RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 VPS53Q5VIR6 699 aa25.19■■□□□ 1.62
TRAPPC11-203ENST00000504526 SLAIN1Q8ND83 568 aa25.19■■□□□ 1.62
TRAPPC11-203ENST00000504526 GOPCQ9HD26 462 aa25.19■■□□□ 1.62
TRAPPC11-203ENST00000504526 TXNRD2Q9NNW7 524 aa25.19■■□□□ 1.62
TRAPPC11-203ENST00000504526 DIAPH3Q9NSV4 1193 aa25.19■■□□□ 1.62
TRAPPC11-203ENST00000504526 HOXC10Q9NYD6 342 aa25.19■■□□□ 1.62
TRAPPC11-203ENST00000504526 NYAP2Q9P242 653 aa25.19■■□□□ 1.62
TRAPPC11-203ENST00000504526 ANAPC4Q9UJX5 808 aa25.19■■□□□ 1.62
TRAPPC11-203ENST00000504526 WDR46O15213 610 aaKnown RBP25.18■■□□□ 1.62
TRAPPC11-203ENST00000504526 FLT3LGP49771 235 aa25.18■■□□□ 1.62
TRAPPC11-203ENST00000504526 MLLT1Q03111 559 aaPredicted RBP25.18■■□□□ 1.62
TRAPPC11-203ENST00000504526 COG2Q14746 738 aa25.18■■□□□ 1.62
TRAPPC11-203ENST00000504526 CCAR1Q8IX12 1150 aaKnown RBP25.18■■□□□ 1.62
TRAPPC11-203ENST00000504526 SH3TC2Q8TF17 1288 aa25.18■■□□□ 1.62
TRAPPC11-203ENST00000504526 PAGR1Q9BTK6 254 aa25.18■■□□□ 1.62
TRAPPC11-203ENST00000504526 TMEM106CQ9BVX2 250 aa25.18■■□□□ 1.62
TRAPPC11-203ENST00000504526 TANGO6Q9C0B7 1094 aa25.18■■□□□ 1.62
TRAPPC11-203ENST00000504526 GABRQQ9UN88 632 aa25.18■■□□□ 1.62
TRAPPC11-203ENST00000504526 ZMYM6O95789 1325 aa25.17■■□□□ 1.62
TRAPPC11-203ENST00000504526 PRDM1O75626 825 aa25.17■■□□□ 1.62
TRAPPC11-203ENST00000504526 HSPD1P10809 573 aaKnown RBP25.17■■□□□ 1.62
TRAPPC11-203ENST00000504526 MAPK4P31152 587 aa25.17■■□□□ 1.62
TRAPPC11-203ENST00000504526 CCNA1P78396 465 aa25.17■■□□□ 1.62
TRAPPC11-203ENST00000504526 TTC22Q5TAA0 569 aa25.17■■□□□ 1.62
TRAPPC11-203ENST00000504526 ZNF589Q86UQ0 364 aaPredicted RBP25.17■■□□□ 1.62
TRAPPC11-203ENST00000504526 GREB1LQ9C091 1923 aaPredicted RBP25.17■■□□□ 1.62
TRAPPC11-203ENST00000504526 PLIN4Q96Q06 1357 aa25.17■■□□□ 1.62
TRAPPC11-203ENST00000504526 IGKV6D-41A0A0C4DH26 115 aa25.16■■□□□ 1.62
TRAPPC11-203ENST00000504526 SPDYE16A6NNV3 312 aaPredicted RBP25.16■■□□□ 1.62
TRAPPC11-203ENST00000504526 NEDD1Q8NHV4 660 aa25.16■■□□□ 1.62
TRAPPC11-203ENST00000504526 PXYLP1Q8TE99 480 aa25.16■■□□□ 1.62
TRAPPC11-203ENST00000504526 SYNPO2Q9UMS6 1093 aa25.16■■□□□ 1.62
TRAPPC11-203ENST00000504526 FGAP02671 866 aa25.15■■□□□ 1.62
TRAPPC11-203ENST00000504526 TSPY3P0CV98 308 aa25.15■■□□□ 1.62
TRAPPC11-203ENST00000504526 TSPY8P0CW00 308 aa25.15■■□□□ 1.62
TRAPPC11-203ENST00000504526 Q3C1V9 767 aa25.15■■□□□ 1.62
TRAPPC11-203ENST00000504526 KIAA1755Q5JYT7 1200 aa25.15■■□□□ 1.62
TRAPPC11-203ENST00000504526 PPP4R3BQ5MIZ7 849 aa25.15■■□□□ 1.62
TRAPPC11-203ENST00000504526 SPICE1Q8N0Z3 855 aa25.15■■□□□ 1.62
TRAPPC11-203ENST00000504526 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.15■■□□□ 1.62
TRAPPC11-203ENST00000504526 ADCY3O60266 1144 aa25.14■■□□□ 1.62
TRAPPC11-203ENST00000504526 UBXN2AP68543 259 aa25.14■■□□□ 1.62
TRAPPC11-203ENST00000504526 POTEEQ6S8J3 1075 aa25.14■■□□□ 1.62
TRAPPC11-203ENST00000504526 CWC27Q6UX04 472 aaKnown RBP25.14■■□□□ 1.62
TRAPPC11-203ENST00000504526 MB21D1Q8N884 522 aa25.14■■□□□ 1.62
TRAPPC11-203ENST00000504526 SOCS4Q8WXH5 440 aa25.14■■□□□ 1.62
TRAPPC11-203ENST00000504526 MTMR4Q9NYA4 1195 aa25.14■■□□□ 1.62
TRAPPC11-203ENST00000504526 HTTP42858 3142 aa25.14■■□□□ 1.61
TRAPPC11-203ENST00000504526 CNMDO75829 334 aa25.13■■□□□ 1.61
TRAPPC11-203ENST00000504526 TFAP4Q01664 338 aa25.13■■□□□ 1.61
TRAPPC11-203ENST00000504526 CTDSPL2Q05D32 466 aa25.13■■□□□ 1.61
TRAPPC11-203ENST00000504526 MKL1Q969V6 931 aa25.13■■□□□ 1.61
TRAPPC11-203ENST00000504526 BIN2Q9UBW5 565 aaPredicted RBP25.13■■□□□ 1.61
TRAPPC11-203ENST00000504526 CLIP2Q9UDT6 1046 aa25.13■■□□□ 1.61
TRAPPC11-203ENST00000504526 PEX10O60683 326 aa25.12■■□□□ 1.61
TRAPPC11-203ENST00000504526 FLOT1O75955 427 aa25.12■■□□□ 1.61
TRAPPC11-203ENST00000504526 TTLL1O95922 423 aa25.12■■□□□ 1.61
TRAPPC11-203ENST00000504526 DSG3P32926 999 aa25.12■■□□□ 1.61
TRAPPC11-203ENST00000504526 CEP95Q96GE4 821 aa25.12■■□□□ 1.61
TRAPPC11-203ENST00000504526 NUDT12Q9BQG2 462 aa25.12■■□□□ 1.61
TRAPPC11-203ENST00000504526 CWC22Q9HCG8 908 aaKnown RBP25.12■■□□□ 1.61
TRAPPC11-203ENST00000504526 GJD2Q9UKL4 321 aa25.12■■□□□ 1.61
TRAPPC11-203ENST00000504526 TSPY2A6NKD2 308 aa25.11■■□□□ 1.61
TRAPPC11-203ENST00000504526 ORC4O43929 436 aa25.11■■□□□ 1.61
TRAPPC11-203ENST00000504526 RAD21O60216 631 aa25.11■■□□□ 1.61
TRAPPC11-203ENST00000504526 FGRP09769 529 aa25.11■■□□□ 1.61
TRAPPC11-203ENST00000504526 GSPT1P15170 499 aaKnown RBP25.11■■□□□ 1.61
TRAPPC11-203ENST00000504526 FAM47AQ5JRC9 791 aa25.11■■□□□ 1.61
TRAPPC11-203ENST00000504526 PLEKHH3Q7Z736 793 aa25.11■■□□□ 1.61
TRAPPC11-203ENST00000504526 PORCNQ9H237 461 aa25.11■■□□□ 1.61
TRAPPC11-203ENST00000504526 BTBD7Q9P203 1132 aa25.11■■□□□ 1.61
TRAPPC11-203ENST00000504526 POTEFA5A3E0 1075 aa25.1■■□□□ 1.61
TRAPPC11-203ENST00000504526 F5H6K3 240 aa25.1■■□□□ 1.61
TRAPPC11-203ENST00000504526 PCP11498 1178 aaKnown RBP25.1■■□□□ 1.61
TRAPPC11-203ENST00000504526 KLRC3Q07444 240 aa25.1■■□□□ 1.61
TRAPPC11-203ENST00000504526 GPR142Q7Z601 462 aa25.1■■□□□ 1.61
TRAPPC11-203ENST00000504526 RBBP6Q7Z6E9 1792 aaKnown RBP25.09■■□□□ 1.61
TRAPPC11-203ENST00000504526 RANBP6O60518 1105 aaKnown RBP25.08■■□□□ 1.61
TRAPPC11-203ENST00000504526 NDUFB10O96000 172 aa25.08■■□□□ 1.61
TRAPPC11-203ENST00000504526 XRCC5P13010 732 aaKnown RBP25.08■■□□□ 1.61
TRAPPC11-203ENST00000504526 ELNP15502 786 aa25.08■■□□□ 1.61
TRAPPC11-203ENST00000504526 FAM83BQ5T0W9 1011 aa25.08■■□□□ 1.61
TRAPPC11-203ENST00000504526 CENPQQ7L2Z9 268 aaPredicted RBP25.08■■□□□ 1.61
TRAPPC11-203ENST00000504526 TRMT44Q8IYL2 757 aaKnown RBP25.08■■□□□ 1.61
TRAPPC11-203ENST00000504526 GMCL1P1Q8NEA9 526 aa25.08■■□□□ 1.61
TRAPPC11-203ENST00000504526 DSCC1Q9BVC3 393 aa25.08■■□□□ 1.61
TRAPPC11-203ENST00000504526 RNF41Q9H4P4 317 aaPredicted RBP25.08■■□□□ 1.61
TRAPPC11-203ENST00000504526 RAD50Q92878 1312 aa25.08■■□□□ 1.6
TRAPPC11-203ENST00000504526 MYCP01106 439 aaPredicted RBP25.07■■□□□ 1.6
TRAPPC11-203ENST00000504526 NT5C2P49902 561 aa25.07■■□□□ 1.6
TRAPPC11-203ENST00000504526 SHCBP1Q8NEM2 672 aa25.07■■□□□ 1.6
TRAPPC11-203ENST00000504526 RUFY2Q8WXA3 655 aa25.07■■□□□ 1.6
TRAPPC11-203ENST00000504526 ATG4CQ96DT6 458 aa25.07■■□□□ 1.6
TRAPPC11-203ENST00000504526 SPATC1LQ9H0A9 340 aa25.07■■□□□ 1.6
TRAPPC11-203ENST00000504526 TOMM22Q9NS69 142 aa25.07■■□□□ 1.6
TRAPPC11-203ENST00000504526 PPP1R9AQ9ULJ8 1098 aa25.07■■□□□ 1.6
TRAPPC11-203ENST00000504526 ADAMTS5Q9UNA0 930 aa25.07■■□□□ 1.6
TRAPPC11-203ENST00000504526 IVNS1ABPQ9Y6Y0 642 aa25.07■■□□□ 1.6
TRAPPC11-203ENST00000504526 HMGCRP04035 888 aa25.06■■□□□ 1.6
TRAPPC11-203ENST00000504526 INHAP05111 366 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms