RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 TBC1D2Q9BYX2 928 aa20.06■□□□□ 0.8
SYNE4-207ENST00000505054 PLXNB2O15031 1838 aa20.05■□□□□ 0.8
SYNE4-207ENST00000505054 USP17L5A8MUK1 530 aa20.05■□□□□ 0.8
SYNE4-207ENST00000505054 SGSM2O43147 1006 aa20.05■□□□□ 0.8
SYNE4-207ENST00000505054 AKR1B1P15121 316 aa20.05■□□□□ 0.8
SYNE4-207ENST00000505054 GUCY1A2P33402 732 aa20.05■□□□□ 0.8
SYNE4-207ENST00000505054 RUFY2Q8WXA3 655 aa20.05■□□□□ 0.8
SYNE4-207ENST00000505054 DEFB118Q96PH6 123 aa20.05■□□□□ 0.8
SYNE4-207ENST00000505054 A0A1W2PPC1 479 aa20.04■□□□□ 0.8
SYNE4-207ENST00000505054 EVI5O60447 810 aa20.04■□□□□ 0.8
SYNE4-207ENST00000505054 WDR18Q9BV38 432 aa20.04■□□□□ 0.8
SYNE4-207ENST00000505054 DSCC1Q9BVC3 393 aa20.04■□□□□ 0.8
SYNE4-207ENST00000505054 CRISPLD2Q9H0B8 497 aa20.04■□□□□ 0.8
SYNE4-207ENST00000505054 ANAPC4Q9UJX5 808 aa20.04■□□□□ 0.8
SYNE4-207ENST00000505054 PRDM1O75626 825 aa20.03■□□□□ 0.8
SYNE4-207ENST00000505054 TFRCP02786 760 aaKnown RBP20.03■□□□□ 0.8
SYNE4-207ENST00000505054 RASA1P20936 1047 aa20.03■□□□□ 0.8
SYNE4-207ENST00000505054 GCLCP48506 637 aaPredicted RBP20.03■□□□□ 0.8
SYNE4-207ENST00000505054 CTDSPL2Q05D32 466 aa20.03■□□□□ 0.8
SYNE4-207ENST00000505054 SPP2Q13103 211 aa20.03■□□□□ 0.8
SYNE4-207ENST00000505054 PABPC4Q13310 644 aaKnown RBP eCLIP20.03■□□□□ 0.8
SYNE4-207ENST00000505054 ZNF280CQ8ND82 737 aa20.03■□□□□ 0.8
SYNE4-207ENST00000505054 CABP5Q9NP86 173 aa20.03■□□□□ 0.8
SYNE4-207ENST00000505054 TACC3Q9Y6A5 838 aa20.03■□□□□ 0.8
SYNE4-207ENST00000505054 MPHOSPH10O00566 681 aaKnown RBP20.02■□□□□ 0.8
SYNE4-207ENST00000505054 SEPT2Q15019 361 aa20.02■□□□□ 0.8
SYNE4-207ENST00000505054 RAB3GAP1Q15042 981 aa20.02■□□□□ 0.8
SYNE4-207ENST00000505054 CCDC17Q96LX7 622 aa20.02■□□□□ 0.8
SYNE4-207ENST00000505054 NBPF3Q9H094 633 aa20.02■□□□□ 0.8
SYNE4-207ENST00000505054 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.02■□□□□ 0.8
SYNE4-207ENST00000505054 AS3MTQ9HBK9 375 aa20.02■□□□□ 0.8
SYNE4-207ENST00000505054 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.02■□□□□ 0.8
SYNE4-207ENST00000505054 HMGCRP04035 888 aa20.01■□□□□ 0.79
SYNE4-207ENST00000505054 HMGCS2P54868 508 aa20.01■□□□□ 0.79
SYNE4-207ENST00000505054 HAND2P61296 217 aa20.01■□□□□ 0.79
SYNE4-207ENST00000505054 PTH1RQ03431 593 aa20.01■□□□□ 0.79
SYNE4-207ENST00000505054 TMEM179Q6ZVK1 233 aa20.01■□□□□ 0.79
SYNE4-207ENST00000505054 CLEC10AQ8IUN9 316 aa20.01■□□□□ 0.79
SYNE4-207ENST00000505054 ESYT1Q9BSJ8 1104 aa20.01■□□□□ 0.79
SYNE4-207ENST00000505054 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.01■□□□□ 0.79
SYNE4-207ENST00000505054 MKNK2Q9HBH9 465 aa20.01■□□□□ 0.79
SYNE4-207ENST00000505054 INCENPQ9NQS7 918 aa20.01■□□□□ 0.79
SYNE4-207ENST00000505054 CDC45O75419 566 aa20■□□□□ 0.79
SYNE4-207ENST00000505054 SLC3A2P08195 630 aaKnown RBP20■□□□□ 0.79
SYNE4-207ENST00000505054 MTMR2Q13614 643 aa20■□□□□ 0.79
SYNE4-207ENST00000505054 SH3D19Q5HYK7 790 aa20■□□□□ 0.79
SYNE4-207ENST00000505054 ANKLE1Q8NAG6 615 aa20■□□□□ 0.79
SYNE4-207ENST00000505054 BACE1P56817 501 aa19.99■□□□□ 0.79
SYNE4-207ENST00000505054 PDE4BQ07343 736 aa19.99■□□□□ 0.79
SYNE4-207ENST00000505054 NECAB2Q7Z6G3 386 aa19.99■□□□□ 0.79
SYNE4-207ENST00000505054 TBC1D10CQ8IV04 446 aa19.99■□□□□ 0.79
SYNE4-207ENST00000505054 ACER1Q8TDN7 264 aa19.99■□□□□ 0.79
SYNE4-207ENST00000505054 PAWRQ96IZ0 340 aaKnown RBP19.99■□□□□ 0.79
SYNE4-207ENST00000505054 ASCC2Q9H1I8 757 aaPredicted RBP19.99■□□□□ 0.79
SYNE4-207ENST00000505054 ZNF287Q9HBT7 754 aa19.99■□□□□ 0.79
SYNE4-207ENST00000505054 MYH8P13535 1937 aa19.99■□□□□ 0.79
SYNE4-207ENST00000505054 GREB1LQ9C091 1923 aaPredicted RBP19.99■□□□□ 0.79
SYNE4-207ENST00000505054 LAMA4Q16363 1823 aa19.98■□□□□ 0.79
SYNE4-207ENST00000505054 FGRP09769 529 aa19.98■□□□□ 0.79
SYNE4-207ENST00000505054 SIAH1Q8IUQ4 282 aa19.98■□□□□ 0.79
SYNE4-207ENST00000505054 DIS3LQ8TF46 1054 aaKnown RBP19.98■□□□□ 0.79
SYNE4-207ENST00000505054 MORF4L1Q9UBU8 362 aa19.98■□□□□ 0.79
SYNE4-207ENST00000505054 PLIN4Q96Q06 1357 aa19.97■□□□□ 0.79
SYNE4-207ENST00000505054 LAMA3Q16787 3333 aa19.97■□□□□ 0.79
SYNE4-207ENST00000505054 A0A1W2PRG0 241 aa19.97■□□□□ 0.79
SYNE4-207ENST00000505054 USP17L10C9JJH3 530 aa19.97■□□□□ 0.79
SYNE4-207ENST00000505054 ORC4O43929 436 aa19.97■□□□□ 0.79
SYNE4-207ENST00000505054 ICA1Q05084 483 aa19.97■□□□□ 0.79
SYNE4-207ENST00000505054 RPTORQ8N122 1335 aa19.97■□□□□ 0.79
SYNE4-207ENST00000505054 IGKV6D-41A0A0C4DH26 115 aa19.96■□□□□ 0.79
SYNE4-207ENST00000505054 FAM47AQ5JRC9 791 aa19.96■□□□□ 0.79
SYNE4-207ENST00000505054 ZNF444Q8N0Y2 327 aaPredicted RBP19.96■□□□□ 0.79
SYNE4-207ENST00000505054 STAG1Q8WVM7 1258 aa19.96■□□□□ 0.79
SYNE4-207ENST00000505054 LSG1Q9H089 658 aaKnown RBP19.96■□□□□ 0.79
SYNE4-207ENST00000505054 KIAA1683Q9H0B3 1180 aa19.96■□□□□ 0.79
SYNE4-207ENST00000505054 CTNNA3Q9UI47 895 aa19.96■□□□□ 0.79
SYNE4-207ENST00000505054 GJD2Q9UKL4 321 aa19.96■□□□□ 0.79
SYNE4-207ENST00000505054 FRMPD3Q5JV73 1810 aa19.95■□□□□ 0.78
SYNE4-207ENST00000505054 C19orf81C9J6K1 198 aa19.95■□□□□ 0.78
SYNE4-207ENST00000505054 ZNF213O14771 459 aa19.95■□□□□ 0.78
SYNE4-207ENST00000505054 IRX3P78415 501 aaPredicted RBP19.95■□□□□ 0.78
SYNE4-207ENST00000505054 AKNAD1Q5T1N1 836 aa19.95■□□□□ 0.78
SYNE4-207ENST00000505054 NEDD1Q8NHV4 660 aa19.95■□□□□ 0.78
SYNE4-207ENST00000505054 MAP4K1Q92918 833 aa19.95■□□□□ 0.78
SYNE4-207ENST00000505054 FEZ1Q99689 392 aa19.95■□□□□ 0.78
SYNE4-207ENST00000505054 KANSL2Q9H9L4 492 aa19.95■□□□□ 0.78
SYNE4-207ENST00000505054 HMX1Q9NP08 348 aaPredicted RBP19.95■□□□□ 0.78
SYNE4-207ENST00000505054 EMILIN3Q9NT22 766 aa19.95■□□□□ 0.78
SYNE4-207ENST00000505054 U3KPZ7 1027 aaPredicted RBP19.95■□□□□ 0.78
SYNE4-207ENST00000505054 NEDD4P46934 1319 aa19.95■□□□□ 0.78
SYNE4-207ENST00000505054 SOX1O00570 391 aaPredicted RBP19.94■□□□□ 0.78
SYNE4-207ENST00000505054 TSPY3P0CV98 308 aa19.94■□□□□ 0.78
SYNE4-207ENST00000505054 TSPY8P0CW00 308 aa19.94■□□□□ 0.78
SYNE4-207ENST00000505054 TFAP4Q01664 338 aa19.94■□□□□ 0.78
SYNE4-207ENST00000505054 ZYXQ15942 572 aaKnown RBP19.94■□□□□ 0.78
SYNE4-207ENST00000505054 IMMTQ16891 758 aaKnown RBP19.94■□□□□ 0.78
SYNE4-207ENST00000505054 USP17L2Q6R6M4 530 aa19.94■□□□□ 0.78
SYNE4-207ENST00000505054 CASC1Q6TDU7 716 aa19.94■□□□□ 0.78
SYNE4-207ENST00000505054 SOCS4Q8WXH5 440 aa19.94■□□□□ 0.78
SYNE4-207ENST00000505054 TRIB2Q92519 343 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms