RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 MRPS5P82675 430 aaKnown RBP17.02■□□□□ 0.32
DDR1-260ENST00000507533 AKNAD1Q5T1N1 836 aa17.02■□□□□ 0.32
DDR1-260ENST00000507533 DIEXFQ68CQ4 756 aaKnown RBP17.02■□□□□ 0.32
DDR1-260ENST00000507533 FAM9BQ8IZU0 186 aa17.02■□□□□ 0.32
DDR1-260ENST00000507533 XPNPEP3Q9NQH7 507 aa17.02■□□□□ 0.32
DDR1-260ENST00000507533 DYNLL1P63167 89 aaKnown RBP17.01■□□□□ 0.31
DDR1-260ENST00000507533 COG2Q14746 738 aa17.01■□□□□ 0.31
DDR1-260ENST00000507533 ABCB5Q2M3G0 1257 aa17.01■□□□□ 0.31
DDR1-260ENST00000507533 CERKLQ49MI3 558 aaPredicted RBP17.01■□□□□ 0.31
DDR1-260ENST00000507533 SHCBP1Q8NEM2 672 aa17.01■□□□□ 0.31
DDR1-260ENST00000507533 SPATC1LQ9H0A9 340 aa17.01■□□□□ 0.31
DDR1-260ENST00000507533 PRDM12Q9H4Q4 367 aa17.01■□□□□ 0.31
DDR1-260ENST00000507533 HOXC10Q9NYD6 342 aa17.01■□□□□ 0.31
DDR1-260ENST00000507533 RARBP10826 455 aa17■□□□□ 0.31
DDR1-260ENST00000507533 CCDC129Q6ZRS4 1044 aa17■□□□□ 0.31
DDR1-260ENST00000507533 RNF180Q86T96 592 aa17■□□□□ 0.31
DDR1-260ENST00000507533 IL27Q8NEV9 243 aa17■□□□□ 0.31
DDR1-260ENST00000507533 MAML3Q96JK9 1138 aa17■□□□□ 0.31
DDR1-260ENST00000507533 CABP5Q9NP86 173 aa17■□□□□ 0.31
DDR1-260ENST00000507533 SERPINB13Q9UIV8 391 aa17■□□□□ 0.31
DDR1-260ENST00000507533 NOB1Q9ULX3 412 aaKnown RBP17■□□□□ 0.31
DDR1-260ENST00000507533 A0A1W2PQ45 241 aaPredicted RBP16.99■□□□□ 0.31
DDR1-260ENST00000507533 A0A1W2PQY0 241 aa16.99■□□□□ 0.31
DDR1-260ENST00000507533 E9PSI1 815 aa16.99■□□□□ 0.31
DDR1-260ENST00000507533 PGK1P00558 417 aa16.99■□□□□ 0.31
DDR1-260ENST00000507533 CYP2E1P05181 493 aaPredicted RBP16.99■□□□□ 0.31
DDR1-260ENST00000507533 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
DDR1-260ENST00000507533 PBX2P40425 430 aa16.99■□□□□ 0.31
DDR1-260ENST00000507533 FAAP100Q0VG06 881 aa16.99■□□□□ 0.31
DDR1-260ENST00000507533 CCDC85BQ15834 202 aaPredicted RBP16.99■□□□□ 0.31
DDR1-260ENST00000507533 TTC39AQ5SRH9 613 aa16.99■□□□□ 0.31
DDR1-260ENST00000507533 SLC44A5Q8NCS7 719 aa16.99■□□□□ 0.31
DDR1-260ENST00000507533 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.99■□□□□ 0.319e-7■■■□□ 17.6
DDR1-260ENST00000507533 PBX4Q9BYU1 374 aa16.99■□□□□ 0.31
DDR1-260ENST00000507533 MROH8Q9H579 483 aa16.99■□□□□ 0.31
DDR1-260ENST00000507533 DCDC2CA8MYV0 355 aa16.98■□□□□ 0.31
DDR1-260ENST00000507533 USP5P45974 858 aa16.98■□□□□ 0.31
DDR1-260ENST00000507533 G3BP1Q13283 466 aaKnown RBP eCLIP16.98■□□□□ 0.31
DDR1-260ENST00000507533 MTX1Q13505 466 aa16.98■□□□□ 0.31
DDR1-260ENST00000507533 PLS1Q14651 629 aa16.98■□□□□ 0.31
DDR1-260ENST00000507533 NCAPG2Q86XI2 1143 aa16.98■□□□□ 0.31
DDR1-260ENST00000507533 ABRAQ8N0Z2 381 aa16.98■□□□□ 0.31
DDR1-260ENST00000507533 TOX2Q96NM4 488 aa16.98■□□□□ 0.31
DDR1-260ENST00000507533 API5Q9BZZ5 524 aaKnown RBP16.98■□□□□ 0.31
DDR1-260ENST00000507533 TANGO6Q9C0B7 1094 aa16.98■□□□□ 0.31
DDR1-260ENST00000507533 EHD4Q9H223 541 aa16.98■□□□□ 0.31
DDR1-260ENST00000507533 GRXCR1A8MXD5 290 aa16.97■□□□□ 0.31
DDR1-260ENST00000507533 TIMP1P01033 207 aa16.97■□□□□ 0.31
DDR1-260ENST00000507533 CYP7A1P22680 504 aa16.97■□□□□ 0.31
DDR1-260ENST00000507533 ADGRE1Q14246 886 aa16.97■□□□□ 0.31
DDR1-260ENST00000507533 ANKRD33Q7Z3H0 272 aa16.97■□□□□ 0.31
DDR1-260ENST00000507533 TTC6Q86TZ1 520 aa16.97■□□□□ 0.31
DDR1-260ENST00000507533 NRBP1Q9UHY1 535 aa16.97■□□□□ 0.31
DDR1-260ENST00000507533 ZNF236Q9UL36 1845 aa16.96■□□□□ 0.31
DDR1-260ENST00000507533 GNAI3P08754 354 aa16.96■□□□□ 0.31
DDR1-260ENST00000507533 FCER1AP12319 257 aa16.96■□□□□ 0.31
DDR1-260ENST00000507533 IGFBP4P22692 258 aa16.96■□□□□ 0.31
DDR1-260ENST00000507533 GUCY1A2P33402 732 aa16.96■□□□□ 0.31
DDR1-260ENST00000507533 SEPT2Q15019 361 aa16.96■□□□□ 0.31
DDR1-260ENST00000507533 CCDC158Q5M9N0 1113 aa16.96■□□□□ 0.31
DDR1-260ENST00000507533 MB21D1Q8N884 522 aa16.96■□□□□ 0.31
DDR1-260ENST00000507533 C1QTNF1Q9BXJ1 281 aa16.96■□□□□ 0.31
DDR1-260ENST00000507533 PIH1D3Q9NQM4 214 aaKnown RBP16.96■□□□□ 0.31
DDR1-260ENST00000507533 BDP1A6H8Y1 2624 aa16.95■□□□□ 0.3
DDR1-260ENST00000507533 A0A1W2PRG0 241 aa16.95■□□□□ 0.3
DDR1-260ENST00000507533 IGSF3O75054 1194 aa16.95■□□□□ 0.3
DDR1-260ENST00000507533 DSG3P32926 999 aa16.95■□□□□ 0.3
DDR1-260ENST00000507533 SHMT1P34896 483 aa16.95■□□□□ 0.3
DDR1-260ENST00000507533 ZAP70P43403 619 aa16.95■□□□□ 0.3
DDR1-260ENST00000507533 PPIGQ13427 754 aaKnown RBP eCLIP16.95■□□□□ 0.36e-8■□□□□ 10.3
DDR1-260ENST00000507533 TMEM240Q5SV17 173 aa16.95■□□□□ 0.3
DDR1-260ENST00000507533 MFSD5Q6N075 450 aa16.95■□□□□ 0.3
DDR1-260ENST00000507533 CCDC174Q6PII3 467 aa16.95■□□□□ 0.3
DDR1-260ENST00000507533 C16orf59Q7L2K0 433 aa16.95■□□□□ 0.3
DDR1-260ENST00000507533 MIGA1Q8NAN2 632 aa16.95■□□□□ 0.3
DDR1-260ENST00000507533 STARD7Q9NQZ5 370 aa16.95■□□□□ 0.3
DDR1-260ENST00000507533 CHD9Q3L8U1 2897 aa16.94■□□□□ 0.3
DDR1-260ENST00000507533 CCER2I3L3R5 266 aa16.94■□□□□ 0.3
DDR1-260ENST00000507533 TAL1P17542 331 aaPredicted RBP16.94■□□□□ 0.3
DDR1-260ENST00000507533 ACLYP53396 1101 aa16.94■□□□□ 0.3
DDR1-260ENST00000507533 SLFN5Q08AF3 891 aa16.94■□□□□ 0.3
DDR1-260ENST00000507533 RASIP1Q5U651 963 aa16.94■□□□□ 0.3
DDR1-260ENST00000507533 CERS3Q8IU89 383 aa16.94■□□□□ 0.3
DDR1-260ENST00000507533 NUP133Q8WUM0 1156 aa16.94■□□□□ 0.3
DDR1-260ENST00000507533 NECAB3Q96P71 396 aaPredicted RBP16.94■□□□□ 0.3
DDR1-260ENST00000507533 DBNDD2Q9BQY9 259 aa16.94■□□□□ 0.3
DDR1-260ENST00000507533 TINF2Q9BSI4 451 aa16.94■□□□□ 0.3
DDR1-260ENST00000507533 TSEN34Q9BSV6 310 aaKnown RBP16.94■□□□□ 0.3
DDR1-260ENST00000507533 TBX21Q9UL17 535 aa16.94■□□□□ 0.3
DDR1-260ENST00000507533 MPHOSPH10O00566 681 aaKnown RBP16.93■□□□□ 0.3
DDR1-260ENST00000507533 PGK2P07205 417 aa16.93■□□□□ 0.3
DDR1-260ENST00000507533 AKR1A1P14550 325 aa16.93■□□□□ 0.3
DDR1-260ENST00000507533 PLCD1P51178 756 aa16.93■□□□□ 0.3
DDR1-260ENST00000507533 LENG1Q96BZ8 264 aaPredicted RBP16.93■□□□□ 0.3
DDR1-260ENST00000507533 ATG4CQ96DT6 458 aa16.93■□□□□ 0.3
DDR1-260ENST00000507533 MMP19Q99542 508 aa16.93■□□□□ 0.3
DDR1-260ENST00000507533 TSPYL2Q9H2G4 693 aaPredicted RBP16.93■□□□□ 0.3
DDR1-260ENST00000507533 MSRAQ9UJ68 235 aa16.93■□□□□ 0.3
DDR1-260ENST00000507533 FOCADQ5VW36 1801 aa16.93■□□□□ 0.3
DDR1-260ENST00000507533 CDK5RAP2Q96SN8 1893 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms