RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 CYP2C19P33261 490 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 CCNA1P78396 465 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 ATP2B2Q01814 1243 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 USP17L24Q0WX57 530 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 SHHQ15465 462 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 GJC2Q5T442 439 aaPredicted RBP16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 SLC9C2Q5TAH2 1124 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 RPAP2Q8IXW5 612 aaPredicted RBP16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 CLASRPQ8N2M8 674 aaKnown RBP16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 ACER1Q8TDN7 264 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 LPAR1Q92633 364 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 C12orf42Q96LP6 360 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 RABGAP1Q9Y3P9 1069 aa16.25■□□□□ 0.19
POLR2J3-212ENST00000507355 MSCO60682 206 aa16.24■□□□□ 0.19
POLR2J3-212ENST00000507355 PDE6AP16499 860 aa16.24■□□□□ 0.19
POLR2J3-212ENST00000507355 SHMT1P34896 483 aa16.24■□□□□ 0.19
POLR2J3-212ENST00000507355 USP14P54578 494 aa16.24■□□□□ 0.19
POLR2J3-212ENST00000507355 C9orf50Q5SZB4 431 aa16.24■□□□□ 0.19
POLR2J3-212ENST00000507355 CATSPERGQ6ZRH7 1159 aa16.24■□□□□ 0.19
POLR2J3-212ENST00000507355 TRPV1Q8NER1 839 aa16.24■□□□□ 0.19
POLR2J3-212ENST00000507355 MYLIPQ8WY64 445 aa16.24■□□□□ 0.19
POLR2J3-212ENST00000507355 KIF1BPQ96EK5 621 aa16.24■□□□□ 0.19
POLR2J3-212ENST00000507355 CRNKL1Q9BZJ0 848 aaKnown RBP16.24■□□□□ 0.19
POLR2J3-212ENST00000507355 KIAA1683Q9H0B3 1180 aa16.24■□□□□ 0.19
POLR2J3-212ENST00000507355 SEMA6BQ9H3T3 888 aa16.24■□□□□ 0.19
POLR2J3-212ENST00000507355 COG6Q9Y2V7 657 aa16.24■□□□□ 0.19
POLR2J3-212ENST00000507355 IVNS1ABPQ9Y6Y0 642 aa16.24■□□□□ 0.19
POLR2J3-212ENST00000507355 RLFQ13129 1914 aa16.23■□□□□ 0.19
POLR2J3-212ENST00000507355 ZNF532Q9HCE3 1301 aa16.23■□□□□ 0.19
POLR2J3-212ENST00000507355 SLC15A5A6NIM6 579 aa16.23■□□□□ 0.19
POLR2J3-212ENST00000507355 GOLIM4O00461 696 aa16.23■□□□□ 0.19
POLR2J3-212ENST00000507355 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
POLR2J3-212ENST00000507355 PTPREP23469 700 aa16.23■□□□□ 0.19
POLR2J3-212ENST00000507355 SIRT2Q8IXJ6 389 aa16.23■□□□□ 0.19
POLR2J3-212ENST00000507355 NPLOC4Q8TAT6 608 aa16.23■□□□□ 0.19
POLR2J3-212ENST00000507355 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.23■□□□□ 0.19
POLR2J3-212ENST00000507355 DNAJC2Q99543 621 aaKnown RBP16.23■□□□□ 0.19
POLR2J3-212ENST00000507355 PRDM6Q9NQX0 595 aa16.23■□□□□ 0.19
POLR2J3-212ENST00000507355 ZBTB40Q9NUA8 1239 aa16.23■□□□□ 0.19
POLR2J3-212ENST00000507355 MCM9Q9NXL9 1143 aa16.23■□□□□ 0.19
POLR2J3-212ENST00000507355 HMMRO75330 724 aa16.22■□□□□ 0.19
POLR2J3-212ENST00000507355 FOSL2P15408 326 aa16.22■□□□□ 0.19
POLR2J3-212ENST00000507355 GUCY1A2P33402 732 aa16.22■□□□□ 0.19
POLR2J3-212ENST00000507355 EVX2Q03828 476 aa16.22■□□□□ 0.19
POLR2J3-212ENST00000507355 GABPAQ06546 454 aa16.22■□□□□ 0.19
POLR2J3-212ENST00000507355 GRB14Q14449 540 aa16.22■□□□□ 0.19
POLR2J3-212ENST00000507355 ANO1Q5XXA6 986 aa16.22■□□□□ 0.19
POLR2J3-212ENST00000507355 BADQ92934 168 aa16.22■□□□□ 0.19
POLR2J3-212ENST00000507355 BTBD7Q9P203 1132 aa16.22■□□□□ 0.19
POLR2J3-212ENST00000507355 DDX19BQ9UMR2 479 aa16.22■□□□□ 0.19
POLR2J3-212ENST00000507355 TCRBV5S4A2TA0A5A2 114 aa16.21■□□□□ 0.19
POLR2J3-212ENST00000507355 KBTBD13C9JR72 458 aa16.21■□□□□ 0.19
POLR2J3-212ENST00000507355 RAB11FIP3O75154 756 aa16.21■□□□□ 0.19
POLR2J3-212ENST00000507355 VCAM1P19320 739 aa16.21■□□□□ 0.19
POLR2J3-212ENST00000507355 SEPT2Q15019 361 aa16.21■□□□□ 0.19
POLR2J3-212ENST00000507355 TRIM60Q495X7 471 aa16.21■□□□□ 0.19
POLR2J3-212ENST00000507355 SDR42E1Q8WUS8 393 aa16.21■□□□□ 0.19
POLR2J3-212ENST00000507355 TTYH1Q9H313 450 aaPredicted RBP16.21■□□□□ 0.19
POLR2J3-212ENST00000507355 MPHOSPH10O00566 681 aaKnown RBP16.2■□□□□ 0.18
POLR2J3-212ENST00000507355 HOXC6P09630 235 aa16.2■□□□□ 0.18
POLR2J3-212ENST00000507355 CYBAP13498 195 aa16.2■□□□□ 0.18
POLR2J3-212ENST00000507355 LBX2Q6XYB7 198 aa16.2■□□□□ 0.18
POLR2J3-212ENST00000507355 SLC39A5Q6ZMH5 540 aa16.2■□□□□ 0.18
POLR2J3-212ENST00000507355 LCORLQ8N3X6 602 aa16.2■□□□□ 0.18
POLR2J3-212ENST00000507355 ARRDC4Q8NCT1 418 aa16.2■□□□□ 0.18
POLR2J3-212ENST00000507355 BOLA2Q9H3K6 86 aa16.2■□□□□ 0.18
POLR2J3-212ENST00000507355 RPAP3Q9H6T3 665 aaPredicted RBP16.2■□□□□ 0.18
POLR2J3-212ENST00000507355 ARMT1Q9H993 441 aa16.2■□□□□ 0.18
POLR2J3-212ENST00000507355 DCP1AQ9NPI6 582 aaPredicted RBP16.2■□□□□ 0.18
POLR2J3-212ENST00000507355 A0A1W2PRG0 241 aa16.19■□□□□ 0.18
POLR2J3-212ENST00000507355 CYP2D6P10635 497 aa16.19■□□□□ 0.18
POLR2J3-212ENST00000507355 SLFNL1Q499Z3 407 aa16.19■□□□□ 0.18
POLR2J3-212ENST00000507355 SH3RF1Q7Z6J0 888 aa16.19■□□□□ 0.18
POLR2J3-212ENST00000507355 DPP9Q86TI2 863 aa16.19■□□□□ 0.18
POLR2J3-212ENST00000507355 FERMT2Q96AC1 680 aa16.19■□□□□ 0.18
POLR2J3-212ENST00000507355 PDLIM7Q9NR12 457 aa16.19■□□□□ 0.18
POLR2J3-212ENST00000507355 PAG1Q9NWQ8 432 aa16.19■□□□□ 0.18
POLR2J3-212ENST00000507355 SPDYE16A6NNV3 312 aaPredicted RBP16.18■□□□□ 0.18
POLR2J3-212ENST00000507355 PRKAB2O43741 272 aa16.18■□□□□ 0.18
POLR2J3-212ENST00000507355 ADORA2AP29274 412 aa16.18■□□□□ 0.18
POLR2J3-212ENST00000507355 SMAD3P84022 425 aaKnown RBP16.18■□□□□ 0.18
POLR2J3-212ENST00000507355 DYNLL2Q96FJ2 89 aa16.18■□□□□ 0.18
POLR2J3-212ENST00000507355 ZNF236Q9UL36 1845 aa16.17■□□□□ 0.18
POLR2J3-212ENST00000507355 TRIM43BA6NCK2 446 aa16.17■□□□□ 0.18
POLR2J3-212ENST00000507355 ATP5JP18859 108 aa16.17■□□□□ 0.18
POLR2J3-212ENST00000507355 ADD2P35612 726 aa16.17■□□□□ 0.18
POLR2J3-212ENST00000507355 ADCYAP1R1P41586 468 aa16.17■□□□□ 0.18
POLR2J3-212ENST00000507355 COG2Q14746 738 aa16.17■□□□□ 0.18
POLR2J3-212ENST00000507355 SLC44A5Q8NCS7 719 aa16.17■□□□□ 0.18
POLR2J3-212ENST00000507355 TRIM43Q96BQ3 446 aaPredicted RBP16.17■□□□□ 0.18
POLR2J3-212ENST00000507355 CHMP4BQ9H444 224 aaKnown RBP16.17■□□□□ 0.18
POLR2J3-212ENST00000507355 HOXC10Q9NYD6 342 aa16.17■□□□□ 0.18
POLR2J3-212ENST00000507355 NAV1Q8NEY1 1877 aa16.16■□□□□ 0.18
POLR2J3-212ENST00000507355 MBD4O95243 580 aa16.16■□□□□ 0.18
POLR2J3-212ENST00000507355 SNX17Q15036 470 aa16.16■□□□□ 0.18
POLR2J3-212ENST00000507355 PRAMEF19Q5SWL8 479 aa16.16■□□□□ 0.18
POLR2J3-212ENST00000507355 RNPC3Q96LT9 517 aaKnown RBP16.16■□□□□ 0.18
POLR2J3-212ENST00000507355 TANGO6Q9C0B7 1094 aa16.16■□□□□ 0.18
POLR2J3-212ENST00000507355 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
POLR2J3-212ENST00000507355 SWAP70Q9UH65 585 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms