RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 ARFGAP3Q9NP61 516 aa12.78□□□□□ -0.36
COPS4-206ENST00000509093 ZCCHC17Q9NP64 241 aaKnown RBP12.78□□□□□ -0.36
COPS4-206ENST00000509093 MKRN1Q9UHC7 482 aaKnown RBP12.78□□□□□ -0.36
COPS4-206ENST00000509093 ACTN2P35609 894 aa12.78□□□□□ -0.36
COPS4-206ENST00000509093 PPP4CP60510 307 aa12.78□□□□□ -0.36
COPS4-206ENST00000509093 TEX2Q8IWB9 1127 aa12.78□□□□□ -0.36
COPS4-206ENST00000509093 TTLL6Q8N841 843 aa12.78□□□□□ -0.36
COPS4-206ENST00000509093 NSUN7Q8NE18 718 aaKnown RBP12.78□□□□□ -0.36
COPS4-206ENST00000509093 TGFBRAP1Q8WUH2 860 aa12.78□□□□□ -0.36
COPS4-206ENST00000509093 ZNF274Q96GC6 653 aaPredicted RBP12.78□□□□□ -0.36
COPS4-206ENST00000509093 WDR19Q8NEZ3 1342 aa12.78□□□□□ -0.36
COPS4-206ENST00000509093 MYH2Q9UKX2 1941 aa12.77□□□□□ -0.36
COPS4-206ENST00000509093 GPR75-ASB3A0A0A6YYF3 556 aa12.77□□□□□ -0.36
COPS4-206ENST00000509093 IVLP07476 585 aa12.77□□□□□ -0.36
COPS4-206ENST00000509093 LDHCP07864 332 aa12.77□□□□□ -0.36
COPS4-206ENST00000509093 RXRAP19793 462 aa12.77□□□□□ -0.36
COPS4-206ENST00000509093 USP5P45974 858 aa12.77□□□□□ -0.36
COPS4-206ENST00000509093 SCNN1DP51172 638 aa12.77□□□□□ -0.36
COPS4-206ENST00000509093 NOM1Q5C9Z4 860 aaKnown RBP12.77□□□□□ -0.36
COPS4-206ENST00000509093 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.36
COPS4-206ENST00000509093 FCHSD1Q86WN1 690 aa12.77□□□□□ -0.36
COPS4-206ENST00000509093 FSIP1Q8NA03 581 aa12.77□□□□□ -0.36
COPS4-206ENST00000509093 UPF1Q92900 1129 aaKnown RBP eCLIP12.77□□□□□ -0.36
COPS4-206ENST00000509093 CCDC34Q96HJ3 373 aa12.77□□□□□ -0.36
COPS4-206ENST00000509093 LY9Q9HBG7 655 aa12.77□□□□□ -0.36
COPS4-206ENST00000509093 BRMS1Q9HCU9 246 aa12.77□□□□□ -0.36
COPS4-206ENST00000509093 ATP8A2Q9NTI2 1148 aa12.77□□□□□ -0.36
COPS4-206ENST00000509093 MCM9Q9NXL9 1143 aa12.77□□□□□ -0.36
COPS4-206ENST00000509093 ANGEL1Q9UNK9 670 aaKnown RBP12.77□□□□□ -0.36
COPS4-206ENST00000509093 GOLGA8BA8MQT2 603 aa12.77□□□□□ -0.37
COPS4-206ENST00000509093 FANCGO15287 622 aa12.77□□□□□ -0.37
COPS4-206ENST00000509093 ECE2O60344 883 aa12.77□□□□□ -0.37
COPS4-206ENST00000509093 LMAN1P49257 510 aa12.77□□□□□ -0.37
COPS4-206ENST00000509093 GTF2A1P52655 376 aaPredicted RBP12.77□□□□□ -0.37
COPS4-206ENST00000509093 CEBPZQ03701 1054 aaKnown RBP12.77□□□□□ -0.37
COPS4-206ENST00000509093 TMEM67Q5HYA8 995 aa12.77□□□□□ -0.37
COPS4-206ENST00000509093 TMED8Q6PL24 325 aaPredicted RBP12.77□□□□□ -0.37
COPS4-206ENST00000509093 MAPKAPK5Q8IW41 473 aa12.77□□□□□ -0.37
COPS4-206ENST00000509093 ZNF396Q96N95 335 aaPredicted RBP12.77□□□□□ -0.37
COPS4-206ENST00000509093 MYL10Q9BUA6 226 aa12.77□□□□□ -0.37
COPS4-206ENST00000509093 FUT8Q9BYC5 575 aa12.77□□□□□ -0.37
COPS4-206ENST00000509093 KRT23Q9C075 422 aa12.77□□□□□ -0.37
COPS4-206ENST00000509093 CNNM2Q9H8M5 875 aa12.77□□□□□ -0.37
COPS4-206ENST00000509093 ADAM21Q9UKJ8 722 aa12.77□□□□□ -0.37
COPS4-206ENST00000509093 DAGLAQ9Y4D2 1042 aa12.77□□□□□ -0.37
COPS4-206ENST00000509093 KIAA1551Q9HCM1 1747 aa12.76□□□□□ -0.37
COPS4-206ENST00000509093 IFIT3O14879 490 aaKnown RBP12.76□□□□□ -0.37
COPS4-206ENST00000509093 BAG3O95817 575 aa12.76□□□□□ -0.37
COPS4-206ENST00000509093 RHBDL3P58872 404 aa12.76□□□□□ -0.37
COPS4-206ENST00000509093 JAKMIP3Q5VZ66 844 aa12.76□□□□□ -0.37
COPS4-206ENST00000509093 SAP30BPQ9UHR5 308 aaKnown RBP12.76□□□□□ -0.37
COPS4-206ENST00000509093 TTF2Q9UNY4 1162 aaKnown RBP12.76□□□□□ -0.37
COPS4-206ENST00000509093 GAKO14976 1311 aa12.76□□□□□ -0.37
COPS4-206ENST00000509093 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.76□□□□□ -0.37
COPS4-206ENST00000509093 PTPDC1A2A3K4 754 aa12.76□□□□□ -0.37
COPS4-206ENST00000509093 FOSBP53539 338 aa12.76□□□□□ -0.37
COPS4-206ENST00000509093 RSRC2Q7L4I2 434 aaKnown RBP12.76□□□□□ -0.37
COPS4-206ENST00000509093 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
COPS4-206ENST00000509093 DYNLL2Q96FJ2 89 aa12.76□□□□□ -0.37
COPS4-206ENST00000509093 FAM163AQ96GL9 167 aaPredicted RBP12.76□□□□□ -0.37
COPS4-206ENST00000509093 RNF41Q9H4P4 317 aaPredicted RBP12.76□□□□□ -0.37
COPS4-206ENST00000509093 PCDHAC2Q9Y5I4 1007 aa12.76□□□□□ -0.37
COPS4-206ENST00000509093 ZSCAN12O43309 604 aa12.75□□□□□ -0.37
COPS4-206ENST00000509093 CHRM1P11229 460 aaPredicted RBP12.75□□□□□ -0.37
COPS4-206ENST00000509093 ZRSR1Q15695 479 aaKnown RBP12.75□□□□□ -0.37
COPS4-206ENST00000509093 DPCR1Q3MIW9 517 aa12.75□□□□□ -0.37
COPS4-206ENST00000509093 SBK1Q52WX2 424 aa12.75□□□□□ -0.37
COPS4-206ENST00000509093 LEKR1Q6ZMV7 388 aa12.75□□□□□ -0.37
COPS4-206ENST00000509093 PODNQ7Z5L7 613 aa12.75□□□□□ -0.37
COPS4-206ENST00000509093 FMR1NBQ8N0W7 255 aaPredicted RBP12.75□□□□□ -0.37
COPS4-206ENST00000509093 MRPS27Q92552 414 aaKnown RBP12.75□□□□□ -0.37
COPS4-206ENST00000509093 RABGGTAQ92696 567 aa12.75□□□□□ -0.37
COPS4-206ENST00000509093 TMEM87BQ96K49 555 aa12.75□□□□□ -0.37
COPS4-206ENST00000509093 USP28Q96RU2 1077 aa12.75□□□□□ -0.37
COPS4-206ENST00000509093 LLPHQ9BRT6 129 aaKnown RBP12.75□□□□□ -0.37
COPS4-206ENST00000509093 FTOQ9C0B1 505 aaKnown RBP eCLIP12.75□□□□□ -0.37
COPS4-206ENST00000509093 MTFR1LQ9H019 292 aa12.75□□□□□ -0.37
COPS4-206ENST00000509093 PPP1R1BQ9UD71 204 aaPredicted RBP12.75□□□□□ -0.37
COPS4-206ENST00000509093 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.75□□□□□ -0.37
COPS4-206ENST00000509093 SCN9AQ15858 1988 aa12.75□□□□□ -0.37
COPS4-206ENST00000509093 YDJCA8MPS7 323 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 RPS6KA5O75582 802 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 FGRP09769 529 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 PPP2R3AQ06190 1150 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 FAM47AQ5JRC9 791 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 APOA5Q6Q788 366 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 NFXL1Q6ZNB6 911 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 TEX11Q8IYF3 940 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 TMX1Q9H3N1 280 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 ARPP21Q9UBL0 812 aaPredicted RBP12.74□□□□□ -0.37
COPS4-206ENST00000509093 DLEC1Q9Y238 1755 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 H3BQF6 201 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 PPIP5K2O43314 1243 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 RANBP6O60518 1105 aaKnown RBP12.74□□□□□ -0.37
COPS4-206ENST00000509093 FDPSP14324 419 aaKnown RBP12.74□□□□□ -0.37
COPS4-206ENST00000509093 CDC27P30260 824 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 PLCD1P51178 756 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 GYS2P54840 703 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 MAP3K9P80192 1104 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 DACT2Q5SW24 774 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms