RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 GUCY1A2P33402 732 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 ATP2B2Q01814 1243 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 GNL2Q13823 731 aaKnown RBP8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 SAFBQ15424 915 aaKnown RBP eCLIP8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 ABCB5Q2M3G0 1257 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 KIF4BQ2VIQ3 1234 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 ATL3Q6DD88 541 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 FAM173BQ6P4H8 233 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 SAMD7Q7Z3H4 446 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 BRAPQ7Z569 592 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 USP48Q86UV5 1035 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CLEC10AQ8IUN9 316 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 LRRC47Q8N1G4 583 aaKnown RBP8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 SRBD1Q8N5C6 995 aaKnown RBP8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 ZNF396Q96N95 335 aaPredicted RBP8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 KANSL2Q9H9L4 492 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 GDPD2Q9HCC8 539 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CABP5Q9NP86 173 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 GJB4Q9NTQ9 266 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 RNF181Q9P0P0 153 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CLIP2Q9UDT6 1046 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 MAD2L2Q9UI95 211 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 CFAP45Q9UL16 551 aa8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 DDX49Q9Y6V7 483 aaKnown RBP8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 V9GY48 417 aaPredicted RBP8.84□□□□□ -0.99
SCARNA20.1-201ENST00000516009 POLR2AP24928 1970 aaKnown RBP8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 UBE2Q2LH0YL09 131 aa8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 TBC1D12O60347 775 aa8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 MBD3O95983 291 aa8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 EGFRP00533 1210 aa8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 MMP1P03956 469 aa8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 KIF23Q02241 960 aaPredicted RBP8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 RASA3Q14644 834 aa8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 SEPT2Q15019 361 aa8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 KLHL40Q2TBA0 621 aa8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 ASPRV1Q53RT3 343 aa8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 STAG2Q8N3U4 1231 aa8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 TMEM39BQ9GZU3 492 aa8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 SCAND2PQ9GZW5 306 aaPredicted RBP8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 GPRC5DQ9NZD1 345 aa8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 NYAP2Q9P242 653 aa8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 TFIP11Q9UBB9 837 aaKnown RBP8.83□□□□□ -1
SCARNA20.1-201ENST00000516009 ELP1O95163 1332 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 hCG_1642624A0A1W2PR95 340 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 USP17L5A8MUK1 530 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 KLRF2D3W0D1 207 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 GDF11O95390 407 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 GH2P01242 217 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 GOLGA8HP0CJ92 632 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 SNHG28P0DPA3 235 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 PDHBP11177 359 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 SCG2P13521 617 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 EEF2P13639 858 aaKnown RBP8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 SMARCA1P28370 1054 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 ICA1Q05084 483 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 PKN1Q16512 942 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 PFKFB3Q16875 520 aaPredicted RBP8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 USP17L2Q6R6M4 530 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 APOBEC3FQ8IUX4 373 aaKnown RBP8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 MKL1Q969V6 931 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 SPATA32Q96LK8 384 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 SPZ1Q9BXG8 430 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 PGAP2Q9UHJ9 254 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 HACL1Q9UJ83 578 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 KCNJ14Q9UNX9 436 aa8.82□□□□□ -1
SCARNA20.1-201ENST00000516009 KIF28PB7ZC32 967 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 GADD45BO75293 160 aaPredicted RBP8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 U2AF2P26368 475 aaKnown RBP eCLIP8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 LMOD1P29536 600 aaPredicted RBP8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 UBE2HP62256 183 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 MAP3K10Q02779 954 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 ZNF543Q08ER8 600 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 RRP1BQ14684 758 aaKnown RBP8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 GPR162Q16538 588 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 CCDC96Q2M329 555 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 SHROOM1Q2M3G4 852 aaPredicted RBP8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 GPATCH4Q5T3I0 446 aaKnown RBP8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 MYSM1Q5VVJ2 828 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 C9orf131Q5VYM1 1079 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 MIGA2Q7L4E1 593 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 RASGRP2Q7LDG7 609 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 CDAN1Q8IWY9 1227 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 DIS3L2Q8IYB7 885 aaKnown RBP8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 GPT2Q8TD30 523 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 DCAF4Q8WV16 495 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 LEO1Q8WVC0 666 aaPredicted RBP8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 PIBF1Q8WXW3 757 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 RRP36Q96EU6 259 aaKnown RBP8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 USP28Q96RU2 1077 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 DEFB129Q9H1M3 183 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 FOXP1Q9H334 677 aaPredicted RBP8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 ARHGEF10LQ9HCE6 1279 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 BRMS1Q9HCU9 246 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 VPS54Q9P1Q0 977 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 SEC63Q9UGP8 760 aaKnown RBP8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 ZBTB21Q9ULJ3 1066 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 SYNPO2Q9UMS6 1093 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 DOCK1Q14185 1865 aa8.81□□□□□ -1
SCARNA20.1-201ENST00000516009 ASTN2O75129 1339 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms