RNA–Protein interactions for RNA: ENST00000513462.1

NIFKP2-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 2, humanhuman

BASIC

Gene NIFKP2, Length 856 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP2-201ENST00000513462 TMEM47Q9BQJ4 181 aa12.16□□□□□ -0.46
NIFKP2-201ENST00000513462 RNF26Q9BY78 433 aaPredicted RBP12.16□□□□□ -0.46
NIFKP2-201ENST00000513462 CNOT7Q9UIV1 285 aaKnown RBP12.16□□□□□ -0.46
NIFKP2-201ENST00000513462 GJA3Q9Y6H8 435 aa12.16□□□□□ -0.46
NIFKP2-201ENST00000513462 CNTNAP1P78357 1384 aa12.16□□□□□ -0.46
NIFKP2-201ENST00000513462 MYH15Q9Y2K3 1946 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 ZNF541Q9H0D2 1346 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 CLRN2A0PK11 232 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 PRPF3O43395 683 aaKnown RBP12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 TBC1D12O60347 775 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 DEXIO95424 95 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 AKR1B1P15121 316 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 TNNI2P48788 182 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 GNAQP50148 359 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 MCTP1Q6DN14 999 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 CDC37L1Q7L3B6 337 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 NBPF11Q86T75 865 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 FBXO18Q8NFZ0 1043 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 CEP95Q96GE4 821 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 C8orf76Q96K31 380 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 CSRNP1Q96S65 589 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 SLC26A6Q9BXS9 759 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 DNAJC18Q9H819 358 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 MTMR4Q9NYA4 1195 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 STX8Q9UNK0 236 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 TCHHQ07283 1943 aa12.15□□□□□ -0.46
NIFKP2-201ENST00000513462 H7C1D1 291 aa12.14□□□□□ -0.47
NIFKP2-201ENST00000513462 TTLL1O95922 423 aa12.14□□□□□ -0.47
NIFKP2-201ENST00000513462 FUT2Q10981 343 aa12.14□□□□□ -0.47
NIFKP2-201ENST00000513462 TNFAIP1Q13829 316 aa12.14□□□□□ -0.47
NIFKP2-201ENST00000513462 GRM4Q14833 912 aa12.14□□□□□ -0.47
NIFKP2-201ENST00000513462 NBPF9Q3BBW0 867 aa12.14□□□□□ -0.47
NIFKP2-201ENST00000513462 CERKLQ49MI3 558 aaPredicted RBP12.14□□□□□ -0.47
NIFKP2-201ENST00000513462 TMTC3Q6ZXV5 915 aa12.14□□□□□ -0.47
NIFKP2-201ENST00000513462 MICALL2Q8IY33 904 aa12.14□□□□□ -0.47
NIFKP2-201ENST00000513462 PHKBQ93100 1093 aa12.14□□□□□ -0.47
NIFKP2-201ENST00000513462 LZTS2Q9BRK4 669 aa12.14□□□□□ -0.47
NIFKP2-201ENST00000513462 ALG1Q9BT22 464 aa12.14□□□□□ -0.47
NIFKP2-201ENST00000513462 VEZTQ9HBM0 779 aa12.14□□□□□ -0.47
NIFKP2-201ENST00000513462 RBM27Q9P2N5 1060 aaKnown RBP12.14□□□□□ -0.47
NIFKP2-201ENST00000513462 MYH4Q9Y623 1939 aa12.13□□□□□ -0.47
NIFKP2-201ENST00000513462 YBX3P16989 372 aaKnown RBP eCLIP12.13□□□□□ -0.47
NIFKP2-201ENST00000513462 SMARCA1P28370 1054 aa12.13□□□□□ -0.47
NIFKP2-201ENST00000513462 AKAP17AQ02040 695 aaKnown RBP12.13□□□□□ -0.47
NIFKP2-201ENST00000513462 RESTQ13127 1097 aa12.13□□□□□ -0.47
NIFKP2-201ENST00000513462 TRIM29Q14134 588 aa12.13□□□□□ -0.47
NIFKP2-201ENST00000513462 CSPP1Q1MSJ5 1256 aa12.13□□□□□ -0.47
NIFKP2-201ENST00000513462 SKOR2Q2VWA4 1001 aaPredicted RBP12.13□□□□□ -0.47
NIFKP2-201ENST00000513462 EFCAB3Q8N7B9 438 aa12.13□□□□□ -0.47
NIFKP2-201ENST00000513462 KANSL2Q9H9L4 492 aa12.13□□□□□ -0.47
NIFKP2-201ENST00000513462 RYDENQ9NUL5 291 aaKnown RBP12.13□□□□□ -0.47
NIFKP2-201ENST00000513462 PGAP2Q9UHJ9 254 aa12.13□□□□□ -0.47
NIFKP2-201ENST00000513462 SHTN1A0MZ66 631 aa12.12□□□□□ -0.47
NIFKP2-201ENST00000513462 PALM3A6NDB9 673 aaPredicted RBP12.12□□□□□ -0.47
NIFKP2-201ENST00000513462 MPHOSPH10O00566 681 aaKnown RBP12.12□□□□□ -0.47
NIFKP2-201ENST00000513462 MAP3K10Q02779 954 aa12.12□□□□□ -0.47
NIFKP2-201ENST00000513462 ABCB5Q2M3G0 1257 aa12.12□□□□□ -0.47
NIFKP2-201ENST00000513462 KIF4BQ2VIQ3 1234 aa12.12□□□□□ -0.47
NIFKP2-201ENST00000513462 RBM26Q5T8P6 1007 aaKnown RBP12.12□□□□□ -0.47
NIFKP2-201ENST00000513462 ATL3Q6DD88 541 aa12.12□□□□□ -0.47
NIFKP2-201ENST00000513462 TMEM179Q6ZVK1 233 aa12.12□□□□□ -0.47
NIFKP2-201ENST00000513462 TMEM87AQ8NBN3 555 aa12.12□□□□□ -0.47
NIFKP2-201ENST00000513462 MKL1Q969V6 931 aa12.12□□□□□ -0.47
NIFKP2-201ENST00000513462 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.12□□□□□ -0.47
NIFKP2-201ENST00000513462 GPRC5DQ9NZD1 345 aa12.12□□□□□ -0.47
NIFKP2-201ENST00000513462 NYAP2Q9P242 653 aa12.12□□□□□ -0.47
NIFKP2-201ENST00000513462 MAD2L2Q9UI95 211 aa12.12□□□□□ -0.47
NIFKP2-201ENST00000513462 TRAK2O60296 914 aa12.11□□□□□ -0.47
NIFKP2-201ENST00000513462 PPFIA3O75145 1194 aa12.11□□□□□ -0.47
NIFKP2-201ENST00000513462 PLEKHA8P1O95397 391 aa12.11□□□□□ -0.47
NIFKP2-201ENST00000513462 PARP1P09874 1014 aaKnown RBP12.11□□□□□ -0.47
NIFKP2-201ENST00000513462 XBP1P17861 261 aa12.11□□□□□ -0.47
NIFKP2-201ENST00000513462 KRT85P78386 507 aa12.11□□□□□ -0.47
NIFKP2-201ENST00000513462 SAMD7Q7Z3H4 446 aa12.11□□□□□ -0.47
NIFKP2-201ENST00000513462 BRAPQ7Z569 592 aa12.11□□□□□ -0.47
NIFKP2-201ENST00000513462 FERMT3Q86UX7 667 aa12.11□□□□□ -0.47
NIFKP2-201ENST00000513462 SRBD1Q8N5C6 995 aaKnown RBP12.11□□□□□ -0.47
NIFKP2-201ENST00000513462 CABP5Q9NP86 173 aa12.11□□□□□ -0.47
NIFKP2-201ENST00000513462 LMBRD1Q9NUN5 540 aa12.11□□□□□ -0.47
NIFKP2-201ENST00000513462 RNF181Q9P0P0 153 aa12.11□□□□□ -0.47
NIFKP2-201ENST00000513462 CLIP2Q9UDT6 1046 aa12.11□□□□□ -0.47
NIFKP2-201ENST00000513462 CNTNAP5Q8WYK1 1306 aa12.11□□□□□ -0.47
NIFKP2-201ENST00000513462 FAM196BA6NMK8 535 aa12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 PRPF40AO75400 957 aaKnown RBP12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 EGFRP00533 1210 aa12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 SNHG28P0DPA3 235 aa12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 GUCY1B3Q02153 619 aa12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 DNM1Q05193 864 aaKnown RBP12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 RASA3Q14644 834 aa12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 PKN1Q16512 942 aa12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 TBC1D10BQ4KMP7 808 aaPredicted RBP12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 IER5LQ5T953 404 aa12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 KRT40Q6A162 431 aa12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 APOBEC3FQ8IUX4 373 aaKnown RBP12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 FAM177A1Q8N128 213 aaPredicted RBP12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 CMTR1Q8N1G2 835 aaKnown RBP12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 CCDC82Q8N4S0 544 aa12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 SLC39A7Q92504 469 aa12.1□□□□□ -0.47
NIFKP2-201ENST00000513462 ZNF396Q96N95 335 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms