RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 CRACR2BQ8N4Y2 399 aaPredicted RBP15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 KCNG4Q8TDN1 519 aa15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 ANP32BQ92688 251 aaKnown RBP15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 LRCH3Q96II8 777 aa15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 ZKSCAN3Q9BRR0 538 aa15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 MRIQ9BWK5 157 aa15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 SLC26A6Q9BXS9 759 aa15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 TAOK2Q9UL54 1235 aa15.18■□□□□ 0.02
DEPDC1B-206ENST00000512452 USP17L8P0C7I0 530 aa15.17■□□□□ 0.02
DEPDC1B-206ENST00000512452 U2AF2P26368 475 aaKnown RBP eCLIP15.17■□□□□ 0.02
DEPDC1B-206ENST00000512452 RHBDL3P58872 404 aa15.17■□□□□ 0.02
DEPDC1B-206ENST00000512452 GTF2IP78347 998 aa15.17■□□□□ 0.02
DEPDC1B-206ENST00000512452 GUCY1B3Q02153 619 aa15.17■□□□□ 0.02
DEPDC1B-206ENST00000512452 SAFBQ15424 915 aaKnown RBP eCLIP15.17■□□□□ 0.02
DEPDC1B-206ENST00000512452 MYSM1Q5VVJ2 828 aa15.17■□□□□ 0.02
DEPDC1B-206ENST00000512452 NBPF11Q86T75 865 aa15.17■□□□□ 0.02
DEPDC1B-206ENST00000512452 TEX11Q8IYF3 940 aa15.17■□□□□ 0.02
DEPDC1B-206ENST00000512452 SUPT20HQ8NEM7 779 aa15.17■□□□□ 0.02
DEPDC1B-206ENST00000512452 FAM122AQ96E09 287 aa15.17■□□□□ 0.02
DEPDC1B-206ENST00000512452 USP28Q96RU2 1077 aa15.17■□□□□ 0.02
DEPDC1B-206ENST00000512452 PSMD1Q99460 953 aa15.17■□□□□ 0.02
DEPDC1B-206ENST00000512452 MYL10Q9BUA6 226 aa15.17■□□□□ 0.02
DEPDC1B-206ENST00000512452 A0A1W2PQ27 194 aa15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 A0A1W2PQ64 194 aa15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 A0A1W2PQD8 194 aa15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 TSPY2A6NKD2 308 aa15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 PRPF3O43395 683 aaKnown RBP15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 POLR3DP05423 398 aaPredicted RBP15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 XBP1P17861 261 aa15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 RXRAP19793 462 aa15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 FOSBP53539 338 aa15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 HIRAP54198 1017 aaPredicted RBP15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 HDLBPQ00341 1268 aaKnown RBP15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 AKAP17AQ02040 695 aaKnown RBP15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 TROAPQ12815 778 aa15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 HHIPL2Q6UWX4 724 aa15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 TGFBRAP1Q8WUH2 860 aa15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 PHKBQ93100 1093 aa15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 TMEM106CQ9BVX2 250 aa15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 NUP62CLQ9H1M0 184 aa15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 PRO3102Q9H379 93 aa15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 COL4A5P29400 1685 aa15.16■□□□□ 0.02
DEPDC1B-206ENST00000512452 FOCADQ5VW36 1801 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 ECM29Q5VYK3 1845 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 G3V3G9 751 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 CTAGE5O15320 804 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 CYP2D6P10635 497 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 KIF5BP33176 963 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 UVSSAQ2YD98 709 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 DCAF8Q5TAQ9 597 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 RBM43Q6ZSC3 357 aaKnown RBP15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 C16orf86Q6ZW13 317 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 CCDC144CPQ8IYA2 1237 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 FAM177A1Q8N128 213 aaPredicted RBP15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 LARGE2Q8N3Y3 721 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 CTCFLQ8NI51 663 aaPredicted RBP15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 BICD2Q8TD16 824 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 NUP133Q8WUM0 1156 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 PGBD1Q96JS3 809 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 RBSNQ9H1K0 784 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 FOXP1Q9H334 677 aaPredicted RBP15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 DAGLAQ9Y4D2 1042 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 TRIM17Q9Y577 477 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 FLT1P17948 1338 aa15.15■□□□□ 0.02
DEPDC1B-206ENST00000512452 RIMBP2O15034 1052 aa15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 PRDM1O75626 825 aa15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 GNAQP50148 359 aa15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 CCDC173Q0VFZ6 552 aa15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 FUT2Q10981 343 aa15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 MAP3K11Q16584 847 aa15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 ADALQ6DHV7 355 aa15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 TMTC3Q6ZXV5 915 aa15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 ZNF444Q8N0Y2 327 aaPredicted RBP15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 STK11IPQ8N1F8 1099 aa15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 LINC00301Q8NCQ3 95 aa15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 CLSTN2Q9H4D0 955 aa15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 MKNK2Q9HBH9 465 aa15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 RAPGEFL1Q9UHV5 662 aa15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 MORC2Q9Y6X9 1032 aaPredicted RBP15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 CDK5RAP2Q96SN8 1893 aa15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 MYO3BQ8WXR4 1341 aa15.14■□□□□ 0.01
DEPDC1B-206ENST00000512452 SMIM22K7EJ46 135 aa15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 MMP1P03956 469 aa15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 LIG1P18858 919 aa15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 TFAP4Q01664 338 aa15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 GNL2Q13823 731 aaKnown RBP15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 STK38Q15208 465 aa15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 STRIP1Q5VSL9 837 aa15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 ANO1Q5XXA6 986 aa15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 OTUD7BQ6GQQ9 843 aa15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 RCSD1Q6JBY9 416 aa15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 CCDC73Q6ZRK6 1079 aa15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 RASAL3Q86YV0 1011 aa15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 SNED1Q8TER0 1413 aa15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 PPP1R9BQ96SB3 815 aa15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 FUCA2Q9BTY2 467 aa15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.13■□□□□ 0.01
DEPDC1B-206ENST00000512452 PLIN4Q96Q06 1357 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 KIF28PB7ZC32 967 aa15.12■□□□□ 0.01
DEPDC1B-206ENST00000512452 SPTLC2O15270 562 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms