RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 ICA1Q05084 483 aa16.6■□□□□ 0.25
ITGA3-214ENST00000514834 LRRFIP1Q32MZ4 808 aaKnown RBP16.6■□□□□ 0.25
ITGA3-214ENST00000514834 VPS53Q5VIR6 699 aa16.6■□□□□ 0.25
ITGA3-214ENST00000514834 COA7Q96BR5 231 aa16.6■□□□□ 0.25
ITGA3-214ENST00000514834 EVI5LQ96CN4 794 aa16.6■□□□□ 0.25
ITGA3-214ENST00000514834 FAM227BQ96M60 508 aa16.6■□□□□ 0.25
ITGA3-214ENST00000514834 TMEM106CQ9BVX2 250 aa16.6■□□□□ 0.25
ITGA3-214ENST00000514834 BIN2Q9UBW5 565 aaPredicted RBP16.6■□□□□ 0.25
ITGA3-214ENST00000514834 TMX2Q9Y320 296 aa16.6■□□□□ 0.25
ITGA3-214ENST00000514834 ROBO3Q96MS0 1386 aa16.6■□□□□ 0.25
ITGA3-214ENST00000514834 A0A0D9SFI3 127 aa16.59■□□□□ 0.25
ITGA3-214ENST00000514834 SPDYE16A6NNV3 312 aaPredicted RBP16.59■□□□□ 0.25
ITGA3-214ENST00000514834 CCL5P13501 91 aa16.59■□□□□ 0.25
ITGA3-214ENST00000514834 ATP2B2Q01814 1243 aa16.59■□□□□ 0.25
ITGA3-214ENST00000514834 IRF5Q13568 498 aa16.59■□□□□ 0.25
ITGA3-214ENST00000514834 ERICH6BQ5W0A0 696 aa16.59■□□□□ 0.25
ITGA3-214ENST00000514834 UNC93B1Q9H1C4 597 aa16.59■□□□□ 0.25
ITGA3-214ENST00000514834 INCENPQ9NQS7 918 aa16.59■□□□□ 0.25
ITGA3-214ENST00000514834 TACC3Q9Y6A5 838 aa16.59■□□□□ 0.25
ITGA3-214ENST00000514834 INHAP05111 366 aa16.58■□□□□ 0.24
ITGA3-214ENST00000514834 TRIM32Q13049 653 aa16.58■□□□□ 0.24
ITGA3-214ENST00000514834 SLAIN1Q8ND83 568 aa16.58■□□□□ 0.24
ITGA3-214ENST00000514834 SHISA4Q96DD7 197 aa16.58■□□□□ 0.24
ITGA3-214ENST00000514834 VCPKMTQ9H867 229 aa16.58■□□□□ 0.24
ITGA3-214ENST00000514834 MKNK2Q9HBH9 465 aa16.58■□□□□ 0.24
ITGA3-214ENST00000514834 ARHGEF10LQ9HCE6 1279 aa16.58■□□□□ 0.24
ITGA3-214ENST00000514834 RABGAP1Q9Y3P9 1069 aa16.58■□□□□ 0.24
ITGA3-214ENST00000514834 PARP14Q460N5 1801 aa16.57■□□□□ 0.24
ITGA3-214ENST00000514834 NMIQ13287 307 aaPredicted RBP16.57■□□□□ 0.24
ITGA3-214ENST00000514834 LBX2Q6XYB7 198 aa16.57■□□□□ 0.24
ITGA3-214ENST00000514834 PXYLP1Q8TE99 480 aa16.57■□□□□ 0.24
ITGA3-214ENST00000514834 TANGO6Q9C0B7 1094 aa16.57■□□□□ 0.24
ITGA3-214ENST00000514834 KANSL2Q9H9L4 492 aa16.57■□□□□ 0.24
ITGA3-214ENST00000514834 IGKV6D-41A0A0C4DH26 115 aa16.56■□□□□ 0.24
ITGA3-214ENST00000514834 TRIM6-TRIM34B2RNG4 842 aa16.56■□□□□ 0.24
ITGA3-214ENST00000514834 CYP2B6P20813 491 aa16.56■□□□□ 0.24
ITGA3-214ENST00000514834 PDE4AP27815 886 aa16.56■□□□□ 0.24
ITGA3-214ENST00000514834 CTDSPL2Q05D32 466 aa16.56■□□□□ 0.24
ITGA3-214ENST00000514834 COG2Q14746 738 aa16.56■□□□□ 0.24
ITGA3-214ENST00000514834 GPR142Q7Z601 462 aa16.56■□□□□ 0.24
ITGA3-214ENST00000514834 ZNF589Q86UQ0 364 aaPredicted RBP16.56■□□□□ 0.24
ITGA3-214ENST00000514834 USP6NLQ92738 828 aa16.56■□□□□ 0.24
ITGA3-214ENST00000514834 RILPL2Q969X0 211 aa16.56■□□□□ 0.24
ITGA3-214ENST00000514834 RNF208Q9H0X6 261 aa16.56■□□□□ 0.24
ITGA3-214ENST00000514834 NAPBQ9H115 298 aa16.56■□□□□ 0.24
ITGA3-214ENST00000514834 OSBPL3Q9H4L5 887 aa16.56■□□□□ 0.24
ITGA3-214ENST00000514834 FBXO28Q9NVF7 368 aa16.56■□□□□ 0.24
ITGA3-214ENST00000514834 MAPK4P31152 587 aa16.55■□□□□ 0.24
ITGA3-214ENST00000514834 PPARAQ07869 468 aa16.55■□□□□ 0.24
ITGA3-214ENST00000514834 FAM47AQ5JRC9 791 aa16.55■□□□□ 0.24
ITGA3-214ENST00000514834 MORN1Q5T089 497 aa16.55■□□□□ 0.24
ITGA3-214ENST00000514834 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
ITGA3-214ENST00000514834 GTF3C2Q8WUA4 911 aaPredicted RBP16.55■□□□□ 0.24
ITGA3-214ENST00000514834 TRIB2Q92519 343 aa16.55■□□□□ 0.24
ITGA3-214ENST00000514834 ATG4CQ96DT6 458 aa16.55■□□□□ 0.24
ITGA3-214ENST00000514834 NUP88Q99567 741 aaPredicted RBP16.55■□□□□ 0.24
ITGA3-214ENST00000514834 NACAP1Q9BZK3 213 aa16.55■□□□□ 0.24
ITGA3-214ENST00000514834 HELLSQ9NRZ9 838 aa16.55■□□□□ 0.24
ITGA3-214ENST00000514834 MYH4Q9Y623 1939 aa16.55■□□□□ 0.24
ITGA3-214ENST00000514834 A0A0G2JMZ2 1700 aa16.54■□□□□ 0.24
ITGA3-214ENST00000514834 GJB1P08034 283 aa16.54■□□□□ 0.24
ITGA3-214ENST00000514834 DSG3P32926 999 aa16.54■□□□□ 0.24
ITGA3-214ENST00000514834 UBXN2AP68543 259 aa16.54■□□□□ 0.24
ITGA3-214ENST00000514834 CCL14Q16627 93 aa16.54■□□□□ 0.24
ITGA3-214ENST00000514834 PLEKHH3Q7Z736 793 aa16.54■□□□□ 0.24
ITGA3-214ENST00000514834 LPAR1Q92633 364 aa16.54■□□□□ 0.24
ITGA3-214ENST00000514834 CEP95Q96GE4 821 aa16.54■□□□□ 0.24
ITGA3-214ENST00000514834 CLIP2Q9UDT6 1046 aa16.54■□□□□ 0.24
ITGA3-214ENST00000514834 COL11A1P12107 1806 aaPredicted RBP16.54■□□□□ 0.24
ITGA3-214ENST00000514834 RAD21O60216 631 aa16.53■□□□□ 0.24
ITGA3-214ENST00000514834 FLOT1O75955 427 aa16.53■□□□□ 0.24
ITGA3-214ENST00000514834 SDSP20132 328 aa16.53■□□□□ 0.24
ITGA3-214ENST00000514834 MCMDC2Q4G0Z9 681 aa16.53■□□□□ 0.24
ITGA3-214ENST00000514834 FAM83BQ5T0W9 1011 aa16.53■□□□□ 0.24
ITGA3-214ENST00000514834 WDR78Q5VTH9 848 aa16.53■□□□□ 0.24
ITGA3-214ENST00000514834 CCAR1Q8IX12 1150 aaKnown RBP16.53■□□□□ 0.24
ITGA3-214ENST00000514834 ZNF444Q8N0Y2 327 aaPredicted RBP16.53■□□□□ 0.24
ITGA3-214ENST00000514834 NUDT12Q9BQG2 462 aa16.53■□□□□ 0.24
ITGA3-214ENST00000514834 MOV10L1Q9BXT6 1211 aaKnown RBP16.53■□□□□ 0.24
ITGA3-214ENST00000514834 SH2D4AQ9H788 454 aa16.53■□□□□ 0.24
ITGA3-214ENST00000514834 HOXC10Q9NYD6 342 aa16.53■□□□□ 0.24
ITGA3-214ENST00000514834 NYAP2Q9P242 653 aa16.53■□□□□ 0.24
ITGA3-214ENST00000514834 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.53■□□□□ 0.24
ITGA3-214ENST00000514834 F5H6K3 240 aa16.52■□□□□ 0.24
ITGA3-214ENST00000514834 WDR46O15213 610 aaKnown RBP16.52■□□□□ 0.24
ITGA3-214ENST00000514834 FGAP02671 866 aa16.52■□□□□ 0.24
ITGA3-214ENST00000514834 GJA8P48165 433 aa16.52■□□□□ 0.24
ITGA3-214ENST00000514834 TFAP4Q01664 338 aa16.52■□□□□ 0.24
ITGA3-214ENST00000514834 KLRC3Q07444 240 aa16.52■□□□□ 0.24
ITGA3-214ENST00000514834 NEDD1Q8NHV4 660 aa16.52■□□□□ 0.24
ITGA3-214ENST00000514834 NKX2-3Q8TAU0 364 aa16.52■□□□□ 0.24
ITGA3-214ENST00000514834 U2AF1L4Q8WU68 220 aaKnown RBP16.52■□□□□ 0.24
ITGA3-214ENST00000514834 DEFB118Q96PH6 123 aa16.52■□□□□ 0.24
ITGA3-214ENST00000514834 MTMR4Q9NYA4 1195 aa16.52■□□□□ 0.24
ITGA3-214ENST00000514834 NMT2O60551 498 aa16.51■□□□□ 0.23
ITGA3-214ENST00000514834 NDUFB10O96000 172 aa16.51■□□□□ 0.23
ITGA3-214ENST00000514834 HMGCRP04035 888 aa16.51■□□□□ 0.23
ITGA3-214ENST00000514834 HSPD1P10809 573 aaKnown RBP16.51■□□□□ 0.23
ITGA3-214ENST00000514834 PTPREP23469 700 aa16.51■□□□□ 0.23
ITGA3-214ENST00000514834 TMEM132BQ14DG7 1078 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms