RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 A0A1W2PRG0 241 aa16.31■□□□□ 0.2
SERF1B-204ENST00000506542 FKTNO75072 461 aa16.31■□□□□ 0.2
SERF1B-204ENST00000506542 CTDSPL2Q05D32 466 aa16.31■□□□□ 0.2
SERF1B-204ENST00000506542 TOB2Q14106 344 aaPredicted RBP16.31■□□□□ 0.2
SERF1B-204ENST00000506542 GIMAP6Q6P9H5 292 aa16.31■□□□□ 0.2
SERF1B-204ENST00000506542 TBC1D10CQ8IV04 446 aa16.31■□□□□ 0.2
SERF1B-204ENST00000506542 ZSCAN31Q96LW9 406 aaPredicted RBP16.31■□□□□ 0.2
SERF1B-204ENST00000506542 WDR18Q9BV38 432 aa16.31■□□□□ 0.2
SERF1B-204ENST00000506542 MCOLN1Q9GZU1 580 aa16.31■□□□□ 0.2
SERF1B-204ENST00000506542 ZFYVE28Q9HCC9 887 aa16.31■□□□□ 0.2
SERF1B-204ENST00000506542 FOXD4L1Q9NU39 408 aa16.31■□□□□ 0.2
SERF1B-204ENST00000506542 BACE1P56817 501 aa16.3■□□□□ 0.2
SERF1B-204ENST00000506542 EXOSC10Q01780 885 aaKnown RBP16.3■□□□□ 0.2
SERF1B-204ENST00000506542 SIAH1Q8IUQ4 282 aa16.3■□□□□ 0.2
SERF1B-204ENST00000506542 NCOA7Q8NI08 942 aa16.3■□□□□ 0.2
SERF1B-204ENST00000506542 INTS4Q96HW7 963 aaKnown RBP16.3■□□□□ 0.2
SERF1B-204ENST00000506542 ADGRA2Q96PE1 1338 aa16.3■□□□□ 0.2
SERF1B-204ENST00000506542 SH2B1Q9NRF2 756 aaPredicted RBP16.3■□□□□ 0.2
SERF1B-204ENST00000506542 EMILIN3Q9NT22 766 aa16.3■□□□□ 0.2
SERF1B-204ENST00000506542 CIZ1Q9ULV3 898 aaPredicted RBP16.3■□□□□ 0.2
SERF1B-204ENST00000506542 TLR2O60603 784 aa16.3■□□□□ 0.2
SERF1B-204ENST00000506542 CTGFP29279 349 aa16.3■□□□□ 0.2
SERF1B-204ENST00000506542 SBK1Q52WX2 424 aa16.3■□□□□ 0.2
SERF1B-204ENST00000506542 KIAA1755Q5JYT7 1200 aa16.3■□□□□ 0.2
SERF1B-204ENST00000506542 FASTKD5Q7L8L6 764 aaKnown RBP16.3■□□□□ 0.2
SERF1B-204ENST00000506542 AMOTL1Q8IY63 956 aa16.3■□□□□ 0.2
SERF1B-204ENST00000506542 MB21D2Q8IYB1 491 aaPredicted RBP16.3■□□□□ 0.2
SERF1B-204ENST00000506542 LARP6Q9BRS8 491 aaKnown RBP16.3■□□□□ 0.2
SERF1B-204ENST00000506542 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.3■□□□□ 0.2
SERF1B-204ENST00000506542 AS3MTQ9HBK9 375 aa16.3■□□□□ 0.2
SERF1B-204ENST00000506542 CHMP5Q9NZZ3 219 aa16.3■□□□□ 0.2
SERF1B-204ENST00000506542 AGTPBP1Q9UPW5 1226 aa16.3■□□□□ 0.2
SERF1B-204ENST00000506542 GREB1LQ9C091 1923 aaPredicted RBP16.29■□□□□ 0.2
SERF1B-204ENST00000506542 WDR19Q8NEZ3 1342 aa16.29■□□□□ 0.2
SERF1B-204ENST00000506542 USP17L10C9JJH3 530 aa16.29■□□□□ 0.2
SERF1B-204ENST00000506542 RASA1P20936 1047 aa16.29■□□□□ 0.2
SERF1B-204ENST00000506542 Q6ZUG5 572 aa16.29■□□□□ 0.2
SERF1B-204ENST00000506542 FEZ1Q99689 392 aa16.29■□□□□ 0.2
SERF1B-204ENST00000506542 AGXT2Q9BYV1 514 aa16.29■□□□□ 0.2
SERF1B-204ENST00000506542 CWC22Q9HCG8 908 aaKnown RBP16.29■□□□□ 0.2
SERF1B-204ENST00000506542 CABP5Q9NP86 173 aa16.29■□□□□ 0.2
SERF1B-204ENST00000506542 SWAP70Q9UH65 585 aa16.29■□□□□ 0.2
SERF1B-204ENST00000506542 ROBO3Q96MS0 1386 aa16.28■□□□□ 0.2
SERF1B-204ENST00000506542 LARGE1O95461 756 aa16.28■□□□□ 0.2
SERF1B-204ENST00000506542 SP3Q02447 781 aa16.28■□□□□ 0.2
SERF1B-204ENST00000506542 PPARAQ07869 468 aa16.28■□□□□ 0.2
SERF1B-204ENST00000506542 SH3D19Q5HYK7 790 aa16.28■□□□□ 0.2
SERF1B-204ENST00000506542 RALYLQ86SE5 291 aaKnown RBP16.28■□□□□ 0.2
SERF1B-204ENST00000506542 FBXL16Q8N461 479 aa16.28■□□□□ 0.2
SERF1B-204ENST00000506542 NKX2-3Q8TAU0 364 aa16.28■□□□□ 0.2
SERF1B-204ENST00000506542 TPCN1Q9ULQ1 816 aa16.28■□□□□ 0.2
SERF1B-204ENST00000506542 MCM5P33992 734 aa16.27■□□□□ 0.2
SERF1B-204ENST00000506542 ATP2B2Q01814 1243 aa16.27■□□□□ 0.2
SERF1B-204ENST00000506542 TRDNQ13061 729 aa16.27■□□□□ 0.2
SERF1B-204ENST00000506542 ME3Q16798 604 aa16.27■□□□□ 0.2
SERF1B-204ENST00000506542 AKNAD1Q5T1N1 836 aa16.27■□□□□ 0.2
SERF1B-204ENST00000506542 POTEEQ6S8J3 1075 aa16.27■□□□□ 0.2
SERF1B-204ENST00000506542 C17orf99Q6UX52 265 aa16.27■□□□□ 0.2
SERF1B-204ENST00000506542 PROCA1Q8NCQ7 364 aaPredicted RBP16.27■□□□□ 0.2
SERF1B-204ENST00000506542 ASCC2Q9H1I8 757 aaPredicted RBP16.27■□□□□ 0.2
SERF1B-204ENST00000506542 ANAPC4Q9UJX5 808 aa16.27■□□□□ 0.2
SERF1B-204ENST00000506542 MGAMO43451 1857 aa16.27■□□□□ 0.2
SERF1B-204ENST00000506542 DOCK3Q8IZD9 2030 aa16.27■□□□□ 0.2
SERF1B-204ENST00000506542 MYH4Q9Y623 1939 aa16.27■□□□□ 0.2
SERF1B-204ENST00000506542 NEDD4P46934 1319 aa16.27■□□□□ 0.19
SERF1B-204ENST00000506542 FAM47AQ5JRC9 791 aa16.27■□□□□ 0.19
SERF1B-204ENST00000506542 CTU1Q7Z7A3 348 aaKnown RBP16.27■□□□□ 0.19
SERF1B-204ENST00000506542 SPICE1Q8N0Z3 855 aa16.27■□□□□ 0.19
SERF1B-204ENST00000506542 STAG1Q8WVM7 1258 aa16.27■□□□□ 0.19
SERF1B-204ENST00000506542 PARK7Q99497 189 aaKnown RBP16.27■□□□□ 0.19
SERF1B-204ENST00000506542 LRRC2Q9BYS8 371 aa16.27■□□□□ 0.19
SERF1B-204ENST00000506542 MKNK2Q9HBH9 465 aa16.27■□□□□ 0.19
SERF1B-204ENST00000506542 TMOD4Q9NZQ9 345 aa16.27■□□□□ 0.19
SERF1B-204ENST00000506542 TRIM17Q9Y577 477 aa16.27■□□□□ 0.19
SERF1B-204ENST00000506542 ICA1Q05084 483 aa16.26■□□□□ 0.19
SERF1B-204ENST00000506542 NOM1Q5C9Z4 860 aaKnown RBP16.26■□□□□ 0.19
SERF1B-204ENST00000506542 TMEM179Q6ZVK1 233 aa16.26■□□□□ 0.19
SERF1B-204ENST00000506542 OTOP1Q7RTM1 612 aa16.26■□□□□ 0.19
SERF1B-204ENST00000506542 ANKRD13CQ8N6S4 541 aa16.26■□□□□ 0.19
SERF1B-204ENST00000506542 SMCR8Q8TEV9 937 aaPredicted RBP16.26■□□□□ 0.19
SERF1B-204ENST00000506542 BRF1Q92994 677 aa16.26■□□□□ 0.19
SERF1B-204ENST00000506542 CHMP4CQ96CF2 233 aa16.26■□□□□ 0.19
SERF1B-204ENST00000506542 ABHD8Q96I13 439 aa16.26■□□□□ 0.19
SERF1B-204ENST00000506542 P2RX7Q99572 595 aaKnown RBP16.26■□□□□ 0.19
SERF1B-204ENST00000506542 CNNM2Q9H8M5 875 aa16.26■□□□□ 0.19
SERF1B-204ENST00000506542 ZCCHC17Q9NP64 241 aaKnown RBP16.26■□□□□ 0.19
SERF1B-204ENST00000506542 PRC1O43663 620 aa16.25■□□□□ 0.19
SERF1B-204ENST00000506542 EEF2P13639 858 aaKnown RBP16.25■□□□□ 0.19
SERF1B-204ENST00000506542 VCAM1P19320 739 aa16.25■□□□□ 0.19
SERF1B-204ENST00000506542 ANTXR2P58335 489 aa16.25■□□□□ 0.19
SERF1B-204ENST00000506542 FGD1P98174 961 aa16.25■□□□□ 0.19
SERF1B-204ENST00000506542 MFSD6Q6ZSS7 791 aa16.25■□□□□ 0.19
SERF1B-204ENST00000506542 CHST3Q7LGC8 479 aa16.25■□□□□ 0.19
SERF1B-204ENST00000506542 RNF41Q9H4P4 317 aaPredicted RBP16.25■□□□□ 0.19
SERF1B-204ENST00000506542 GINM1Q9NU53 330 aa16.25■□□□□ 0.19
SERF1B-204ENST00000506542 MKI67P46013 3256 aaKnown RBP16.25■□□□□ 0.19
SERF1B-204ENST00000506542 B4E1Z4 1266 aa16.24■□□□□ 0.19
SERF1B-204ENST00000506542 C19orf81C9J6K1 198 aa16.24■□□□□ 0.19
SERF1B-204ENST00000506542 NMT2O60551 498 aa16.24■□□□□ 0.19
SERF1B-204ENST00000506542 BCRP11274 1271 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms