RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 KIAA1755Q5JYT7 1200 aa30.31■■■□□ 2.44
PVT1-201ENST00000504719 IFNL3Q8IZI9 196 aa30.31■■■□□ 2.44
PVT1-201ENST00000504719 EVI5LQ96CN4 794 aa30.31■■■□□ 2.44
PVT1-201ENST00000504719 PORCNQ9H237 461 aa30.31■■■□□ 2.44
PVT1-201ENST00000504719 SH2D4AQ9H788 454 aa30.31■■■□□ 2.44
PVT1-201ENST00000504719 MKI67P46013 3256 aaKnown RBP30.31■■■□□ 2.44
PVT1-201ENST00000504719 SPDYE16A6NNV3 312 aaPredicted RBP30.3■■■□□ 2.44
PVT1-201ENST00000504719 GJB1P08034 283 aa30.3■■■□□ 2.44
PVT1-201ENST00000504719 UNC93B1Q9H1C4 597 aa30.3■■■□□ 2.44
PVT1-201ENST00000504719 KANSL2Q9H9L4 492 aa30.3■■■□□ 2.44
PVT1-201ENST00000504719 STK11IPQ8N1F8 1099 aa30.29■■■□□ 2.44
PVT1-201ENST00000504719 NKX2-3Q8TAU0 364 aa30.29■■■□□ 2.44
PVT1-201ENST00000504719 LPAR1Q92633 364 aa30.29■■■□□ 2.44
PVT1-201ENST00000504719 SHISA4Q96DD7 197 aa30.29■■■□□ 2.44
PVT1-201ENST00000504719 VCPKMTQ9H867 229 aa30.29■■■□□ 2.44
PVT1-201ENST00000504719 EEF2P13639 858 aaKnown RBP30.28■■■□□ 2.44
PVT1-201ENST00000504719 RASA1P20936 1047 aa30.28■■■□□ 2.44
PVT1-201ENST00000504719 GJA8P48165 433 aa30.28■■■□□ 2.44
PVT1-201ENST00000504719 COG2Q14746 738 aa30.28■■■□□ 2.44
PVT1-201ENST00000504719 GPR142Q7Z601 462 aa30.28■■■□□ 2.44
PVT1-201ENST00000504719 CCAR1Q8IX12 1150 aaKnown RBP30.28■■■□□ 2.44
PVT1-201ENST00000504719 NUDT12Q9BQG2 462 aa30.28■■■□□ 2.44
PVT1-201ENST00000504719 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.28■■■□□ 2.44
PVT1-201ENST00000504719 MKNK2Q9HBH9 465 aa30.28■■■□□ 2.44
PVT1-201ENST00000504719 BTBD7Q9P203 1132 aa30.28■■■□□ 2.44
PVT1-201ENST00000504719 PARP14Q460N5 1801 aa30.27■■■□□ 2.44
PVT1-201ENST00000504719 CCNA1P78396 465 aa30.27■■■□□ 2.44
PVT1-201ENST00000504719 PLEKHH3Q7Z736 793 aa30.27■■■□□ 2.44
PVT1-201ENST00000504719 SOCS4Q8WXH5 440 aa30.27■■■□□ 2.44
PVT1-201ENST00000504719 NACAP1Q9BZK3 213 aa30.27■■■□□ 2.44
PVT1-201ENST00000504719 HOXC10Q9NYD6 342 aa30.27■■■□□ 2.44
PVT1-201ENST00000504719 TANGO6Q9C0B7 1094 aa30.26■■■□□ 2.43
PVT1-201ENST00000504719 A0A0G2JMZ2 1700 aa30.25■■■□□ 2.43
PVT1-201ENST00000504719 HMGCRP04035 888 aa30.25■■■□□ 2.43
PVT1-201ENST00000504719 CYP2B6P20813 491 aa30.25■■■□□ 2.43
PVT1-201ENST00000504719 ATP2B2Q01814 1243 aa30.25■■■□□ 2.43
PVT1-201ENST00000504719 PRPF38BQ5VTL8 546 aaKnown RBP30.25■■■□□ 2.43
PVT1-201ENST00000504719 SPICE1Q8N0Z3 855 aa30.25■■■□□ 2.43
PVT1-201ENST00000504719 USP6NLQ92738 828 aa30.25■■■□□ 2.43
PVT1-201ENST00000504719 CENPBP07199 599 aaPredicted RBP30.24■■■□□ 2.43
PVT1-201ENST00000504719 XRCC5P13010 732 aaKnown RBP30.24■■■□□ 2.43
PVT1-201ENST00000504719 DSG3P32926 999 aa30.24■■■□□ 2.43
PVT1-201ENST00000504719 MORN1Q5T089 497 aa30.24■■■□□ 2.43
PVT1-201ENST00000504719 CCDC129Q6ZRS4 1044 aa30.24■■■□□ 2.43
PVT1-201ENST00000504719 U2AF1L4Q8WU68 220 aaKnown RBP30.24■■■□□ 2.43
PVT1-201ENST00000504719 NAPBQ9H115 298 aa30.24■■■□□ 2.43
PVT1-201ENST00000504719 WDR46O15213 610 aaKnown RBP30.23■■■□□ 2.43
PVT1-201ENST00000504719 TICAM2Q86XR7 235 aa30.23■■■□□ 2.43
PVT1-201ENST00000504719 TRIB2Q92519 343 aa30.23■■■□□ 2.43
PVT1-201ENST00000504719 ZNF287Q9HBT7 754 aa30.23■■■□□ 2.43
PVT1-201ENST00000504719 MYH4Q9Y623 1939 aa30.22■■■□□ 2.43
PVT1-201ENST00000504719 SGPL1O95470 568 aa30.22■■■□□ 2.43
PVT1-201ENST00000504719 PLEKHM2Q8IWE5 1019 aa30.22■■■□□ 2.43
PVT1-201ENST00000504719 ZNF444Q8N0Y2 327 aaPredicted RBP30.22■■■□□ 2.43
PVT1-201ENST00000504719 CWC22Q9HCG8 908 aaKnown RBP30.22■■■□□ 2.43
PVT1-201ENST00000504719 PAK6Q9NQU5 681 aaPredicted RBP30.22■■■□□ 2.43
PVT1-201ENST00000504719 HELLSQ9NRZ9 838 aa30.22■■■□□ 2.43
PVT1-201ENST00000504719 FOXP2O15409 715 aa30.21■■■□□ 2.43
PVT1-201ENST00000504719 PRDM1O75626 825 aa30.21■■■□□ 2.43
PVT1-201ENST00000504719 FLOT1O75955 427 aa30.21■■■□□ 2.43
PVT1-201ENST00000504719 RGS2P41220 211 aa30.21■■■□□ 2.43
PVT1-201ENST00000504719 TRIM32Q13049 653 aa30.21■■■□□ 2.43
PVT1-201ENST00000504719 GOPCQ9HD26 462 aa30.21■■■□□ 2.43
PVT1-201ENST00000504719 NYAP2Q9P242 653 aa30.21■■■□□ 2.43
PVT1-201ENST00000504719 IGKV6D-41A0A0C4DH26 115 aa30.2■■■□□ 2.43
PVT1-201ENST00000504719 PPARAQ07869 468 aa30.2■■■□□ 2.43
PVT1-201ENST00000504719 TRMT44Q8IYL2 757 aaKnown RBP30.2■■■□□ 2.43
PVT1-201ENST00000504719 PTPREP23469 700 aa30.19■■■□□ 2.42
PVT1-201ENST00000504719 WDR78Q5VTH9 848 aa30.19■■■□□ 2.42
PVT1-201ENST00000504719 MB21D1Q8N884 522 aa30.19■■■□□ 2.42
PVT1-201ENST00000504719 DEFB118Q96PH6 123 aa30.19■■■□□ 2.42
PVT1-201ENST00000504719 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.19■■■□□ 2.424e-6■■■□□ 17.4
PVT1-201ENST00000504719 OSBPL3Q9H4L5 887 aa30.19■■■□□ 2.42
PVT1-201ENST00000504719 COL11A1P12107 1806 aaPredicted RBP30.19■■■□□ 2.42
PVT1-201ENST00000504719 SLC15A5A6NIM6 579 aa30.18■■■□□ 2.42
PVT1-201ENST00000504719 TRIM6-TRIM34B2RNG4 842 aa30.18■■■□□ 2.42
PVT1-201ENST00000504719 CAPN2P17655 700 aa30.18■■■□□ 2.42
PVT1-201ENST00000504719 PDE4BQ07343 736 aa30.18■■■□□ 2.42
PVT1-201ENST00000504719 MAP2K5Q13163 448 aa30.18■■■□□ 2.42
PVT1-201ENST00000504719 UBE2Q1Q7Z7E8 422 aa30.18■■■□□ 2.42
PVT1-201ENST00000504719 ATG4CQ96DT6 458 aa30.18■■■□□ 2.42
PVT1-201ENST00000504719 APBA2Q99767 749 aa30.18■■■□□ 2.42
PVT1-201ENST00000504719 MOV10L1Q9BXT6 1211 aaKnown RBP30.18■■■□□ 2.42
PVT1-201ENST00000504719 SPATC1LQ9H0A9 340 aa30.18■■■□□ 2.42
PVT1-201ENST00000504719 RPTORQ8N122 1335 aa30.18■■■□□ 2.42
PVT1-201ENST00000504719 SLC3A2P08195 630 aaKnown RBP30.17■■■□□ 2.42
PVT1-201ENST00000504719 VPS53Q5VIR6 699 aa30.17■■■□□ 2.42
PVT1-201ENST00000504719 FAM227BQ96M60 508 aa30.17■■■□□ 2.42
PVT1-201ENST00000504719 HMX1Q9NP08 348 aaPredicted RBP30.17■■■□□ 2.42
PVT1-201ENST00000504719 A0A0D9SFI3 127 aa30.16■■■□□ 2.42
PVT1-201ENST00000504719 ZKSCAN1P17029 563 aaPredicted RBP30.16■■■□□ 2.42
PVT1-201ENST00000504719 PDE4AP27815 886 aa30.16■■■□□ 2.42
PVT1-201ENST00000504719 MCMDC2Q4G0Z9 681 aa30.16■■■□□ 2.42
PVT1-201ENST00000504719 MAP3K21Q5TCX8 1036 aa30.16■■■□□ 2.42
PVT1-201ENST00000504719 RILPL2Q969X0 211 aa30.16■■■□□ 2.42
PVT1-201ENST00000504719 CRISPLD2Q9H0B8 497 aa30.16■■■□□ 2.42
PVT1-201ENST00000504719 ADAMTS5Q9UNA0 930 aa30.16■■■□□ 2.42
PVT1-201ENST00000504719 IVNS1ABPQ9Y6Y0 642 aa30.16■■■□□ 2.42
PVT1-201ENST00000504719 RAD21O60216 631 aa30.15■■■□□ 2.42
PVT1-201ENST00000504719 TFRCP02786 760 aaKnown RBP30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms