RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 KIF22Q14807 665 aa30.7■■■□□ 2.51
DDR1-279ENST00000515529 ESR2Q92731 530 aa30.7■■■□□ 2.51
DDR1-279ENST00000515529 NBPF3Q9H094 633 aa30.7■■■□□ 2.51
DDR1-279ENST00000515529 MTMR4Q9NYA4 1195 aa30.7■■■□□ 2.51
DDR1-279ENST00000515529 C17orf99Q6UX52 265 aa30.69■■■□□ 2.5
DDR1-279ENST00000515529 RPAP3Q9H6T3 665 aaPredicted RBP30.69■■■□□ 2.5
DDR1-279ENST00000515529 ANO2Q9NQ90 1003 aa30.69■■■□□ 2.5
DDR1-279ENST00000515529 TACC3Q9Y6A5 838 aa30.69■■■□□ 2.5
DDR1-279ENST00000515529 GCLCP48506 637 aaPredicted RBP30.68■■■□□ 2.5
DDR1-279ENST00000515529 NT5C2P49902 561 aa30.68■■■□□ 2.5
DDR1-279ENST00000515529 ARHGEF6Q15052 776 aa30.68■■■□□ 2.5
DDR1-279ENST00000515529 SPICE1Q8N0Z3 855 aa30.68■■■□□ 2.5
DDR1-279ENST00000515529 TANGO6Q9C0B7 1094 aa30.68■■■□□ 2.5
DDR1-279ENST00000515529 GREB1LQ9C091 1923 aaPredicted RBP30.68■■■□□ 2.5
DDR1-279ENST00000515529 ADGRA2Q96PE1 1338 aa30.68■■■□□ 2.5
DDR1-279ENST00000515529 STX8Q9UNK0 236 aa30.67■■■□□ 2.5
DDR1-279ENST00000515529 LAMA4Q16363 1823 aa30.67■■■□□ 2.5
DDR1-279ENST00000515529 CTU1Q7Z7A3 348 aaKnown RBP30.66■■■□□ 2.5
DDR1-279ENST00000515529 CD99L2Q8TCZ2 262 aa30.66■■■□□ 2.5
DDR1-279ENST00000515529 GTF3C2Q8WUA4 911 aaPredicted RBP30.66■■■□□ 2.5
DDR1-279ENST00000515529 MAP4K1Q92918 833 aa30.66■■■□□ 2.5
DDR1-279ENST00000515529 KRT23Q9C075 422 aa30.66■■■□□ 2.5
DDR1-279ENST00000515529 CNNM2Q9H8M5 875 aa30.66■■■□□ 2.5
DDR1-279ENST00000515529 NEDD4P46934 1319 aa30.66■■■□□ 2.5
DDR1-279ENST00000515529 WDR46O15213 610 aaKnown RBP30.65■■■□□ 2.5
DDR1-279ENST00000515529 CATSPERGQ6ZRH7 1159 aa30.65■■■□□ 2.5
DDR1-279ENST00000515529 P2RX7Q99572 595 aaKnown RBP30.65■■■□□ 2.5
DDR1-279ENST00000515529 SYNPO2Q9UMS6 1093 aa30.65■■■□□ 2.5
DDR1-279ENST00000515529 RBM8AQ9Y5S9 174 aaKnown RBP30.65■■■□□ 2.5
DDR1-279ENST00000515529 BCRP11274 1271 aa30.64■■■□□ 2.5
DDR1-279ENST00000515529 HERVK_113P62684 666 aa30.64■■■□□ 2.5
DDR1-279ENST00000515529 TRDNQ13061 729 aa30.64■■■□□ 2.5
DDR1-279ENST00000515529 LRRC47Q8N1G4 583 aaKnown RBP30.64■■■□□ 2.5
DDR1-279ENST00000515529 ANKRD13CQ8N6S4 541 aa30.64■■■□□ 2.5
DDR1-279ENST00000515529 MKL1Q969V6 931 aa30.64■■■□□ 2.5
DDR1-279ENST00000515529 LSG1Q9H089 658 aaKnown RBP30.64■■■□□ 2.5
DDR1-279ENST00000515529 NMT2O60551 498 aa30.62■■■□□ 2.49
DDR1-279ENST00000515529 KDM4AO75164 1064 aa30.62■■■□□ 2.49
DDR1-279ENST00000515529 LACTBP83111 547 aaPredicted RBP30.62■■■□□ 2.49
DDR1-279ENST00000515529 KIAA1755Q5JYT7 1200 aa30.62■■■□□ 2.49
DDR1-279ENST00000515529 IQCA1Q86XH1 822 aa30.62■■■□□ 2.49
DDR1-279ENST00000515529 TNS4Q8IZW8 715 aa30.62■■■□□ 2.49
DDR1-279ENST00000515529 IL17RBQ9NRM6 502 aa30.62■■■□□ 2.49
DDR1-279ENST00000515529 TCP11L1Q9NUJ3 509 aa30.62■■■□□ 2.49
DDR1-279ENST00000515529 B4E1Z4 1266 aa30.61■■■□□ 2.49
DDR1-279ENST00000515529 F5H6K3 240 aa30.61■■■□□ 2.49
DDR1-279ENST00000515529 CYP21A2P08686 494 aa30.61■■■□□ 2.49
DDR1-279ENST00000515529 KLRC3Q07444 240 aa30.61■■■□□ 2.49
DDR1-279ENST00000515529 FAM110CQ1W6H9 321 aa30.61■■■□□ 2.49
DDR1-279ENST00000515529 CCDC178Q5BJE1 867 aa30.61■■■□□ 2.49
DDR1-279ENST00000515529 EFCC1Q9HA90 598 aa30.61■■■□□ 2.49
DDR1-279ENST00000515529 TRIM17Q9Y577 477 aa30.61■■■□□ 2.49
DDR1-279ENST00000515529 FLOT1O75955 427 aa30.6■■■□□ 2.49
DDR1-279ENST00000515529 ECM2O94769 699 aaPredicted RBP30.6■■■□□ 2.49
DDR1-279ENST00000515529 COG2Q14746 738 aa30.6■■■□□ 2.49
DDR1-279ENST00000515529 SAMD1Q6SPF0 538 aaPredicted RBP30.6■■■□□ 2.49
DDR1-279ENST00000515529 RALYLQ86SE5 291 aaKnown RBP30.6■■■□□ 2.49
DDR1-279ENST00000515529 HOXC10Q9NYD6 342 aa30.6■■■□□ 2.49
DDR1-279ENST00000515529 ISY1Q9ULR0 285 aaKnown RBP30.6■■■□□ 2.49
DDR1-279ENST00000515529 NDUFB10O96000 172 aa30.59■■■□□ 2.49
DDR1-279ENST00000515529 FAM83BQ5T0W9 1011 aa30.59■■■□□ 2.49
DDR1-279ENST00000515529 GMCL1P1Q8NEA9 526 aa30.59■■■□□ 2.49
DDR1-279ENST00000515529 PAGR1Q9BTK6 254 aa30.59■■■□□ 2.49
DDR1-279ENST00000515529 MYH4Q9Y623 1939 aa30.59■■■□□ 2.49
DDR1-279ENST00000515529 FMNL1O95466 1100 aaPredicted RBP30.58■■■□□ 2.49
DDR1-279ENST00000515529 PKN2Q16513 984 aaKnown RBP30.58■■■□□ 2.49
DDR1-279ENST00000515529 SLFN13Q68D06 897 aa30.58■■■□□ 2.49
DDR1-279ENST00000515529 PSMC4P43686 418 aa30.57■■■□□ 2.48
DDR1-279ENST00000515529 FCGRTP55899 365 aa30.57■■■□□ 2.48
DDR1-279ENST00000515529 RNF20Q5VTR2 975 aa30.57■■■□□ 2.48
DDR1-279ENST00000515529 OTOP1Q7RTM1 612 aa30.57■■■□□ 2.48
DDR1-279ENST00000515529 GPRC5AQ8NFJ5 357 aa30.57■■■□□ 2.48
DDR1-279ENST00000515529 ZKSCAN3Q9BRR0 538 aa30.57■■■□□ 2.48
DDR1-279ENST00000515529 UBAC1Q9BSL1 405 aa30.57■■■□□ 2.48
DDR1-279ENST00000515529 SPDYE16A6NNV3 312 aaPredicted RBP30.56■■■□□ 2.48
DDR1-279ENST00000515529 TOP1P11387 765 aaKnown RBP30.56■■■□□ 2.48
DDR1-279ENST00000515529 CCAR1Q8IX12 1150 aaKnown RBP30.56■■■□□ 2.48
DDR1-279ENST00000515529 TTC14Q96N46 770 aa30.56■■■□□ 2.48
DDR1-279ENST00000515529 ARHGAP39Q9C0H5 1083 aa30.56■■■□□ 2.48
DDR1-279ENST00000515529 MORF4L1Q9UBU8 362 aa30.56■■■□□ 2.48
DDR1-279ENST00000515529 RABGAP1Q9Y3P9 1069 aa30.56■■■□□ 2.48
DDR1-279ENST00000515529 E7EWF7 191 aa30.55■■■□□ 2.48
DDR1-279ENST00000515529 REC8O95072 547 aa30.55■■■□□ 2.48
DDR1-279ENST00000515529 GNRH1P01148 92 aa30.55■■■□□ 2.48
DDR1-279ENST00000515529 HOXD10P28358 340 aa30.55■■■□□ 2.48
DDR1-279ENST00000515529 NCOA7Q8NI08 942 aa30.55■■■□□ 2.48
DDR1-279ENST00000515529 NUP88Q99567 741 aaPredicted RBP30.55■■■□□ 2.48
DDR1-279ENST00000515529 MCOLN1Q9GZU1 580 aa30.55■■■□□ 2.48
DDR1-279ENST00000515529 ZSWIM5Q9P217 1185 aa30.55■■■□□ 2.48
DDR1-279ENST00000515529 MTMR7Q9Y216 660 aa30.55■■■□□ 2.48
DDR1-279ENST00000515529 MYPNQ86TC9 1320 aa30.54■■■□□ 2.48
DDR1-279ENST00000515529 DSG3P32926 999 aa30.54■■■□□ 2.48
DDR1-279ENST00000515529 SLC1A4P43007 532 aa30.54■■■□□ 2.48
DDR1-279ENST00000515529 LBX2Q6XYB7 198 aa30.54■■■□□ 2.48
DDR1-279ENST00000515529 ZSCAN10Q96SZ4 725 aaPredicted RBP30.54■■■□□ 2.48
DDR1-279ENST00000515529 TMEM47Q9BQJ4 181 aa30.54■■■□□ 2.48
DDR1-279ENST00000515529 RBPJLQ9UBG7 517 aa30.54■■■□□ 2.48
DDR1-279ENST00000515529 SLC27A2O14975 620 aa30.53■■■□□ 2.48
DDR1-279ENST00000515529 BMP3P12645 472 aa30.53■■■□□ 2.48
DDR1-279ENST00000515529 NOVP48745 357 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms