RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 CCDC192P0DO97 292 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 KIF5BP33176 963 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 TUFMP49411 452 aaKnown RBP6.88□□□□□ -1.31
PDE4D-216ENST00000507116 KLC1Q07866 573 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 PKP1Q13835 747 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 IMMTQ16891 758 aaKnown RBP6.88□□□□□ -1.31
PDE4D-216ENST00000507116 ACCSLQ4AC99 568 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 ZNF554Q86TJ5 538 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 PLA2G4DQ86XP0 818 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 GRAMD2AQ8IUY3 354 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 FUKQ8N0W3 1084 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 FRS2Q8WU20 508 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 LEO1Q8WVC0 666 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-216ENST00000507116 FUCA2Q9BTY2 467 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 PARVGQ9HBI0 331 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 DISC1Q9NRI5 854 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 BLMP54132 1417 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-216ENST00000507116 KIF21BO75037 1637 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 WDR46O15213 610 aaKnown RBP6.88□□□□□ -1.31
PDE4D-216ENST00000507116 SLC16A2P36021 539 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 CD97P48960 835 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 SHROOM1Q2M3G4 852 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-216ENST00000507116 C10orf76Q5T2E6 689 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 SLC2A7Q6PXP3 512 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 BARGINQ6ZT62 677 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 SRGAP1Q7Z6B7 1085 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 CABP7Q86V35 215 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 ERICH1Q86X53 443 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 CCDC146Q8IYE0 955 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 ARHGAP18Q8N392 663 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 LINC00469Q8N7U9 141 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 UROC1Q96N76 676 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 SMC6Q96SB8 1091 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 NUP58Q9BVL2 599 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 OSBPL1AQ9BXW6 950 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 TRIM5Q9C035 493 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 CLK4Q9HAZ1 481 aaKnown RBP6.88□□□□□ -1.31
PDE4D-216ENST00000507116 KRT82Q9NSB4 513 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 XPO7Q9UIA9 1087 aaKnown RBP6.88□□□□□ -1.31
PDE4D-216ENST00000507116 NOSIPQ9Y314 301 aaKnown RBP6.88□□□□□ -1.31
PDE4D-216ENST00000507116 ZDHHC9Q9Y397 364 aa6.88□□□□□ -1.31
PDE4D-216ENST00000507116 ANKRD30BQ9BXX2 1392 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 BECN2A8MW95 431 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 N4BP1O75113 896 aaKnown RBP6.87□□□□□ -1.31
PDE4D-216ENST00000507116 RNF40O75150 1001 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 KRT14P02533 472 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 TXLNAP40222 546 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 IRAK1P51617 712 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 POLR2FP61218 127 aaKnown RBP6.87□□□□□ -1.31
PDE4D-216ENST00000507116 TUBA4AP68366 448 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 NEPROQ6NW34 567 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 ZNF365Q70YC5 407 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 LILRB1Q8NHL6 650 aaPredicted RBP6.87□□□□□ -1.31
PDE4D-216ENST00000507116 ASIC4Q96FT7 647 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 C8orf48Q96LL4 319 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 ANKRD27Q96NW4 1050 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 IER2Q9BTL4 223 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 CARD6Q9BX69 1037 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 DNAI2Q9GZS0 605 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 FKBP14Q9NWM8 211 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 SLC45A1Q9Y2W3 748 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 DMRT2Q9Y5R5 561 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 A0A0B4J203 849 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 PSDA5PKW4 1024 aaPredicted RBP6.87□□□□□ -1.31
PDE4D-216ENST00000507116 VAMP4O75379 141 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 LDHBP07195 334 aaKnown RBP6.87□□□□□ -1.31
PDE4D-216ENST00000507116 EIF2S2P20042 333 aaKnown RBP6.87□□□□□ -1.31
PDE4D-216ENST00000507116 USP5P45974 858 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 PEX5P50542 639 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 MTTPP55157 894 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 PLOD1Q02809 727 aaPredicted RBP6.87□□□□□ -1.31
PDE4D-216ENST00000507116 SULT2A1Q06520 285 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 TUBA3CQ13748 450 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 FIP1L1Q6UN15 594 aaKnown RBP6.87□□□□□ -1.31
PDE4D-216ENST00000507116 EXOC3L1Q86VI1 746 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 RBM46Q8TBY0 533 aaKnown RBP6.87□□□□□ -1.31
PDE4D-216ENST00000507116 SPATA17Q96L03 361 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 XPO4Q9C0E2 1151 aaKnown RBP6.87□□□□□ -1.31
PDE4D-216ENST00000507116 ATAD3AQ9NVI7 634 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 NOP53Q9NZM5 478 aaKnown RBP6.87□□□□□ -1.31
PDE4D-216ENST00000507116 GGA2Q9UJY4 613 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 CNPY2Q9Y2B0 182 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 ABCA10Q8WWZ4 1543 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 HFM1A2PYH4 1435 aa6.87□□□□□ -1.31
PDE4D-216ENST00000507116 EIF3HO15372 352 aaKnown RBP eCLIP6.86□□□□□ -1.31
PDE4D-216ENST00000507116 TSPAN1O60635 241 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 TUBB4BP68371 445 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 MRPS35P82673 323 aaKnown RBP6.86□□□□□ -1.31
PDE4D-216ENST00000507116 AMPD3Q01432 767 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 EFCAB2Q5VUJ9 269 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 GRAMD4Q6IC98 578 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 NSUN7Q8NE18 718 aaKnown RBP6.86□□□□□ -1.31
PDE4D-216ENST00000507116 CNKSR1Q969H4 720 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 JPH4Q96JJ6 628 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 TRAPPC9Q96Q05 1148 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 GOLPH3LQ9H4A5 285 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 ABCF3Q9NUQ8 709 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 TBK1Q9UHD2 729 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 MKL2Q9ULH7 1088 aa6.86□□□□□ -1.31
PDE4D-216ENST00000507116 SATB2Q9UPW6 733 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms