RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 GINM1Q9NU53 330 aa17.58■□□□□ 0.41
SCLT1-209ENST00000511426 CNOT7Q9UIV1 285 aaKnown RBP17.58■□□□□ 0.41
SCLT1-209ENST00000511426 hCG_1984214I3L0E3 225 aa17.58■□□□□ 0.4
SCLT1-209ENST00000511426 SCG2P13521 617 aa17.58■□□□□ 0.4
SCLT1-209ENST00000511426 PKN1Q16512 942 aa17.58■□□□□ 0.4
SCLT1-209ENST00000511426 PFKFB3Q16875 520 aaPredicted RBP17.58■□□□□ 0.4
SCLT1-209ENST00000511426 ABCB5Q2M3G0 1257 aa17.58■□□□□ 0.4
SCLT1-209ENST00000511426 RBM26Q5T8P6 1007 aaKnown RBP17.58■□□□□ 0.4
SCLT1-209ENST00000511426 ZNF713Q8N859 430 aaPredicted RBP17.58■□□□□ 0.4
SCLT1-209ENST00000511426 HOOK2Q96ED9 719 aa17.58■□□□□ 0.4
SCLT1-209ENST00000511426 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.58■□□□□ 0.4
SCLT1-209ENST00000511426 VEZTQ9HBM0 779 aa17.58■□□□□ 0.4
SCLT1-209ENST00000511426 MPHOSPH10O00566 681 aaKnown RBP17.57■□□□□ 0.4
SCLT1-209ENST00000511426 FIBPO43427 364 aa17.57■□□□□ 0.4
SCLT1-209ENST00000511426 PDHBP11177 359 aa17.57■□□□□ 0.4
SCLT1-209ENST00000511426 GNL2Q13823 731 aaKnown RBP17.57■□□□□ 0.4
SCLT1-209ENST00000511426 SYAP1Q96A49 352 aaPredicted RBP17.57■□□□□ 0.4
SCLT1-209ENST00000511426 SPATA32Q96LK8 384 aa17.57■□□□□ 0.4
SCLT1-209ENST00000511426 GJA3Q9Y6H8 435 aa17.57■□□□□ 0.4
SCLT1-209ENST00000511426 V9GY48 417 aaPredicted RBP17.57■□□□□ 0.4
SCLT1-209ENST00000511426 ZNF541Q9H0D2 1346 aa17.56■□□□□ 0.4
SCLT1-209ENST00000511426 ZC3H4Q9UPT8 1303 aaKnown RBP17.56■□□□□ 0.4
SCLT1-209ENST00000511426 YEATS4O95619 227 aa17.56■□□□□ 0.4
SCLT1-209ENST00000511426 CALML3P27482 149 aa17.56■□□□□ 0.4
SCLT1-209ENST00000511426 GUCY1B3Q02153 619 aa17.56■□□□□ 0.4
SCLT1-209ENST00000511426 KIF4BQ2VIQ3 1234 aa17.56■□□□□ 0.4
SCLT1-209ENST00000511426 NBPF9Q3BBW0 867 aa17.56■□□□□ 0.4
SCLT1-209ENST00000511426 MYSM1Q5VVJ2 828 aa17.56■□□□□ 0.4
SCLT1-209ENST00000511426 GALNT17Q6IS24 598 aa17.56■□□□□ 0.4
SCLT1-209ENST00000511426 POLR3EQ9NVU0 708 aa17.56■□□□□ 0.4
SCLT1-209ENST00000511426 PPP2R3BQ9Y5P8 575 aa17.56■□□□□ 0.4
SCLT1-209ENST00000511426 KLRF2D3W0D1 207 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 PPFIA3O75145 1194 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 GUCY1A2P33402 732 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 ICA1Q05084 483 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 FOXD4L6Q3SYB3 417 aaPredicted RBP17.55■□□□□ 0.4
SCLT1-209ENST00000511426 FOXD4L3Q6VB84 417 aaPredicted RBP17.55■□□□□ 0.4
SCLT1-209ENST00000511426 APOBEC3FQ8IUX4 373 aaKnown RBP17.55■□□□□ 0.4
SCLT1-209ENST00000511426 CCDC82Q8N4S0 544 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 GMCL1P1Q8NEA9 526 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 CCDC148Q8NFR7 591 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 LEO1Q8WVC0 666 aaPredicted RBP17.55■□□□□ 0.4
SCLT1-209ENST00000511426 AIFM3Q96NN9 605 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 PHF20Q9BVI0 1012 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 RTEL1Q9NZ71 1219 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 GPRC5DQ9NZD1 345 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 CLIP2Q9UDT6 1046 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 PGAP2Q9UHJ9 254 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 RCOR1Q9UKL0 485 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 ISY1Q9ULR0 285 aaKnown RBP17.55■□□□□ 0.4
SCLT1-209ENST00000511426 ILDR2Q71H61 639 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 CCDC12Q8WUD4 166 aaPredicted RBP17.55■□□□□ 0.4
SCLT1-209ENST00000511426 DCAF4Q8WV16 495 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 MYH15Q9Y2K3 1946 aa17.55■□□□□ 0.4
SCLT1-209ENST00000511426 NASPP49321 788 aaPredicted RBP17.54■□□□□ 0.4
SCLT1-209ENST00000511426 FOSBP53539 338 aa17.54■□□□□ 0.4
SCLT1-209ENST00000511426 RILPL1Q5EBL4 403 aa17.54■□□□□ 0.4
SCLT1-209ENST00000511426 NOSTRINQ8IVI9 506 aa17.54■□□□□ 0.4
SCLT1-209ENST00000511426 DIS3L2Q8IYB7 885 aaKnown RBP17.54■□□□□ 0.4
SCLT1-209ENST00000511426 CMTR1Q8N1G2 835 aaKnown RBP17.54■□□□□ 0.4
SCLT1-209ENST00000511426 STAG2Q8N3U4 1231 aa17.54■□□□□ 0.4
SCLT1-209ENST00000511426 KCNG4Q8TDN1 519 aa17.54■□□□□ 0.4
SCLT1-209ENST00000511426 RIOX1Q9H6W3 641 aa17.54■□□□□ 0.4
SCLT1-209ENST00000511426 MORC2Q9Y6X9 1032 aaPredicted RBP17.54■□□□□ 0.4
SCLT1-209ENST00000511426 KRT2P35908 639 aa17.53■□□□□ 0.4
SCLT1-209ENST00000511426 ZNF543Q08ER8 600 aa17.53■□□□□ 0.4
SCLT1-209ENST00000511426 RASA3Q14644 834 aa17.53■□□□□ 0.4
SCLT1-209ENST00000511426 OTUD7BQ6GQQ9 843 aa17.53■□□□□ 0.4
SCLT1-209ENST00000511426 CHAMP1Q96JM3 812 aa17.53■□□□□ 0.4
SCLT1-209ENST00000511426 SH2D4AQ9H788 454 aa17.53■□□□□ 0.4
SCLT1-209ENST00000511426 GDPD2Q9HCC8 539 aa17.53■□□□□ 0.4
SCLT1-209ENST00000511426 PITPNM2Q9BZ72 1349 aa17.53■□□□□ 0.4
SCLT1-209ENST00000511426 SBF1O95248 1867 aa17.53■□□□□ 0.4
SCLT1-209ENST00000511426 GOLGA6L4A6NEF3 574 aa17.52■□□□□ 0.4
SCLT1-209ENST00000511426 GSE1Q14687 1217 aa17.52■□□□□ 0.4
SCLT1-209ENST00000511426 FAM173BQ6P4H8 233 aa17.52■□□□□ 0.4
SCLT1-209ENST00000511426 LRRC47Q8N1G4 583 aaKnown RBP17.52■□□□□ 0.4
SCLT1-209ENST00000511426 GPT2Q8TD30 523 aa17.52■□□□□ 0.4
SCLT1-209ENST00000511426 RRP36Q96EU6 259 aaKnown RBP17.52■□□□□ 0.4
SCLT1-209ENST00000511426 GMCL1Q96IK5 515 aa17.52■□□□□ 0.4
SCLT1-209ENST00000511426 USP28Q96RU2 1077 aa17.52■□□□□ 0.4
SCLT1-209ENST00000511426 TMEM39BQ9GZU3 492 aa17.52■□□□□ 0.4
SCLT1-209ENST00000511426 ARHGEF10LQ9HCE6 1279 aa17.52■□□□□ 0.4
SCLT1-209ENST00000511426 SEC63Q9UGP8 760 aaKnown RBP17.52■□□□□ 0.4
SCLT1-209ENST00000511426 KIF28PB7ZC32 967 aa17.52■□□□□ 0.39
SCLT1-209ENST00000511426 ASNSP08243 561 aa17.52■□□□□ 0.39
SCLT1-209ENST00000511426 EEF2P13639 858 aaKnown RBP17.52■□□□□ 0.39
SCLT1-209ENST00000511426 USP17L2Q6R6M4 530 aa17.52■□□□□ 0.39
SCLT1-209ENST00000511426 JMYQ8N9B5 988 aa17.52■□□□□ 0.39
SCLT1-209ENST00000511426 DAGLBQ8NCG7 672 aa17.52■□□□□ 0.39
SCLT1-209ENST00000511426 GJB4Q9NTQ9 266 aa17.52■□□□□ 0.39
SCLT1-209ENST00000511426 BARHL2Q9NY43 387 aa17.52■□□□□ 0.39
SCLT1-209ENST00000511426 MYH6P13533 1939 aa17.51■□□□□ 0.39
SCLT1-209ENST00000511426 FAM196BA6NMK8 535 aa17.51■□□□□ 0.39
SCLT1-209ENST00000511426 CYTH3O43739 400 aa17.51■□□□□ 0.39
SCLT1-209ENST00000511426 GH2P01242 217 aa17.51■□□□□ 0.39
SCLT1-209ENST00000511426 CAP2P40123 477 aa17.51■□□□□ 0.39
SCLT1-209ENST00000511426 SEPT2Q15019 361 aa17.51■□□□□ 0.39
SCLT1-209ENST00000511426 DCAF15Q66K64 600 aa17.51■□□□□ 0.39
SCLT1-209ENST00000511426 TEPSINQ96N21 525 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms