RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 MCM4P33991 863 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 INHBCP55103 352 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 INO80DQ53TQ3 878 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-208ENST00000514335 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.16□□□□□ -1.1
NIPBL-208ENST00000514335 SPATA17Q96L03 361 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 FNBP1Q96RU3 617 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 RUFY1Q96T51 708 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 CNNM2Q9H8M5 875 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 MCM8Q9UJA3 840 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 CROTQ9UKG9 612 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 MRPS23Q9Y3D9 190 aaKnown RBP8.16□□□□□ -1.1
NIPBL-208ENST00000514335 PXDNQ92626 1479 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 PRMT3O60678 531 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 ZNF254O75437 659 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 PDGFRBP09619 1106 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 SLC16A2P36021 539 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 SEPT7Q16181 437 aaKnown RBP8.16□□□□□ -1.1
NIPBL-208ENST00000514335 CNGA3Q16281 694 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 ESX1Q8N693 406 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 SH3GLB2Q9NR46 395 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-208ENST00000514335 PFDN2Q9UHV9 154 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 MKL2Q9ULH7 1088 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 WDR37Q9Y2I8 494 aa8.16□□□□□ -1.1
NIPBL-208ENST00000514335 TRPM3Q9HCF6 1732 aaPredicted RBP8.15□□□□□ -1.1
NIPBL-208ENST00000514335 CGNL1Q0VF96 1302 aa8.15□□□□□ -1.1
NIPBL-208ENST00000514335 PSMA3P25788 255 aa8.15□□□□□ -1.1
NIPBL-208ENST00000514335 SCNN1DP51172 638 aa8.15□□□□□ -1.1
NIPBL-208ENST00000514335 HNRNPUQ00839 825 aaKnown RBP eCLIP8.15□□□□□ -1.1
NIPBL-208ENST00000514335 ACAP1Q15027 740 aa8.15□□□□□ -1.1
NIPBL-208ENST00000514335 CWC27Q6UX04 472 aaKnown RBP8.15□□□□□ -1.1
NIPBL-208ENST00000514335 CKAP2LQ8IYA6 745 aa8.15□□□□□ -1.1
NIPBL-208ENST00000514335 MAELQ96JY0 434 aaKnown RBP8.15□□□□□ -1.1
NIPBL-208ENST00000514335 NACAP1Q9BZK3 213 aa8.15□□□□□ -1.1
NIPBL-208ENST00000514335 SNX5Q9Y5X3 404 aa8.15□□□□□ -1.1
NIPBL-208ENST00000514335 EIF3AQ14152 1382 aaKnown RBP8.15□□□□□ -1.1
NIPBL-208ENST00000514335 KIAA1210Q9ULL0 1709 aa8.15□□□□□ -1.11
NIPBL-208ENST00000514335 EIF3CLB5ME19 914 aaKnown RBP8.15□□□□□ -1.11
NIPBL-208ENST00000514335 CTIFO43310 598 aaKnown RBP8.15□□□□□ -1.11
NIPBL-208ENST00000514335 STAM2O75886 525 aa8.15□□□□□ -1.11
NIPBL-208ENST00000514335 FUT4P22083 530 aa8.15□□□□□ -1.11
NIPBL-208ENST00000514335 KIF5BP33176 963 aa8.15□□□□□ -1.11
NIPBL-208ENST00000514335 NCBP1Q09161 790 aaKnown RBP8.15□□□□□ -1.11
NIPBL-208ENST00000514335 ARHGAP22Q7Z5H3 698 aa8.15□□□□□ -1.11
NIPBL-208ENST00000514335 MIPOL1Q8TD10 442 aa8.15□□□□□ -1.11
NIPBL-208ENST00000514335 NEK1Q96PY6 1258 aa8.15□□□□□ -1.11
NIPBL-208ENST00000514335 EIF3CQ99613 913 aaKnown RBP8.15□□□□□ -1.11
NIPBL-208ENST00000514335 JPH2Q9BR39 696 aaPredicted RBP8.15□□□□□ -1.11
NIPBL-208ENST00000514335 ALG1Q9BT22 464 aa8.15□□□□□ -1.11
NIPBL-208ENST00000514335 ZNF510Q9Y2H8 683 aa8.15□□□□□ -1.11
NIPBL-208ENST00000514335 ALS2Q96Q42 1657 aa8.15□□□□□ -1.11
NIPBL-208ENST00000514335 CCDC144AA2RUR9 1427 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 TMEM221A6NGB7 291 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 CYP27B1O15528 508 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 KCNJ13O60928 360 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 NCAM1P13591 858 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 TCF7P36402 384 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-208ENST00000514335 PAPOLAP51003 745 aaKnown RBP8.14□□□□□ -1.11
NIPBL-208ENST00000514335 ARPC4P59998 168 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 GPS2Q13227 327 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 GRM1Q13255 1194 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 PABPC4Q13310 644 aaKnown RBP eCLIP8.14□□□□□ -1.113e-6■■■□□ 17.5
NIPBL-208ENST00000514335 RAPGEF1Q13905 1077 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 CRY1Q16526 586 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 ZNF804AQ7Z570 1209 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 IQCA1Q86XH1 822 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 MGARPQ8TDB4 240 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 EPSTI1Q96J88 318 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 SLKQ9H2G2 1235 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-208ENST00000514335 PRKRIP1Q9H875 184 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-208ENST00000514335 PRKAG2Q9UGJ0 569 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 NRXN1Q9ULB1 1477 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 PARP4Q9UKK3 1724 aaKnown RBP8.14□□□□□ -1.11
NIPBL-208ENST00000514335 KIF2AO00139 706 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-208ENST00000514335 KLHL41O60662 606 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 VIMP08670 466 aaKnown RBP8.14□□□□□ -1.11
NIPBL-208ENST00000514335 HSPA8P11142 646 aaKnown RBP8.14□□□□□ -1.11
NIPBL-208ENST00000514335 MCM2P49736 904 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 NEK2P51955 445 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 TAF7Q15545 349 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-208ENST00000514335 SH2D4BQ5SQS7 431 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 DAAM2Q86T65 1068 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 WDR63Q8IWG1 891 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 NDFIP2Q9NV92 336 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 TUBGCP4Q9UGJ1 667 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 NOSIPQ9Y314 301 aaKnown RBP8.14□□□□□ -1.11
NIPBL-208ENST00000514335 CASZ1Q86V15 1759 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 GLI3P10071 1580 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 KIF15Q9NS87 1388 aa8.14□□□□□ -1.11
NIPBL-208ENST00000514335 KDM1AO60341 852 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 CYP4A11Q02928 519 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 THEMIS2Q5TEJ8 643 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 FAM173BQ6P4H8 233 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 SLC15A3Q8IY34 581 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 RNF25Q96BH1 459 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-208ENST00000514335 HPS4Q9NQG7 708 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 ZNF330Q9Y3S2 320 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-208ENST00000514335 ERC2O15083 957 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 ATP9BO43861 1147 aa8.13□□□□□ -1.11
NIPBL-208ENST00000514335 CEP104O60308 925 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms