RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 RNF214Q8ND24 703 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 CCDC26Q8TAB7 109 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 SHKBP1Q8TBC3 707 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 SLC7A3Q8WY07 619 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 CRACR2AQ9BSW2 395 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 THUMPD2Q9BTF0 503 aaKnown RBP5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 SRRTQ9BXP5 876 aaKnown RBP5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 RANBP17Q9H2T7 1088 aaKnown RBP5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 KCNF1Q9H3M0 494 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 INCENPQ9NQS7 918 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 BATF3Q9NR55 127 aa5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 BIN2Q9UBW5 565 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 FOXD3Q9UJU5 478 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P19-201ENST00000517578 ANKRD36BQ8N2N9 1353 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 GOLGA6L19H0YKK7 550 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 SART1O43290 800 aaKnown RBP5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 NDUFB5O43674 189 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 PHACTR2O75167 634 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 TNFRSF21O75509 655 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 NEBLO76041 1014 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 SLU7O95391 586 aaKnown RBP5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 IMPDH2P12268 514 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 POLD1P28340 1107 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 DDR1Q08345 913 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 EHHADHQ08426 723 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 ECM1Q16610 540 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 NBPF8Q3BBV2 869 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 DNAJC21Q5F1R6 531 aaKnown RBP5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 SPATS2Q86XZ4 545 aaKnown RBP5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 TMEM102Q8N9M5 508 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 LSM14AQ8ND56 463 aaKnown RBP5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 BORCS6Q96GS4 357 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 RUSC1Q9BVN2 902 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 TMX1Q9H3N1 280 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 IRAK4Q9NWZ3 460 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 HIF3AQ9Y2N7 669 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 SCAF11Q99590 1463 aaKnown RBP5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 SOGA1O94964 1423 aa5.56□□□□□ -1.52
HMGB1P19-201ENST00000517578 ABCC8Q09428 1581 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 MEGF11A6BM72 1044 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 SOWAHDA6NJG2 315 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 EIF3CLB5ME19 914 aaKnown RBP5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 SOX1O00570 391 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 EREGO14944 169 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 ERLIN1O75477 346 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 SNUPNO95149 360 aaKnown RBP5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 HOXA10P31260 410 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 ELF1P32519 619 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 MRPL12P52815 198 aaKnown RBP5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 ARHGAP4P98171 946 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 MLECQ14165 292 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 PDIA5Q14554 519 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 SLMAPQ14BN4 828 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 SGO2Q562F6 1265 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 FDX2Q6P4F2 183 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 DDX46Q7L014 1031 aaKnown RBP5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 VN1R5Q7Z5H4 357 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 TADA2BQ86TJ2 420 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 APLFQ8IW19 511 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 WDR63Q8IWG1 891 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 RBM12BQ8IXT5 1001 aaKnown RBP5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 GJD3Q8N144 294 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 DRAXINQ8NBI3 349 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 EIF3CQ99613 913 aaKnown RBP5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 ZKSCAN3Q9BRR0 538 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 LMBRD1Q9NUN5 540 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 ZNF446Q9NWS9 450 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 SYNPO2Q9UMS6 1093 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 RPS6KL1Q9Y6S9 549 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 SYNJ1O43426 1573 aa5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 EIF4G1Q04637 1599 aaKnown RBP5.55□□□□□ -1.52
HMGB1P19-201ENST00000517578 PTPRCP08575 1304 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 BTBD11A6QL63 1104 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 WDR64B1ANS9 1081 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 CHUKO15111 745 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 SASH1O94885 1247 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 ADCY5O95622 1261 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 POLR3DP05423 398 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 TUBBP07437 444 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 PECAM1P16284 738 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 NAP1L1P55209 391 aaKnown RBP5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 SLC8A3P57103 927 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 PSMC1P62191 440 aaKnown RBP5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 C19orf57Q0VDD7 668 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 GRIK3Q13003 919 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 SART3Q15020 963 aaKnown RBP5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 SF3A1Q15459 793 aaKnown RBP5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 SLC5A9Q2M3M2 681 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 RGL3Q3MIN7 710 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 AMOTQ4VCS5 1084 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 C1QTNF12Q5T7M4 302 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 CTCFLQ8NI51 663 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 CXorf38Q8TB03 319 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 BICD2Q8TD16 824 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 SNX29Q8TEQ0 813 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 PMEPA1Q969W9 287 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 NXPE3Q969Y0 559 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 CCDC34Q96HJ3 373 aa5.54□□□□□ -1.52
HMGB1P19-201ENST00000517578 CFAP53Q96M91 514 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms