RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 CASP8AP2Q9UKL3 1982 aa14.07□□□□□ -0.16
PDLIM5-208ENST00000504489 E7EWF7 191 aa14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 EEF2P13639 858 aaKnown RBP14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 USP14P54578 494 aa14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 MTMR2Q13614 643 aa14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 USP17L2Q6R6M4 530 aa14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 IFNL1Q8IU54 200 aa14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 PROCA1Q8NCQ7 364 aaPredicted RBP14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 ACER1Q8TDN7 264 aa14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 SLC39A7Q92504 469 aa14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 CEP95Q96GE4 821 aa14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 PTPN18Q99952 460 aa14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 USP26Q9BXU7 913 aa14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 ZCCHC17Q9NP64 241 aaKnown RBP14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 MTMR4Q9NYA4 1195 aa14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 TMX2Q9Y320 296 aa14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 TAF6LQ9Y6J9 622 aa14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 DOCK3Q8IZD9 2030 aa14.06□□□□□ -0.16
PDLIM5-208ENST00000504489 A0A1W2PRG0 241 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 B4E1Z4 1266 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 KDM4AO75164 1064 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 NOVP48745 357 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 ATN1P54259 1190 aaPredicted RBP14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 HMGCS2P54868 508 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 TRDNQ13061 729 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 TSGA10IPQ3SY00 556 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 OTUD7BQ6GQQ9 843 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 GPAT2Q6NUI2 795 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 ANKRD23Q86SG2 305 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 CLEC10AQ8IUN9 316 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 NKX2-3Q8TAU0 364 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 KCNB2Q92953 911 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 MKL1Q969V6 931 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 C12orf42Q96LP6 360 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 FEZ1Q99689 392 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 SH2D4AQ9H788 454 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 IL17RBQ9NRM6 502 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 WBP1LQ9NX94 342 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 ZSWIM5Q9P217 1185 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 SYNPO2Q9UMS6 1093 aa14.05□□□□□ -0.16
PDLIM5-208ENST00000504489 ZNFX1Q9P2E3 1918 aaKnown RBP14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 BTBD19C9JJ37 291 aa14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 IGF2BP3O00425 579 aaKnown RBP eCLIP14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 TTLL1O95922 423 aa14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 ALDH1A1P00352 501 aa14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 C7P10643 843 aa14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 HSPA4P34932 840 aa14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 C8orf34Q49A92 452 aa14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 CCDC178Q5BJE1 867 aa14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 GADL1Q6ZQY3 521 aa14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 STOX1Q6ZVD7 989 aa14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 NCOA7Q8NI08 942 aa14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 TTC14Q96N46 770 aa14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 EMILIN3Q9NT22 766 aa14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 TMOD4Q9NZQ9 345 aa14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 SLC45A1Q9Y2W3 748 aa14.04□□□□□ -0.16
PDLIM5-208ENST00000504489 NMT2O60551 498 aa14.03□□□□□ -0.16
PDLIM5-208ENST00000504489 ZKSCAN1P17029 563 aaPredicted RBP14.03□□□□□ -0.16
PDLIM5-208ENST00000504489 ATP2B2Q01814 1243 aa14.03□□□□□ -0.16
PDLIM5-208ENST00000504489 RALYLQ86SE5 291 aaKnown RBP14.03□□□□□ -0.16
PDLIM5-208ENST00000504489 IQCA1Q86XH1 822 aa14.03□□□□□ -0.16
PDLIM5-208ENST00000504489 FAM43AQ8N2R8 423 aa14.03□□□□□ -0.16
PDLIM5-208ENST00000504489 LPAR1Q92633 364 aa14.03□□□□□ -0.16
PDLIM5-208ENST00000504489 VCPKMTQ9H867 229 aa14.03□□□□□ -0.16
PDLIM5-208ENST00000504489 RNF186Q9NXI6 227 aa14.03□□□□□ -0.16
PDLIM5-208ENST00000504489 CLIP2Q9UDT6 1046 aa14.03□□□□□ -0.16
PDLIM5-208ENST00000504489 METRNQ9UJH8 293 aa14.03□□□□□ -0.16
PDLIM5-208ENST00000504489 AGTPBP1Q9UPW5 1226 aa14.03□□□□□ -0.16
PDLIM5-208ENST00000504489 CA12O43570 354 aa14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 HOXA7P31268 230 aaPredicted RBP14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 PABPC4Q13310 644 aaKnown RBP eCLIP14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 DGKZQ13574 1117 aa14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 KRT32Q14532 448 aa14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 RCSD1Q6JBY9 416 aa14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 CYB5R4Q7L1T6 521 aa14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 DGKHQ86XP1 1220 aa14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 ANKS1AQ92625 1134 aa14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 BEGAINQ9BUH8 593 aa14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 CFHR5Q9BXR6 569 aa14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 GOPCQ9HD26 462 aa14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 SAGE1Q9NXZ1 904 aa14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 STX8Q9UNK0 236 aa14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 BAZ2BQ9UIF8 2168 aaKnown RBP14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 SMCHD1A6NHR9 2005 aa14.02□□□□□ -0.17
PDLIM5-208ENST00000504489 PDHXO00330 501 aa14.01□□□□□ -0.17
PDLIM5-208ENST00000504489 TOP1P11387 765 aaKnown RBP14.01□□□□□ -0.17
PDLIM5-208ENST00000504489 MCCP23508 829 aa14.01□□□□□ -0.17
PDLIM5-208ENST00000504489 ZYXQ15942 572 aaKnown RBP14.01□□□□□ -0.17
PDLIM5-208ENST00000504489 TREML2Q5T2D2 321 aa14.01□□□□□ -0.17
PDLIM5-208ENST00000504489 MB21D2Q8IYB1 491 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-208ENST00000504489 ZSCAN10Q96SZ4 725 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-208ENST00000504489 ZKSCAN3Q9BRR0 538 aa14.01□□□□□ -0.17
PDLIM5-208ENST00000504489 SNX14Q9Y5W7 946 aa14.01□□□□□ -0.17
PDLIM5-208ENST00000504489 A0A0G2JMZ2 1700 aa14.01□□□□□ -0.17
PDLIM5-208ENST00000504489 F5H6K3 240 aa14□□□□□ -0.17
PDLIM5-208ENST00000504489 TRPA1O75762 1119 aa14□□□□□ -0.17
PDLIM5-208ENST00000504489 SEC24BO95487 1268 aa14□□□□□ -0.17
PDLIM5-208ENST00000504489 VCAM1P19320 739 aa14□□□□□ -0.17
PDLIM5-208ENST00000504489 KLRC3Q07444 240 aa14□□□□□ -0.17
PDLIM5-208ENST00000504489 TAF1CQ15572 869 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms