RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 SPATA20Q8TB22 786 aa19.35■□□□□ 0.69
LIN54-204ENST00000505397 ENOX1Q8TC92 643 aaKnown RBP19.35■□□□□ 0.69
LIN54-204ENST00000505397 ZKSCAN3Q9BRR0 538 aa19.35■□□□□ 0.69
LIN54-204ENST00000505397 PCDHB6Q9Y5E3 794 aa19.35■□□□□ 0.69
LIN54-204ENST00000505397 IGSF3O75054 1194 aa19.34■□□□□ 0.69
LIN54-204ENST00000505397 LDHBP07195 334 aaKnown RBP19.34■□□□□ 0.69
LIN54-204ENST00000505397 CRNKL1Q9BZJ0 848 aaKnown RBP19.34■□□□□ 0.69
LIN54-204ENST00000505397 AATFQ9NY61 560 aaKnown RBP eCLIP19.34■□□□□ 0.69
LIN54-204ENST00000505397 LRRN4CLQ8ND94 238 aa19.34■□□□□ 0.69
LIN54-204ENST00000505397 PODXL2Q9NZ53 605 aa19.34■□□□□ 0.69
LIN54-204ENST00000505397 SERTAD1Q9UHV2 236 aa19.34■□□□□ 0.69
LIN54-204ENST00000505397 FANCGO15287 622 aa19.33■□□□□ 0.69
LIN54-204ENST00000505397 POLR2DO15514 142 aaKnown RBP19.33■□□□□ 0.69
LIN54-204ENST00000505397 ARHGAP6O43182 974 aa19.33■□□□□ 0.69
LIN54-204ENST00000505397 ACTN4O43707 911 aaKnown RBP19.33■□□□□ 0.69
LIN54-204ENST00000505397 PRR29P0C7W0 189 aa19.33■□□□□ 0.69
LIN54-204ENST00000505397 GABPB1Q06547 395 aaPredicted RBP19.33■□□□□ 0.69
LIN54-204ENST00000505397 FMR1Q06787 632 aaKnown RBP eCLIP19.33■□□□□ 0.69
LIN54-204ENST00000505397 NR5A1Q13285 461 aa19.33■□□□□ 0.69
LIN54-204ENST00000505397 ZNF654Q8IZM8 581 aa19.33■□□□□ 0.69
LIN54-204ENST00000505397 ANAPC4Q9UJX5 808 aa19.33■□□□□ 0.69
LIN54-204ENST00000505397 DUOX1Q9NRD9 1551 aa19.33■□□□□ 0.69
LIN54-204ENST00000505397 ERICH2A1L162 156 aa19.33■□□□□ 0.68
LIN54-204ENST00000505397 PDE6BP35913 854 aa19.33■□□□□ 0.68
LIN54-204ENST00000505397 SEC23AQ15436 765 aa19.33■□□□□ 0.68
LIN54-204ENST00000505397 C6orf229H3BNL8 230 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 PPP2R5BQ15173 497 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 ERCC6LQ2NKX8 1250 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 MED15Q96RN5 788 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 DACH1Q9UI36 760 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 CEP131Q9UPN4 1083 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 KIF20AO95235 890 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 NPR1P16066 1061 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 MSL1Q68DK7 614 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 KANK3Q6NY19 840 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 POTEAQ6S8J7 498 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 HOMER1Q86YM7 354 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 OXER1Q8TDS5 423 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 SHISA4Q96DD7 197 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 RNF26Q9BY78 433 aaPredicted RBP19.32■□□□□ 0.68
LIN54-204ENST00000505397 CD209Q9NNX6 404 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 ZNF446Q9NWS9 450 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 DNAI1Q9UI46 699 aa19.32■□□□□ 0.68
LIN54-204ENST00000505397 GSTO1P78417 241 aa19.31■□□□□ 0.68
LIN54-204ENST00000505397 SP8Q8IXZ3 490 aa19.31■□□□□ 0.68
LIN54-204ENST00000505397 CMTR1Q8N1G2 835 aaKnown RBP19.31■□□□□ 0.68
LIN54-204ENST00000505397 TBC1D16Q8TBP0 767 aa19.31■□□□□ 0.68
LIN54-204ENST00000505397 SMARCE1Q969G3 411 aa19.31■□□□□ 0.68
LIN54-204ENST00000505397 RGS17Q9UGC6 210 aaPredicted RBP19.31■□□□□ 0.68
LIN54-204ENST00000505397 NFE2L3Q9Y4A8 694 aa19.31■□□□□ 0.68
LIN54-204ENST00000505397 ZSCAN12O43309 604 aa19.31■□□□□ 0.68
LIN54-204ENST00000505397 SRGNP10124 158 aa19.31■□□□□ 0.68
LIN54-204ENST00000505397 GOLGA8FQ08AF8 430 aa19.31■□□□□ 0.68
LIN54-204ENST00000505397 GOLGA8DPQ0D2H9 430 aa19.31■□□□□ 0.68
LIN54-204ENST00000505397 KRT222Q8N1A0 295 aa19.31■□□□□ 0.68
LIN54-204ENST00000505397 TMX4Q9H1E5 349 aaPredicted RBP19.31■□□□□ 0.68
LIN54-204ENST00000505397 LAMB1P07942 1786 aa19.31■□□□□ 0.68
LIN54-204ENST00000505397 VWA3AA6NCI4 1184 aa19.31■□□□□ 0.68
LIN54-204ENST00000505397 ALDH1B1P30837 517 aa19.31■□□□□ 0.68
LIN54-204ENST00000505397 LTBP1Q14766 1721 aa19.3■□□□□ 0.68
LIN54-204ENST00000505397 STX10O60499 249 aa19.3■□□□□ 0.68
LIN54-204ENST00000505397 TC2NQ8N9U0 490 aa19.3■□□□□ 0.68
LIN54-204ENST00000505397 ESR2Q92731 530 aa19.3■□□□□ 0.68
LIN54-204ENST00000505397 SRRTQ9BXP5 876 aaKnown RBP19.3■□□□□ 0.68
LIN54-204ENST00000505397 ATP8A2Q9NTI2 1148 aa19.3■□□□□ 0.68
LIN54-204ENST00000505397 POLLQ9UGP5 575 aa19.3■□□□□ 0.68
LIN54-204ENST00000505397 PPP2R2CQ9Y2T4 447 aa19.3■□□□□ 0.68
LIN54-204ENST00000505397 ATP6V0A2Q9Y487 856 aa19.3■□□□□ 0.68
LIN54-204ENST00000505397 COL11A2P13942 1736 aaPredicted RBP19.3■□□□□ 0.68
LIN54-204ENST00000505397 FUT2Q10981 343 aa19.3■□□□□ 0.68
LIN54-204ENST00000505397 PTPN21Q16825 1174 aa19.3■□□□□ 0.68
LIN54-204ENST00000505397 CT47A1Q5JQC4 288 aaPredicted RBP19.3■□□□□ 0.68
LIN54-204ENST00000505397 SPECC1LQ69YQ0 1117 aa19.3■□□□□ 0.68
LIN54-204ENST00000505397 CCDC82Q8N4S0 544 aa19.3■□□□□ 0.68
LIN54-204ENST00000505397 UBAC1Q9BSL1 405 aa19.3■□□□□ 0.68
LIN54-204ENST00000505397 CSRNP2Q9H175 543 aa19.3■□□□□ 0.68
LIN54-204ENST00000505397 MYH2Q9UKX2 1941 aa19.29■□□□□ 0.68
LIN54-204ENST00000505397 IL1R1P14778 569 aa19.29■□□□□ 0.68
LIN54-204ENST00000505397 ERCC5P28715 1186 aaPredicted RBP19.29■□□□□ 0.68
LIN54-204ENST00000505397 PKN1Q16512 942 aa19.29■□□□□ 0.68
LIN54-204ENST00000505397 USP49Q70CQ1 688 aa19.29■□□□□ 0.68
LIN54-204ENST00000505397 BAG1Q99933 345 aaPredicted RBP19.29■□□□□ 0.68
LIN54-204ENST00000505397 CABP5Q9NP86 173 aa19.29■□□□□ 0.68
LIN54-204ENST00000505397 NR1I3Q14994 352 aa19.29■□□□□ 0.68
LIN54-204ENST00000505397 ZHX1Q9UKY1 873 aaPredicted RBP19.29■□□□□ 0.68
LIN54-204ENST00000505397 TNKSO95271 1327 aa19.28■□□□□ 0.68
LIN54-204ENST00000505397 LDHCP07864 332 aa19.28■□□□□ 0.68
LIN54-204ENST00000505397 PCP11498 1178 aaKnown RBP19.28■□□□□ 0.68
LIN54-204ENST00000505397 PLCD1P51178 756 aa19.28■□□□□ 0.68
LIN54-204ENST00000505397 GRAMD1CQ8IYS0 662 aa19.28■□□□□ 0.68
LIN54-204ENST00000505397 NUP133Q8WUM0 1156 aa19.28■□□□□ 0.68
LIN54-204ENST00000505397 PHF20Q9BVI0 1012 aa19.28■□□□□ 0.68
LIN54-204ENST00000505397 BAG3O95817 575 aa19.28■□□□□ 0.68
LIN54-204ENST00000505397 CTR9Q6PD62 1173 aa19.28■□□□□ 0.68
LIN54-204ENST00000505397 SH3RF1Q7Z6J0 888 aa19.28■□□□□ 0.68
LIN54-204ENST00000505397 MASTLQ96GX5 879 aa19.28■□□□□ 0.68
LIN54-204ENST00000505397 DCP1AQ9NPI6 582 aaPredicted RBP19.28■□□□□ 0.68
LIN54-204ENST00000505397 STK32BQ9NY57 414 aa19.28■□□□□ 0.68
LIN54-204ENST00000505397 ARPP21Q9UBL0 812 aaPredicted RBP19.28■□□□□ 0.68
LIN54-204ENST00000505397 MYH6P13533 1939 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms