RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 TRAF5O00463 557 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 RSAD2Q8WXG1 361 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 DHX58Q96C10 678 aa9.84□□□□□ -0.83
VCAN-208ENST00000512590 CDV3Q9UKY7 258 aaKnown RBP9.84□□□□□ -0.83
VCAN-208ENST00000512590 ECE1P42892 770 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 FOXD4Q12950 439 aaPredicted RBP9.83□□□□□ -0.84
VCAN-208ENST00000512590 TBC1D22AQ8WUA7 517 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 C16orf45Q96MC5 204 aaPredicted RBP9.83□□□□□ -0.84
VCAN-208ENST00000512590 STN1Q9H668 368 aaKnown RBP9.83□□□□□ -0.84
VCAN-208ENST00000512590 EVA1BQ9NVM1 165 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 FANCD2Q9BXW9 1451 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 MOCS3O95396 460 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 IVLP07476 585 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 TBC1D19Q8N5T2 526 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 JPH2Q9BR39 696 aaPredicted RBP9.83□□□□□ -0.84
VCAN-208ENST00000512590 SELENONQ9NZV5 590 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 GRXCR2A6NFK2 248 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 H0YCG3 227 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 EXOC3O60645 756 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 SMIM24O75264 130 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 ST8SIA6P61647 398 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 GTF2IP78347 998 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 INTS8Q75QN2 995 aaKnown RBP9.83□□□□□ -0.84
VCAN-208ENST00000512590 ZSCAN18Q8TBC5 510 aaPredicted RBP9.83□□□□□ -0.84
VCAN-208ENST00000512590 PBXIP1Q96AQ6 731 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 THUMPD2Q9BTF0 503 aaKnown RBP9.83□□□□□ -0.84
VCAN-208ENST00000512590 WASLO00401 505 aaPredicted RBP9.83□□□□□ -0.84
VCAN-208ENST00000512590 SMARCA5O60264 1052 aaPredicted RBP9.83□□□□□ -0.84
VCAN-208ENST00000512590 CCNT1O60563 726 aaKnown RBP9.83□□□□□ -0.84
VCAN-208ENST00000512590 ATP2B4P23634 1241 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 BCAMP50895 628 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 NEDD9Q14511 834 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 BTBD8Q5XKL5 378 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 NME9Q86XW9 330 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 UBL4BQ8N7F7 174 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 SNX19Q92543 992 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 VCX3AQ9NNX9 186 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 MRPL11Q9Y3B7 192 aaKnown RBP9.83□□□□□ -0.84
VCAN-208ENST00000512590 IQCA1LA6NCM1 817 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 TRIM75PA6NK02 468 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 PHBP35232 272 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 SLC39A6Q13433 755 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 DOK7Q18PE1 504 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 DCAF4L1Q3SXM0 396 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 TEX12Q9BXU0 123 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 SAMD15Q9P1V8 674 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 VPS8Q8N3P4 1428 aa9.83□□□□□ -0.84
VCAN-208ENST00000512590 SYKP43405 635 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 ADCY7P51828 1080 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 XKR9Q5GH70 373 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 FAM180AQ6UWF9 173 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 CACNA2D3Q8IZS8 1091 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 NLGN1Q8N2Q7 840 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 ENOX1Q8TC92 643 aaKnown RBP9.82□□□□□ -0.84
VCAN-208ENST00000512590 DNM3Q9UQ16 869 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 GAS7O60861 476 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 IL15P40933 162 aaPredicted RBP9.82□□□□□ -0.84
VCAN-208ENST00000512590 HADHQ16836 314 aaKnown RBP9.82□□□□□ -0.84
VCAN-208ENST00000512590 C6orf203Q9P0P8 240 aaPredicted RBP9.82□□□□□ -0.84
VCAN-208ENST00000512590 IGFBP4P22692 258 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 DEUP1Q05D60 604 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 NFX1Q12986 1120 aaKnown RBP9.82□□□□□ -0.84
VCAN-208ENST00000512590 VEPH1Q14D04 833 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 LRRC43Q8N309 656 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 SRPRBQ9Y5M8 271 aaKnown RBP9.82□□□□□ -0.84
VCAN-208ENST00000512590 TOP2AP11388 1531 aaKnown RBP9.82□□□□□ -0.84
VCAN-208ENST00000512590 LRRIQ4A6NIV6 560 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 CCDC122Q5T0U0 273 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 FAM196AQ6ZSG2 479 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 RABEP2Q9H5N1 569 aa9.82□□□□□ -0.84
VCAN-208ENST00000512590 GSTA4O15217 222 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 COPS6Q7L5N1 327 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 CHMP1BQ7LBR1 199 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 C19orf44Q9H6X5 657 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 ECHDC1Q9NTX5 307 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 F6X3S4 739 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 TRAK2O60296 914 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 ASMTLO95671 621 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 SFSWAPQ12872 951 aaKnown RBP9.81□□□□□ -0.84
VCAN-208ENST00000512590 STX1AQ16623 288 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 KRT27Q7Z3Y8 459 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 KIF18AQ8NI77 898 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 DDX27Q96GQ7 796 aaKnown RBP9.81□□□□□ -0.84
VCAN-208ENST00000512590 ZFP42Q96MM3 310 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 HPCAL4Q9UM19 191 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 PLEKHH2Q8IVE3 1493 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 ALDH1A1P00352 501 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 MFSD4BQ5TF39 518 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 TTBK2Q6IQ55 1244 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 TPH2Q8IWU9 490 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 CCDC42Q96M95 316 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 SPON1Q9HCB6 807 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 RPRD1BQ9NQG5 326 aaKnown RBP9.81□□□□□ -0.84
VCAN-208ENST00000512590 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.81□□□□□ -0.84
VCAN-208ENST00000512590 CAMSAP2Q08AD1 1489 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 PRMT3O60678 531 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 GCNT3O95395 438 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 F13A1P00488 732 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 POLR2MP0CAP2 368 aa9.81□□□□□ -0.84
VCAN-208ENST00000512590 RASGRF1Q13972 1273 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms