RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 NECAB1Q8N987 351 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 MRVI1Q9Y6F6 885 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 LCTP09848 1927 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 MYH8P13535 1937 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 ZNF445P59923 1031 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 ARSIQ5FYB1 569 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 RBM43Q6ZSC3 357 aaKnown RBP7.02□□□□□ -1.29
SCLT1-207ENST00000506233 CDC37L1Q7L3B6 337 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 CNTROBQ8N137 903 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 CLASRPQ8N2M8 674 aaKnown RBP7.02□□□□□ -1.29
SCLT1-207ENST00000506233 IGDCC4Q8TDY8 1250 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 DSCC1Q9BVC3 393 aa7.02□□□□□ -1.29
SCLT1-207ENST00000506233 RRAGDQ9NQL2 400 aaPredicted RBP7.02□□□□□ -1.29
SCLT1-207ENST00000506233 SEPT9Q9UHD8 586 aaPredicted RBP7.02□□□□□ -1.29
SCLT1-207ENST00000506233 CCDC85CA6NKD9 419 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 E7EWF7 191 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 PDE8AO60658 829 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 FAM13AO94988 1023 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 FGAP02671 866 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 RESTQ13127 1097 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 RASA3Q14644 834 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 ODR4Q5SWX8 454 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 NME8Q8N427 588 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 PGBD1Q96JS3 809 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 PDLIM2Q96JY6 352 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 C12orf49Q9H741 205 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 GSG1L2A8MUP6 293 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 WNT7AO00755 349 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 RANBP6O60518 1105 aaKnown RBP7.01□□□□□ -1.29
SCLT1-207ENST00000506233 GNA15P30679 374 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 ETFBP38117 255 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 ATP6V1AP38606 617 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 ORC1Q13415 861 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 MAP9Q49MG5 647 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 PGBD3Q8N328 593 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 NSUN7Q8NE18 718 aaKnown RBP7.01□□□□□ -1.29
SCLT1-207ENST00000506233 NEUROD4Q9HD90 331 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 GJB4Q9NTQ9 266 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 SNTG2Q9NY99 539 aa7.01□□□□□ -1.29
SCLT1-207ENST00000506233 REC8O95072 547 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 CASTP20810 708 aaKnown RBP7□□□□□ -1.29
SCLT1-207ENST00000506233 ZNF654Q8IZM8 581 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 STRBPQ96SI9 672 aaKnown RBP7□□□□□ -1.29
SCLT1-207ENST00000506233 BCL11AQ9H165 835 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 HELLSQ9NRZ9 838 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 MAGEC2Q9UBF1 373 aaPredicted RBP7□□□□□ -1.29
SCLT1-207ENST00000506233 V9GY48 417 aaPredicted RBP7□□□□□ -1.29
SCLT1-207ENST00000506233 GOLIM4O00461 696 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 NOVP48745 357 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 SNW1Q13573 536 aaKnown RBP7□□□□□ -1.29
SCLT1-207ENST00000506233 MCMDC2Q4G0Z9 681 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 GTF3C6Q969F1 213 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 MRFAP1L1Q96HT8 127 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 FAM84BQ96KN1 310 aaPredicted RBP7□□□□□ -1.29
SCLT1-207ENST00000506233 SRPK1Q96SB4 655 aaKnown RBP7□□□□□ -1.29
SCLT1-207ENST00000506233 TEX13AQ9BXU3 409 aaPredicted RBP7□□□□□ -1.29
SCLT1-207ENST00000506233 RBSNQ9H1K0 784 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 HSD3B7Q9H2F3 369 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 CHST12Q9NRB3 414 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 MINPP1Q9UNW1 487 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 ATAD5Q96QE3 1844 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 KIF28PB7ZC32 967 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 GYS1P13807 737 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 APLP1P51693 650 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 KLHL40Q2TBA0 621 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 PLEKHG4Q58EX7 1191 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 HSP90AB4PQ58FF6 505 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 MORN1Q5T089 497 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 CLEC4GQ6UXB4 293 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 FTOQ9C0B1 505 aaKnown RBP eCLIP7□□□□□ -1.29
SCLT1-207ENST00000506233 FANCLQ9NW38 375 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 PNMA2Q9UL42 364 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 AFF2P51816 1311 aa7□□□□□ -1.29
SCLT1-207ENST00000506233 PRKAB2O43741 272 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 BCAMP50895 628 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 FAM173BQ6P4H8 233 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 NARFQ9UHQ1 456 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 WDR90Q96KV7 1748 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 VEGFAP15692 232 aaPredicted RBP6.99□□□□□ -1.29
SCLT1-207ENST00000506233 CDC27P30260 824 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 PIP4K2BP78356 416 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 TKFCQ3LXA3 575 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 SLC39A13Q96H72 371 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 RPS6KC1Q96S38 1066 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 LRFN2Q9ULH4 789 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 MYH4Q9Y623 1939 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 SMCHD1A6NHR9 2005 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 OPLAHO14841 1288 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 RNF113AO15541 343 aaKnown RBP6.99□□□□□ -1.29
SCLT1-207ENST00000506233 RPS6KA4O75676 772 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 PDIA3P30101 505 aaKnown RBP6.99□□□□□ -1.29
SCLT1-207ENST00000506233 CHRNDQ07001 517 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 NFIXQ14938 502 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 SEC23AQ15436 765 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 ZSCAN23Q3MJ62 389 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 SH3TC2Q8TF17 1288 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 GGT7Q9UJ14 662 aa6.99□□□□□ -1.29
SCLT1-207ENST00000506233 LAMA2P24043 3122 aaKnown RBP6.99□□□□□ -1.29
SCLT1-207ENST00000506233 C19orf67A6NJJ6 358 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 POLRMTO00411 1230 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms