RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 HOXC10Q9NYD6 342 aa20.06■□□□□ 0.8
SNF8-205ENST00000507302 A0A1W2PRG0 241 aa20.05■□□□□ 0.8
SNF8-205ENST00000507302 COBLO75128 1261 aa20.05■□□□□ 0.8
SNF8-205ENST00000507302 USP5P45974 858 aa20.05■□□□□ 0.8
SNF8-205ENST00000507302 WDR78Q5VTH9 848 aa20.05■□□□□ 0.8
SNF8-205ENST00000507302 ABRAQ8N0Z2 381 aa20.05■□□□□ 0.8
SNF8-205ENST00000507302 MIGA1Q8NAN2 632 aa20.05■□□□□ 0.8
SNF8-205ENST00000507302 EAF2Q96CJ1 260 aaPredicted RBP20.05■□□□□ 0.8
SNF8-205ENST00000507302 SPATC1LQ9H0A9 340 aa20.05■□□□□ 0.8
SNF8-205ENST00000507302 TLR7Q9NYK1 1049 aaKnown RBP20.05■□□□□ 0.8
SNF8-205ENST00000507302 ATP11BQ9Y2G3 1177 aa20.05■□□□□ 0.8
SNF8-205ENST00000507302 SMCHD1A6NHR9 2005 aa20.05■□□□□ 0.8
SNF8-205ENST00000507302 TMEM265A0A087WTH1 108 aa20.04■□□□□ 0.8
SNF8-205ENST00000507302 DPP9Q86TI2 863 aa20.04■□□□□ 0.8
SNF8-205ENST00000507302 MAGEB6Q8N7X4 407 aa20.04■□□□□ 0.8
SNF8-205ENST00000507302 MAFAQ8NHW3 353 aaPredicted RBP20.04■□□□□ 0.8
SNF8-205ENST00000507302 BADQ92934 168 aa20.04■□□□□ 0.8
SNF8-205ENST00000507302 CABP5Q9NP86 173 aa20.04■□□□□ 0.8
SNF8-205ENST00000507302 TRIM43BA6NCK2 446 aa20.03■□□□□ 0.8
SNF8-205ENST00000507302 KBTBD13C9JR72 458 aa20.03■□□□□ 0.8
SNF8-205ENST00000507302 IDH1O75874 414 aaKnown RBP20.03■□□□□ 0.8
SNF8-205ENST00000507302 SEPT2Q15019 361 aa20.03■□□□□ 0.8
SNF8-205ENST00000507302 TRIM60Q495X7 471 aa20.03■□□□□ 0.8
SNF8-205ENST00000507302 MB21D1Q8N884 522 aa20.03■□□□□ 0.8
SNF8-205ENST00000507302 TRIM43Q96BQ3 446 aaPredicted RBP20.03■□□□□ 0.8
SNF8-205ENST00000507302 ROBO3Q96MS0 1386 aa20.03■□□□□ 0.8
SNF8-205ENST00000507302 SURF6O75683 361 aaKnown RBP20.02■□□□□ 0.8
SNF8-205ENST00000507302 BCAR3O75815 825 aa20.02■□□□□ 0.8
SNF8-205ENST00000507302 ERCC3P19447 782 aa20.02■□□□□ 0.8
SNF8-205ENST00000507302 LRRC41Q15345 812 aa20.02■□□□□ 0.8
SNF8-205ENST00000507302 SH3RF1Q7Z6J0 888 aa20.02■□□□□ 0.8
SNF8-205ENST00000507302 TMEM57Q8N5G2 664 aa20.02■□□□□ 0.8
SNF8-205ENST00000507302 MROH8Q9H579 483 aa20.02■□□□□ 0.8
SNF8-205ENST00000507302 ANTXR1Q9H6X2 564 aa20.02■□□□□ 0.8
SNF8-205ENST00000507302 NRBP1Q9UHY1 535 aa20.02■□□□□ 0.8
SNF8-205ENST00000507302 PHF24Q9UPV7 400 aa20.02■□□□□ 0.8
SNF8-205ENST00000507302 DSG3P32926 999 aa20.01■□□□□ 0.79
SNF8-205ENST00000507302 KIAA1755Q5JYT7 1200 aa20.01■□□□□ 0.79
SNF8-205ENST00000507302 MAML3Q96JK9 1138 aa20.01■□□□□ 0.79
SNF8-205ENST00000507302 MYH8P13535 1937 aa20.01■□□□□ 0.79
SNF8-205ENST00000507302 COL11A1P12107 1806 aaPredicted RBP20.01■□□□□ 0.79
SNF8-205ENST00000507302 PLXNA1Q9UIW2 1896 aa20.01■□□□□ 0.79
SNF8-205ENST00000507302 ITGB8P26012 769 aa20■□□□□ 0.79
SNF8-205ENST00000507302 ADCYAP1R1P41586 468 aa20■□□□□ 0.79
SNF8-205ENST00000507302 MAP3K12Q12852 859 aa20■□□□□ 0.79
SNF8-205ENST00000507302 OS9Q13438 667 aaPredicted RBP20■□□□□ 0.79
SNF8-205ENST00000507302 SIAH1Q8IUQ4 282 aa20■□□□□ 0.79
SNF8-205ENST00000507302 MYLIPQ8WY64 445 aa20■□□□□ 0.79
SNF8-205ENST00000507302 CLUAP1Q96AJ1 413 aa20■□□□□ 0.79
SNF8-205ENST00000507302 CCDC8Q9H0W5 538 aaPredicted RBP20■□□□□ 0.79
SNF8-205ENST00000507302 PRDM6Q9NQX0 595 aa20■□□□□ 0.79
SNF8-205ENST00000507302 SLC5A4Q9NY91 659 aa20■□□□□ 0.79
SNF8-205ENST00000507302 ADAMTS5Q9UNA0 930 aa20■□□□□ 0.79
SNF8-205ENST00000507302 KIAA0355O15063 1070 aa19.99■□□□□ 0.79
SNF8-205ENST00000507302 EVX2Q03828 476 aa19.99■□□□□ 0.79
SNF8-205ENST00000507302 FAM47AQ5JRC9 791 aa19.99■□□□□ 0.79
SNF8-205ENST00000507302 ANO1Q5XXA6 986 aa19.99■□□□□ 0.79
SNF8-205ENST00000507302 TLE2Q04725 743 aa19.98■□□□□ 0.79
SNF8-205ENST00000507302 PRAMEF19Q5SWL8 479 aa19.98■□□□□ 0.79
SNF8-205ENST00000507302 PRDM5Q9NQX1 630 aaPredicted RBP19.98■□□□□ 0.79
SNF8-205ENST00000507302 TMX2Q9Y320 296 aa19.98■□□□□ 0.79
SNF8-205ENST00000507302 TACC3Q9Y6A5 838 aa19.98■□□□□ 0.79
SNF8-205ENST00000507302 EPHB4P54760 987 aa19.97■□□□□ 0.79
SNF8-205ENST00000507302 TMEM179Q6ZVK1 233 aa19.97■□□□□ 0.79
SNF8-205ENST00000507302 FRAT1Q92837 279 aaPredicted RBP19.97■□□□□ 0.79
SNF8-205ENST00000507302 TANGO6Q9C0B7 1094 aa19.97■□□□□ 0.79
SNF8-205ENST00000507302 POLR3DP05423 398 aaPredicted RBP19.96■□□□□ 0.79
SNF8-205ENST00000507302 ZKSCAN2Q63HK3 967 aa19.96■□□□□ 0.79
SNF8-205ENST00000507302 DIS3Q9Y2L1 958 aaKnown RBP19.96■□□□□ 0.79
SNF8-205ENST00000507302 CHD9Q3L8U1 2897 aa19.95■□□□□ 0.78
SNF8-205ENST00000507302 MAGEB6P1A0A0J9YX57 407 aa19.95■□□□□ 0.78
SNF8-205ENST00000507302 TCRBV5S4A2TA0A5A2 114 aa19.95■□□□□ 0.78
SNF8-205ENST00000507302 SLC25A27O95847 323 aa19.95■□□□□ 0.78
SNF8-205ENST00000507302 CLTBP09497 229 aa19.95■□□□□ 0.78
SNF8-205ENST00000507302 TMEM132BQ14DG7 1078 aa19.95■□□□□ 0.78
SNF8-205ENST00000507302 ANKRD33Q7Z3H0 272 aa19.95■□□□□ 0.78
SNF8-205ENST00000507302 SYMPKQ92797 1274 aaKnown RBP19.95■□□□□ 0.78
SNF8-205ENST00000507302 FERMT2Q96AC1 680 aa19.95■□□□□ 0.78
SNF8-205ENST00000507302 ATG4CQ96DT6 458 aa19.95■□□□□ 0.78
SNF8-205ENST00000507302 CRNKL1Q9BZJ0 848 aaKnown RBP19.95■□□□□ 0.78
SNF8-205ENST00000507302 DCP1AQ9NPI6 582 aaPredicted RBP19.95■□□□□ 0.78
SNF8-205ENST00000507302 SWAP70Q9UH65 585 aa19.95■□□□□ 0.78
SNF8-205ENST00000507302 FCER1AP12319 257 aa19.94■□□□□ 0.78
SNF8-205ENST00000507302 FOSL2P15408 326 aa19.94■□□□□ 0.78
SNF8-205ENST00000507302 PDE6AP16499 860 aa19.94■□□□□ 0.78
SNF8-205ENST00000507302 ZNF792Q3KQV3 632 aa19.94■□□□□ 0.78
SNF8-205ENST00000507302 TOX2Q96NM4 488 aa19.94■□□□□ 0.78
SNF8-205ENST00000507302 C1orf115Q9H7X2 142 aa19.94■□□□□ 0.78
SNF8-205ENST00000507302 VCPKMTQ9H867 229 aa19.94■□□□□ 0.78
SNF8-205ENST00000507302 XPNPEP3Q9NQH7 507 aa19.94■□□□□ 0.78
SNF8-205ENST00000507302 MCM9Q9NXL9 1143 aa19.94■□□□□ 0.78
SNF8-205ENST00000507302 WDR46O15213 610 aaKnown RBP19.93■□□□□ 0.78
SNF8-205ENST00000507302 ADAMTS4O75173 837 aa19.93■□□□□ 0.78
SNF8-205ENST00000507302 FLOT1O75955 427 aa19.93■□□□□ 0.78
SNF8-205ENST00000507302 ZNF865P0CJ78 1059 aaPredicted RBP19.93■□□□□ 0.78
SNF8-205ENST00000507302 RARBP10826 455 aa19.93■□□□□ 0.78
SNF8-205ENST00000507302 TTF1Q15361 905 aaPredicted RBP19.93■□□□□ 0.78
SNF8-205ENST00000507302 NCAPG2Q86XI2 1143 aa19.93■□□□□ 0.78
SNF8-205ENST00000507302 RIOX2Q8IUF8 465 aa19.93■□□□□ 0.78
SNF8-205ENST00000507302 SLC44A5Q8NCS7 719 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms