RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 PLCD1P51178 756 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 UBXN2AP68543 259 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 GABPAQ06546 454 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 SMC5Q8IY18 1101 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 NKX2-3Q8TAU0 364 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 RNF25Q96BH1 459 aaPredicted RBP11.86□□□□□ -0.51
CCL28-203ENST00000513525 COA7Q96BR5 231 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 EDC3Q96F86 508 aaKnown RBP11.86□□□□□ -0.51
CCL28-203ENST00000513525 HAUS7Q99871 368 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 ADCY3O60266 1144 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 MYCP01106 439 aaPredicted RBP11.86□□□□□ -0.51
CCL28-203ENST00000513525 GJB1P08034 283 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 CCL5P13501 91 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 SHMT1P34896 483 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 IRX3P78415 501 aaPredicted RBP11.86□□□□□ -0.51
CCL28-203ENST00000513525 CERKLQ49MI3 558 aaPredicted RBP11.86□□□□□ -0.51
CCL28-203ENST00000513525 SKAP1Q86WV1 359 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 LCORLQ8N3X6 602 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 SHISA4Q96DD7 197 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 C12orf42Q96LP6 360 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.86□□□□□ -0.51
CCL28-203ENST00000513525 BOLA2Q9H3K6 86 aa11.86□□□□□ -0.51
CCL28-203ENST00000513525 DCP1AQ9NPI6 582 aaPredicted RBP11.86□□□□□ -0.51
CCL28-203ENST00000513525 POLR3DP05423 398 aaPredicted RBP11.85□□□□□ -0.51
CCL28-203ENST00000513525 CAPN2P17655 700 aa11.85□□□□□ -0.51
CCL28-203ENST00000513525 GJA8P48165 433 aa11.85□□□□□ -0.51
CCL28-203ENST00000513525 HERVK_113P62684 666 aa11.85□□□□□ -0.51
CCL28-203ENST00000513525 ABCB5Q2M3G0 1257 aa11.85□□□□□ -0.51
CCL28-203ENST00000513525 USP17L2Q6R6M4 530 aa11.85□□□□□ -0.51
CCL28-203ENST00000513525 GTF3C2Q8WUA4 911 aaPredicted RBP11.85□□□□□ -0.51
CCL28-203ENST00000513525 EMILIN3Q9NT22 766 aa11.85□□□□□ -0.51
CCL28-203ENST00000513525 ZNF236Q9UL36 1845 aa11.85□□□□□ -0.51
CCL28-203ENST00000513525 USP14P54578 494 aa11.84□□□□□ -0.51
CCL28-203ENST00000513525 UBE3CQ15386 1083 aa11.84□□□□□ -0.51
CCL28-203ENST00000513525 C8orf34Q49A92 452 aa11.84□□□□□ -0.51
CCL28-203ENST00000513525 SDR42E1Q8WUS8 393 aa11.84□□□□□ -0.51
CCL28-203ENST00000513525 P2RX7Q99572 595 aaKnown RBP11.84□□□□□ -0.51
CCL28-203ENST00000513525 KIAA1683Q9H0B3 1180 aa11.84□□□□□ -0.51
CCL28-203ENST00000513525 RNF208Q9H0X6 261 aa11.84□□□□□ -0.51
CCL28-203ENST00000513525 DCTPP1Q9H773 170 aa11.84□□□□□ -0.51
CCL28-203ENST00000513525 CABP5Q9NP86 173 aa11.84□□□□□ -0.51
CCL28-203ENST00000513525 ATP8A2Q9NTI2 1148 aa11.84□□□□□ -0.51
CCL28-203ENST00000513525 MCM9Q9NXL9 1143 aa11.84□□□□□ -0.51
CCL28-203ENST00000513525 BIN2Q9UBW5 565 aaPredicted RBP11.84□□□□□ -0.51
CCL28-203ENST00000513525 LHX6Q9UPM6 363 aa11.84□□□□□ -0.51
CCL28-203ENST00000513525 PLXNA1Q9UIW2 1896 aa11.83□□□□□ -0.52
CCL28-203ENST00000513525 SMARCA5O60264 1052 aaPredicted RBP11.83□□□□□ -0.52
CCL28-203ENST00000513525 INHAP05111 366 aa11.83□□□□□ -0.52
CCL28-203ENST00000513525 ELNP15502 786 aa11.83□□□□□ -0.52
CCL28-203ENST00000513525 UBE2Q1Q7Z7E8 422 aa11.83□□□□□ -0.52
CCL28-203ENST00000513525 GCC1Q96CN9 775 aa11.83□□□□□ -0.52
CCL28-203ENST00000513525 BCL11AQ9H165 835 aa11.83□□□□□ -0.52
CCL28-203ENST00000513525 ARMT1Q9H993 441 aa11.83□□□□□ -0.52
CCL28-203ENST00000513525 SWAP70Q9UH65 585 aa11.83□□□□□ -0.52
CCL28-203ENST00000513525 GJD2Q9UKL4 321 aa11.83□□□□□ -0.52
CCL28-203ENST00000513525 USP17L15C9J2P7 530 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 USP17L13C9JLJ4 530 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 USP17L11C9JVI0 530 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 USP17L18D6R9N7 530 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 USP17L22D6RA61 530 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 USP17L17D6RBQ6 530 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 USP17L19D6RCP7 530 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 USP17L20D6RJB6 530 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 MBD4O95243 580 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 GUCY1A2P33402 732 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 USP17L24Q0WX57 530 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 RAB3GAP1Q15042 981 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 ZSCAN25Q6NSZ9 544 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 FBXO22Q8NEZ5 403 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 GPRC5AQ8NFJ5 357 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 U2AF1L4Q8WU68 220 aaKnown RBP11.82□□□□□ -0.52
CCL28-203ENST00000513525 FEZ1Q99689 392 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 UNC93B1Q9H1C4 597 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 TXNRD2Q9NNW7 524 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 ECHDC1Q9NTX5 307 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 RBPJLQ9UBG7 517 aa11.82□□□□□ -0.52
CCL28-203ENST00000513525 C2orf72A6NCS6 295 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 SGPL1O95470 568 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 HMGCRP04035 888 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 ERVK-9P63128 1117 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 ERVK-24P63145 666 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 SLFNL1Q499Z3 407 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 LBX2Q6XYB7 198 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 CATSPERGQ6ZRH7 1159 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 ACER1Q8TDN7 264 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 IPO9Q96P70 1041 aaKnown RBP11.81□□□□□ -0.52
CCL28-203ENST00000513525 PAK6Q9NQU5 681 aaPredicted RBP11.81□□□□□ -0.52
CCL28-203ENST00000513525 PCDHGA4Q9Y5G9 962 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 PRKAB2O43741 272 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 VCAM1P19320 739 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 MAPK4P31152 587 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 NUCB1Q02818 461 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 SEPT2Q15019 361 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 ZYXQ15942 572 aaKnown RBP11.81□□□□□ -0.52
CCL28-203ENST00000513525 C12orf60Q5U649 245 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 POTEEQ6S8J3 1075 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 TMEM179Q6ZVK1 233 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 SOCS4Q8WXH5 440 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 GPATCH3Q96I76 525 aa11.81□□□□□ -0.52
CCL28-203ENST00000513525 RABGAP1Q9Y3P9 1069 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms