RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 ATP8A2Q9NTI2 1148 aa13.93□□□□□ -0.18
HMGCS1-204ENST00000507293 SWAP70Q9UH65 585 aa13.93□□□□□ -0.18
HMGCS1-204ENST00000507293 SLC15A5A6NIM6 579 aa13.92□□□□□ -0.18
HMGCS1-204ENST00000507293 AKR1B1P15121 316 aa13.92□□□□□ -0.18
HMGCS1-204ENST00000507293 PTPREP23469 700 aa13.92□□□□□ -0.18
HMGCS1-204ENST00000507293 CLEC10AQ8IUN9 316 aa13.92□□□□□ -0.18
HMGCS1-204ENST00000507293 TANGO6Q9C0B7 1094 aa13.92□□□□□ -0.18
HMGCS1-204ENST00000507293 FLRT1Q9NZU1 646 aa13.92□□□□□ -0.18
HMGCS1-204ENST00000507293 GREB1LQ9C091 1923 aaPredicted RBP13.92□□□□□ -0.18
HMGCS1-204ENST00000507293 CYP2D7A0A087X1C5 515 aa13.91□□□□□ -0.18
HMGCS1-204ENST00000507293 SMIM22K7EJ46 135 aa13.91□□□□□ -0.18
HMGCS1-204ENST00000507293 UBE3CQ15386 1083 aa13.91□□□□□ -0.18
HMGCS1-204ENST00000507293 KIAA1755Q5JYT7 1200 aa13.91□□□□□ -0.18
HMGCS1-204ENST00000507293 STAP2Q9UGK3 403 aa13.91□□□□□ -0.18
HMGCS1-204ENST00000507293 ZMYND8Q9ULU4 1186 aaPredicted RBP13.91□□□□□ -0.18
HMGCS1-204ENST00000507293 IVNS1ABPQ9Y6Y0 642 aa13.91□□□□□ -0.18
HMGCS1-204ENST00000507293 ZNFX1Q9P2E3 1918 aaKnown RBP13.91□□□□□ -0.18
HMGCS1-204ENST00000507293 PFASO15067 1338 aa13.9□□□□□ -0.18
HMGCS1-204ENST00000507293 USP17L12C9JPN9 530 aa13.9□□□□□ -0.18
HMGCS1-204ENST00000507293 USP17L21D6R901 530 aa13.9□□□□□ -0.18
HMGCS1-204ENST00000507293 ICA1Q05084 483 aa13.9□□□□□ -0.18
HMGCS1-204ENST00000507293 GRB14Q14449 540 aa13.9□□□□□ -0.18
HMGCS1-204ENST00000507293 COG2Q14746 738 aa13.9□□□□□ -0.18
HMGCS1-204ENST00000507293 C12orf60Q5U649 245 aa13.9□□□□□ -0.18
HMGCS1-204ENST00000507293 MFSD14CQ5VZR4 134 aa13.9□□□□□ -0.18
HMGCS1-204ENST00000507293 LHX8Q68G74 356 aa13.9□□□□□ -0.18
HMGCS1-204ENST00000507293 AMOTL1Q8IY63 956 aa13.9□□□□□ -0.18
HMGCS1-204ENST00000507293 NPLOC4Q8TAT6 608 aa13.9□□□□□ -0.18
HMGCS1-204ENST00000507293 DDRGK1Q96HY6 314 aa13.9□□□□□ -0.18
HMGCS1-204ENST00000507293 ARHGEF10LQ9HCE6 1279 aa13.9□□□□□ -0.18
HMGCS1-204ENST00000507293 SLC4A4Q9Y6R1 1079 aa13.9□□□□□ -0.18
HMGCS1-204ENST00000507293 PLXNA1Q9UIW2 1896 aa13.89□□□□□ -0.19
HMGCS1-204ENST00000507293 CDK8P49336 464 aa13.89□□□□□ -0.19
HMGCS1-204ENST00000507293 ZSCAN25Q6NSZ9 544 aa13.89□□□□□ -0.19
HMGCS1-204ENST00000507293 C16orf86Q6ZW13 317 aa13.89□□□□□ -0.19
HMGCS1-204ENST00000507293 SIAH1Q8IUQ4 282 aa13.89□□□□□ -0.19
HMGCS1-204ENST00000507293 SPICE1Q8N0Z3 855 aa13.89□□□□□ -0.19
HMGCS1-204ENST00000507293 LPAR1Q92633 364 aa13.89□□□□□ -0.19
HMGCS1-204ENST00000507293 CCDC17Q96LX7 622 aa13.89□□□□□ -0.19
HMGCS1-204ENST00000507293 MOV10L1Q9BXT6 1211 aaKnown RBP13.89□□□□□ -0.19
HMGCS1-204ENST00000507293 PUS7LQ9H0K6 701 aaKnown RBP13.89□□□□□ -0.19
HMGCS1-204ENST00000507293 SH2D4AQ9H788 454 aa13.89□□□□□ -0.19
HMGCS1-204ENST00000507293 HOXC10Q9NYD6 342 aa13.89□□□□□ -0.19
HMGCS1-204ENST00000507293 TMX2Q9Y320 296 aa13.89□□□□□ -0.19
HMGCS1-204ENST00000507293 MYH4Q9Y623 1939 aa13.88□□□□□ -0.19
HMGCS1-204ENST00000507293 A0A1W2PPC1 479 aa13.88□□□□□ -0.19
HMGCS1-204ENST00000507293 HOXC6P09630 235 aa13.88□□□□□ -0.19
HMGCS1-204ENST00000507293 COL6A1P12109 1028 aa13.88□□□□□ -0.19
HMGCS1-204ENST00000507293 SYN1P17600 705 aa13.88□□□□□ -0.19
HMGCS1-204ENST00000507293 ATP2B2Q01814 1243 aa13.88□□□□□ -0.19
HMGCS1-204ENST00000507293 SHCBP1Q8NEM2 672 aa13.88□□□□□ -0.19
HMGCS1-204ENST00000507293 SPATC1LQ9H0A9 340 aa13.88□□□□□ -0.19
HMGCS1-204ENST00000507293 VCPKMTQ9H867 229 aa13.88□□□□□ -0.19
HMGCS1-204ENST00000507293 ECHDC1Q9NTX5 307 aa13.88□□□□□ -0.19
HMGCS1-204ENST00000507293 FLOT1O75955 427 aa13.87□□□□□ -0.19
HMGCS1-204ENST00000507293 ERCC3P19447 782 aa13.87□□□□□ -0.19
HMGCS1-204ENST00000507293 ADORA2AP29274 412 aa13.87□□□□□ -0.19
HMGCS1-204ENST00000507293 CNGA1P29973 690 aa13.87□□□□□ -0.19
HMGCS1-204ENST00000507293 DSG3P32926 999 aa13.87□□□□□ -0.19
HMGCS1-204ENST00000507293 CYP2C19P33261 490 aa13.87□□□□□ -0.19
HMGCS1-204ENST00000507293 CTR9Q6PD62 1173 aa13.87□□□□□ -0.19
HMGCS1-204ENST00000507293 SAMD1Q6SPF0 538 aaPredicted RBP13.87□□□□□ -0.19
HMGCS1-204ENST00000507293 MB21D1Q8N884 522 aa13.87□□□□□ -0.19
HMGCS1-204ENST00000507293 ATG4CQ96DT6 458 aa13.87□□□□□ -0.19
HMGCS1-204ENST00000507293 GDF15Q99988 308 aa13.87□□□□□ -0.19
HMGCS1-204ENST00000507293 ARPP21Q9UBL0 812 aaPredicted RBP13.87□□□□□ -0.19
HMGCS1-204ENST00000507293 DDX20Q9UHI6 824 aaKnown RBP13.87□□□□□ -0.19
HMGCS1-204ENST00000507293 SOX1O00570 391 aaPredicted RBP13.86□□□□□ -0.19
HMGCS1-204ENST00000507293 WDR46O15213 610 aaKnown RBP13.86□□□□□ -0.19
HMGCS1-204ENST00000507293 EEF2P13639 858 aaKnown RBP13.86□□□□□ -0.19
HMGCS1-204ENST00000507293 PLS1Q14651 629 aa13.86□□□□□ -0.19
HMGCS1-204ENST00000507293 LRRC26Q2I0M4 334 aa13.86□□□□□ -0.19
HMGCS1-204ENST00000507293 TSHZ3Q63HK5 1081 aa13.86□□□□□ -0.19
HMGCS1-204ENST00000507293 DPP9Q86TI2 863 aa13.86□□□□□ -0.19
HMGCS1-204ENST00000507293 TRPV1Q8NER1 839 aa13.86□□□□□ -0.19
HMGCS1-204ENST00000507293 STRBPQ96SI9 672 aaKnown RBP13.86□□□□□ -0.19
HMGCS1-204ENST00000507293 STRNO43815 780 aa13.85□□□□□ -0.19
HMGCS1-204ENST00000507293 MSCO60682 206 aa13.85□□□□□ -0.19
HMGCS1-204ENST00000507293 IGHA2P01877 340 aa13.85□□□□□ -0.19
HMGCS1-204ENST00000507293 CYBAP13498 195 aa13.85□□□□□ -0.19
HMGCS1-204ENST00000507293 BMP8BP34820 402 aa13.85□□□□□ -0.19
HMGCS1-204ENST00000507293 MAGEA10P43363 369 aaPredicted RBP13.85□□□□□ -0.19
HMGCS1-204ENST00000507293 NCAPG2Q86XI2 1143 aa13.85□□□□□ -0.19
HMGCS1-204ENST00000507293 KBTBD3Q8NAB2 608 aa13.85□□□□□ -0.19
HMGCS1-204ENST00000507293 GPATCH3Q96I76 525 aa13.85□□□□□ -0.19
HMGCS1-204ENST00000507293 MROH8Q9H579 483 aa13.85□□□□□ -0.19
HMGCS1-204ENST00000507293 DCTPP1Q9H773 170 aa13.85□□□□□ -0.19
HMGCS1-204ENST00000507293 KANSL2Q9H9L4 492 aa13.85□□□□□ -0.19
HMGCS1-204ENST00000507293 LTBP2Q14767 1821 aa13.85□□□□□ -0.19
HMGCS1-204ENST00000507293 RAD21O60216 631 aa13.84□□□□□ -0.19
HMGCS1-204ENST00000507293 COBLO75128 1261 aa13.84□□□□□ -0.19
HMGCS1-204ENST00000507293 TMEM132BQ14DG7 1078 aa13.84□□□□□ -0.19
HMGCS1-204ENST00000507293 OLFML2BQ68BL8 750 aa13.84□□□□□ -0.19
HMGCS1-204ENST00000507293 STK11IPQ8N1F8 1099 aa13.84□□□□□ -0.19
HMGCS1-204ENST00000507293 APPBP2Q92624 585 aa13.84□□□□□ -0.19
HMGCS1-204ENST00000507293 OSBP2Q969R2 916 aa13.84□□□□□ -0.19
HMGCS1-204ENST00000507293 LRCH3Q96II8 777 aa13.84□□□□□ -0.19
HMGCS1-204ENST00000507293 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.84□□□□□ -0.19
HMGCS1-204ENST00000507293 GOPCQ9HD26 462 aa13.84□□□□□ -0.19
HMGCS1-204ENST00000507293 FBXO28Q9NVF7 368 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms