RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 RAB27AP51159 221 aa10.95□□□□□ -0.66
PDLIM5-207ENST00000503974 ELF2Q15723 593 aa10.95□□□□□ -0.66
PDLIM5-207ENST00000503974 ZGPATQ8N5A5 531 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-207ENST00000503974 AGBL3Q8NEM8 1001 aa10.95□□□□□ -0.66
PDLIM5-207ENST00000503974 TBC1D5Q92609 795 aa10.95□□□□□ -0.66
PDLIM5-207ENST00000503974 N4BP2L2Q92802 583 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-207ENST00000503974 PDRG1Q9NUG6 133 aa10.95□□□□□ -0.66
PDLIM5-207ENST00000503974 AK9Q5TCS8 1911 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 RPS12P25398 132 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 MFSD14BQ5SR56 506 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 TTC22Q5TAA0 569 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 CCDC181Q5TID7 509 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 APBB1IPQ7Z5R6 666 aaPredicted RBP10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 C3orf20Q8ND61 904 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 SNRKQ9NRH2 765 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 PAG1Q9NWQ8 432 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 MKRN1Q9UHC7 482 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 RFX7Q2KHR2 1363 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 SCN4AP35499 1836 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 TESPA1A2RU30 521 aaPredicted RBP10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 CAPN15O75808 1086 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 FMNL1O95466 1100 aaPredicted RBP10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 GSPT1P15170 499 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 TTF1Q15361 905 aaPredicted RBP10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 C17orf50Q8WW18 174 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 DPF2Q92785 391 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 KAT2BQ92831 832 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 L3MBTL3Q96JM7 780 aaPredicted RBP10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 PICK1Q9NRD5 415 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 JAG2Q9Y219 1238 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 NDUFB9Q9Y6M9 179 aa10.94□□□□□ -0.66
PDLIM5-207ENST00000503974 GLTPD2A6NH11 291 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 RAD21O60216 631 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 PYGBP11216 843 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 PRDX5P30044 214 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 RDXP35241 583 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 SCRN1Q12765 414 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 GRIK5Q16478 980 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 OGFOD1Q8N543 542 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 PHC3Q8NDX5 983 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 PARD3BQ8TEW8 1205 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 JPH2Q9BR39 696 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 MXD3Q9BW11 206 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 PIH1D3Q9NQM4 214 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 MTMR7Q9Y216 660 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 UTRNP46939 3433 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 ADAMTSL1Q8N6G6 1762 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 EPB41L2O43491 1005 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 CLCN6P51797 869 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 PUS10Q3MIT2 529 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 RBM26Q5T8P6 1007 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 TRIM42Q8IWZ5 723 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 KBTBD3Q8NAB2 608 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 EDC3Q96F86 508 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 BICD1Q96G01 975 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 CCDC34Q96HJ3 373 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 USP25Q9UHP3 1055 aa10.93□□□□□ -0.66
PDLIM5-207ENST00000503974 TPP2P29144 1249 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 OAS2P29728 719 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 NF2P35240 595 aa10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 LMAN1P49257 510 aa10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 SCNN1DP51172 638 aa10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 ZNF280AP59817 542 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 HDLBPQ00341 1268 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 PREPLQ4J6C6 727 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 BMP2KLQ5H9B9 411 aa10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 FOXD4L5Q5VV16 416 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 DPY19L2Q6NUT2 758 aa10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 TBC1D9Q6ZT07 1266 aa10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 ZNF384Q8TF68 577 aa10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 FOXD4L4Q8WXT5 416 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 FBXW7Q969H0 707 aa10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 MRFAP1L1Q96HT8 127 aa10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 MRIQ9BWK5 157 aa10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 KIF9Q9HAQ2 790 aa10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 CLIP2Q9UDT6 1046 aa10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 ECM29Q5VYK3 1845 aa10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 MYH2Q9UKX2 1941 aa10.92□□□□□ -0.66
PDLIM5-207ENST00000503974 MAST3O60307 1309 aa10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 IPO5O00410 1097 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 DDNO94850 711 aaPredicted RBP10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 LDHBP07195 334 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 GMPSP49915 693 aaPredicted RBP10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 HSP90B2PQ58FF3 399 aa10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 FOXR1Q6PIV2 292 aa10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 SNRNP27Q8WVK2 155 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 NSUN4Q96CB9 384 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 EVI5LQ96CN4 794 aa10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 ZCCHC17Q9NP64 241 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 ADAM21Q9UKJ8 722 aa10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 PRPF40AO75400 957 aaKnown RBP10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 IFT88Q13099 833 aa10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 GPRC5DQ9NZD1 345 aa10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 ABCF2Q9UG63 623 aa10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 GJA3Q9Y6H8 435 aa10.91□□□□□ -0.66
PDLIM5-207ENST00000503974 GAKO14976 1311 aa10.9□□□□□ -0.66
PDLIM5-207ENST00000503974 ERLIN2O94905 339 aa10.9□□□□□ -0.66
PDLIM5-207ENST00000503974 USP17L8P0C7I0 530 aa10.9□□□□□ -0.66
PDLIM5-207ENST00000503974 MECOMQ03112 1051 aa10.9□□□□□ -0.66
PDLIM5-207ENST00000503974 MAP3K12Q12852 859 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms