKP1-204ENST00000517691 ST5P78524 1137 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 PLCB3Q01970 1234 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 TLR1Q15399 786 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 GPR162Q16538 588 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 HSP90AB3PQ58FF7 597 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 FOXR1Q6PIV2 292 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 Q6ZVU0 165 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 G2E3Q7L622 706 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 LRP10Q7Z4F1 713 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 PPP1R42Q7Z4L9 355 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 FILIP1Q7Z7B0 1213 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 ETFBKMTQ8IXQ9 262 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 PI4KAP1Q8N8J0 262 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 CNBD1Q8NA66 436 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 NLGN2Q8NFZ4 835 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 C7orf43Q8WVR3 580 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 MYD88Q99836 296 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 SYT17Q9BSW7 474 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 UBA5Q9GZZ9 404 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 SMC4Q9NTJ3 1288 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 HCN4Q9Y3Q4 1203 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 CD2APQ9Y5K6 639 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 SERTM1A2A2V5 107 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 H0YIN7 160 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 SH3BP5O60239 455 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 CHRNA5P30532 468 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 PDE6BP35913 854 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 PTGIRP43119 386 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 RELBQ01201 579 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 TJP1Q07157 1748 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 EHHADHQ08426 723 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 NEXNQ0ZGT2 675 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 TCIRG1Q13488 830 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 PARP10Q53GL7 1025 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 SUSD4Q5VX71 490 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 ALKBH2Q6NS38 261 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 SLC4A10Q6U841 1118 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 KSR2Q6VAB6 950 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 LINC00114Q6XXX2 140 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 C2CD5Q86YS7 1000 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 TRMT2AQ8IZ69 625 aaKnown RBP3.43□□□□□ -1.86
SKP1-204ENST00000517691 ALDH16A1Q8IZ83 802 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 ZNF622Q969S3 477 aaKnown RBP eCLIP3.43□□□□□ -1.862e-20■□□□□ 9.4
SKP1-204ENST00000517691 UTP14AQ9BVJ6 771 aaKnown RBP3.43□□□□□ -1.86
SKP1-204ENST00000517691 NYXQ9GZU5 481 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 TRMT112Q9UI30 125 aaKnown RBP3.43□□□□□ -1.86
SKP1-204ENST00000517691 MAP3K2Q9Y2U5 619 aa3.43□□□□□ -1.86
SKP1-204ENST00000517691 DLG5Q8TDM6 1919 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 ZBED9Q6R2W3 1325 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 CARMIL3Q8ND23 1372 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 SIPA1L3O60292 1781 aaPredicted RBP3.42□□□□□ -1.86
SKP1-204ENST00000517691 F6X3S4 739 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 DPEP1P16444 411 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 RHBDL3P58872 404 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 TGFB2P61812 414 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 FANCCQ00597 558 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 AAMPQ13685 434 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 C11orf91Q3C1V1 193 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 ZFYVE27Q5T4F4 411 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 PRR5LQ6MZQ0 368 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 NLRP10Q86W26 655 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 FMNL3Q8IVF7 1028 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 ZNF34Q8IZ26 560 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 GJD3Q8N144 294 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 SSH1Q8WYL5 1049 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 JARID2Q92833 1246 aaPredicted RBP3.42□□□□□ -1.86
SKP1-204ENST00000517691 FRAT1Q92837 279 aaPredicted RBP3.42□□□□□ -1.86
SKP1-204ENST00000517691 FAM89AQ96GI7 184 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 INSM2Q96T92 566 aaPredicted RBP3.42□□□□□ -1.86
SKP1-204ENST00000517691 METTL22Q9BUU2 404 aaPredicted RBP3.42□□□□□ -1.86
SKP1-204ENST00000517691 BRIP1Q9BX63 1249 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 TGIF2Q9GZN2 237 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 OSBPL2Q9H1P3 480 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 CCSER2Q9H7U1 834 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 TPSG1Q9NRR2 321 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 KLK14Q9P0G3 267 aa3.42□□□□□ -1.86
SKP1-204ENST00000517691 PARP2Q9UGN5 583 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms