RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 GOLIM4O00461 696 aa15.17■□□□□ 0.02
VEGFA-216ENST00000512683 ATP5JP18859 108 aa15.17■□□□□ 0.02
VEGFA-216ENST00000512683 C20orf194Q5TEA3 1177 aa15.17■□□□□ 0.02
VEGFA-216ENST00000512683 WDR78Q5VTH9 848 aa15.17■□□□□ 0.02
VEGFA-216ENST00000512683 DDRGK1Q96HY6 314 aa15.17■□□□□ 0.02
VEGFA-216ENST00000512683 UBE2OQ9C0C9 1292 aaKnown RBP15.17■□□□□ 0.02
VEGFA-216ENST00000512683 ARHGEF10LQ9HCE6 1279 aa15.17■□□□□ 0.02
VEGFA-216ENST00000512683 NDUFB9Q9Y6M9 179 aa15.17■□□□□ 0.02
VEGFA-216ENST00000512683 SZT2Q5T011 3432 aa15.17■□□□□ 0.02
VEGFA-216ENST00000512683 A0A1W2PRG0 241 aa15.16■□□□□ 0.02
VEGFA-216ENST00000512683 DNM1LO00429 736 aa15.16■□□□□ 0.02
VEGFA-216ENST00000512683 MPHOSPH10O00566 681 aaKnown RBP15.16■□□□□ 0.02
VEGFA-216ENST00000512683 SOX1O00570 391 aaPredicted RBP15.16■□□□□ 0.02
VEGFA-216ENST00000512683 SLC25A27O95847 323 aa15.16■□□□□ 0.02
VEGFA-216ENST00000512683 DSG3P32926 999 aa15.16■□□□□ 0.02
VEGFA-216ENST00000512683 UBE3CQ15386 1083 aa15.16■□□□□ 0.02
VEGFA-216ENST00000512683 ZSCAN25Q6NSZ9 544 aa15.16■□□□□ 0.02
VEGFA-216ENST00000512683 SLC17A8Q8NDX2 589 aa15.16■□□□□ 0.02
VEGFA-216ENST00000512683 MOV10L1Q9BXT6 1211 aaKnown RBP15.16■□□□□ 0.02
VEGFA-216ENST00000512683 SPATC1LQ9H0A9 340 aa15.16■□□□□ 0.02
VEGFA-216ENST00000512683 NRBP1Q9UHY1 535 aa15.16■□□□□ 0.02
VEGFA-216ENST00000512683 SYN1P17600 705 aa15.15■□□□□ 0.02
VEGFA-216ENST00000512683 ADD2P35612 726 aa15.15■□□□□ 0.02
VEGFA-216ENST00000512683 LRRC26Q2I0M4 334 aa15.15■□□□□ 0.02
VEGFA-216ENST00000512683 LRCH3Q96II8 777 aa15.15■□□□□ 0.02
VEGFA-216ENST00000512683 SENP6Q9GZR1 1112 aaPredicted RBP15.15■□□□□ 0.02
VEGFA-216ENST00000512683 KANSL2Q9H9L4 492 aa15.15■□□□□ 0.02
VEGFA-216ENST00000512683 PAG1Q9NWQ8 432 aa15.15■□□□□ 0.02
VEGFA-216ENST00000512683 FLRT1Q9NZU1 646 aa15.15■□□□□ 0.02
VEGFA-216ENST00000512683 DOCK3Q8IZD9 2030 aa15.14■□□□□ 0.01
VEGFA-216ENST00000512683 WDR46O15213 610 aaKnown RBP15.14■□□□□ 0.01
VEGFA-216ENST00000512683 ADORA2AP29274 412 aa15.14■□□□□ 0.01
VEGFA-216ENST00000512683 CNGA1P29973 690 aa15.14■□□□□ 0.01
VEGFA-216ENST00000512683 COPB2P35606 906 aa15.14■□□□□ 0.01
VEGFA-216ENST00000512683 C12orf60Q5U649 245 aa15.14■□□□□ 0.01
VEGFA-216ENST00000512683 FAM109BQ6ICB4 259 aaPredicted RBP15.14■□□□□ 0.01
VEGFA-216ENST00000512683 LCORLQ8N3X6 602 aa15.14■□□□□ 0.01
VEGFA-216ENST00000512683 NPLOC4Q8TAT6 608 aa15.14■□□□□ 0.01
VEGFA-216ENST00000512683 SDR42E1Q8WUS8 393 aa15.14■□□□□ 0.01
VEGFA-216ENST00000512683 DNAJC2Q99543 621 aaKnown RBP15.14■□□□□ 0.01
VEGFA-216ENST00000512683 HAUS7Q99871 368 aa15.14■□□□□ 0.01
VEGFA-216ENST00000512683 LBHD1Q9BQE6 289 aaPredicted RBP15.14■□□□□ 0.01
VEGFA-216ENST00000512683 TANGO6Q9C0B7 1094 aa15.14■□□□□ 0.01
VEGFA-216ENST00000512683 VCPKMTQ9H867 229 aa15.14■□□□□ 0.01
VEGFA-216ENST00000512683 ADAMTS5Q9UNA0 930 aa15.14■□□□□ 0.01
VEGFA-216ENST00000512683 SEPT4O43236 478 aa15.13■□□□□ 0.01
VEGFA-216ENST00000512683 CYBAP13498 195 aa15.13■□□□□ 0.01
VEGFA-216ENST00000512683 ERCC3P19447 782 aa15.13■□□□□ 0.01
VEGFA-216ENST00000512683 CYP2C19P33261 490 aa15.13■□□□□ 0.01
VEGFA-216ENST00000512683 SIAH1Q8IUQ4 282 aa15.13■□□□□ 0.01
VEGFA-216ENST00000512683 DEFB123Q8N688 67 aa15.13■□□□□ 0.01
VEGFA-216ENST00000512683 PRKAG2Q9UGJ0 569 aa15.13■□□□□ 0.01
VEGFA-216ENST00000512683 STXBP5LQ9Y2K9 1186 aa15.13■□□□□ 0.01
VEGFA-216ENST00000512683 DIS3Q9Y2L1 958 aaKnown RBP15.13■□□□□ 0.01
VEGFA-216ENST00000512683 FLOT1O75955 427 aa15.12■□□□□ 0.01
VEGFA-216ENST00000512683 FCER1AP12319 257 aa15.12■□□□□ 0.01
VEGFA-216ENST00000512683 CDK8P49336 464 aa15.12■□□□□ 0.01
VEGFA-216ENST00000512683 ICA1Q05084 483 aa15.12■□□□□ 0.01
VEGFA-216ENST00000512683 C1orf53Q5VUE5 145 aa15.12■□□□□ 0.01
VEGFA-216ENST00000512683 GIMAP6Q6P9H5 292 aa15.12■□□□□ 0.01
VEGFA-216ENST00000512683 C16orf86Q6ZW13 317 aa15.12■□□□□ 0.01
VEGFA-216ENST00000512683 BOLA2Q9H3K6 86 aa15.12■□□□□ 0.01
VEGFA-216ENST00000512683 ARMT1Q9H993 441 aa15.12■□□□□ 0.01
VEGFA-216ENST00000512683 MYH7P12883 1935 aa15.11■□□□□ 0.01
VEGFA-216ENST00000512683 USP17L12C9JPN9 530 aa15.11■□□□□ 0.01
VEGFA-216ENST00000512683 USP17L21D6R901 530 aa15.11■□□□□ 0.01
VEGFA-216ENST00000512683 APBB1O00213 710 aa15.11■□□□□ 0.01
VEGFA-216ENST00000512683 MBD4O95243 580 aa15.11■□□□□ 0.01
VEGFA-216ENST00000512683 TRPV1Q8NER1 839 aa15.11■□□□□ 0.01
VEGFA-216ENST00000512683 MTMR10Q9NXD2 777 aa15.11■□□□□ 0.01
VEGFA-216ENST00000512683 LAMA3Q16787 3333 aa15.11■□□□□ 0.01
VEGFA-216ENST00000512683 KBTBD13C9JR72 458 aa15.1■□□□□ 0.01
VEGFA-216ENST00000512683 COBLO75128 1261 aa15.1■□□□□ 0.01
VEGFA-216ENST00000512683 AKR1B1P15121 316 aa15.1■□□□□ 0.01
VEGFA-216ENST00000512683 SBK1Q52WX2 424 aa15.1■□□□□ 0.01
VEGFA-216ENST00000512683 SLC39A5Q6ZMH5 540 aa15.1■□□□□ 0.01
VEGFA-216ENST00000512683 NCAPG2Q86XI2 1143 aa15.1■□□□□ 0.01
VEGFA-216ENST00000512683 RIOX2Q8IUF8 465 aa15.1■□□□□ 0.01
VEGFA-216ENST00000512683 MSL3Q8N5Y2 521 aaKnown RBP15.1■□□□□ 0.01
VEGFA-216ENST00000512683 LRRCC1Q9C099 1032 aa15.1■□□□□ 0.01
VEGFA-216ENST00000512683 DDX60LQ5H9U9 1706 aaKnown RBP15.09■□□□□ 0.01
VEGFA-216ENST00000512683 POTEB2H3BUK9 544 aa15.09■□□□□ 0.01
VEGFA-216ENST00000512683 PRKAB2O43741 272 aa15.09■□□□□ 0.01
VEGFA-216ENST00000512683 CYP2D6P10635 497 aa15.09■□□□□ 0.01
VEGFA-216ENST00000512683 PLS1Q14651 629 aa15.09■□□□□ 0.01
VEGFA-216ENST00000512683 SNX17Q15036 470 aa15.09■□□□□ 0.01
VEGFA-216ENST00000512683 SLC44A5Q8NCS7 719 aa15.09■□□□□ 0.01
VEGFA-216ENST00000512683 DYNLL2Q96FJ2 89 aa15.09■□□□□ 0.01
VEGFA-216ENST00000512683 MAML3Q96JK9 1138 aa15.09■□□□□ 0.01
VEGFA-216ENST00000512683 ZNF287Q9HBT7 754 aa15.09■□□□□ 0.01
VEGFA-216ENST00000512683 GOPCQ9HD26 462 aa15.09■□□□□ 0.01
VEGFA-216ENST00000512683 ARPP21Q9UBL0 812 aaPredicted RBP15.09■□□□□ 0.01
VEGFA-216ENST00000512683 SLC4A4Q9Y6R1 1079 aa15.09■□□□□ 0.01
VEGFA-216ENST00000512683 NAV1Q8NEY1 1877 aa15.08■□□□□ 0.01
VEGFA-216ENST00000512683 DLL1O00548 723 aa15.08■□□□□ 0
VEGFA-216ENST00000512683 EEF2P13639 858 aaKnown RBP15.08■□□□□ 0
VEGFA-216ENST00000512683 STAT3P40763 770 aa15.08■□□□□ 0
VEGFA-216ENST00000512683 RTP1P59025 263 aa15.08■□□□□ 0
VEGFA-216ENST00000512683 MDM2Q00987 491 aaPredicted RBP15.08■□□□□ 0
VEGFA-216ENST00000512683 KCTD2Q14681 263 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms