RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 MTMR4Q9NYA4 1195 aa25.37■■□□□ 1.65
PTPN13-205ENST00000502971 HDAC9Q9UKV0 1011 aa25.37■■□□□ 1.65
PTPN13-205ENST00000502971 ZNRF3Q9ULT6 936 aa25.37■■□□□ 1.65
PTPN13-205ENST00000502971 SHMT1P34896 483 aa25.36■■□□□ 1.65
PTPN13-205ENST00000502971 KRT2P35908 639 aa25.36■■□□□ 1.65
PTPN13-205ENST00000502971 RILPL1Q5EBL4 403 aa25.36■■□□□ 1.65
PTPN13-205ENST00000502971 CCDC17Q96LX7 622 aa25.36■■□□□ 1.65
PTPN13-205ENST00000502971 CLSTN2Q9H4D0 955 aa25.36■■□□□ 1.65
PTPN13-205ENST00000502971 BRMS1Q9HCU9 246 aa25.36■■□□□ 1.65
PTPN13-205ENST00000502971 PI4KBQ9UBF8 816 aa25.36■■□□□ 1.65
PTPN13-205ENST00000502971 PSMD14O00487 310 aa25.35■■□□□ 1.65
PTPN13-205ENST00000502971 PPP6R2O75170 966 aa25.35■■□□□ 1.65
PTPN13-205ENST00000502971 ENTPD3O75355 529 aa25.35■■□□□ 1.65
PTPN13-205ENST00000502971 NR1I2O75469 434 aa25.35■■□□□ 1.65
PTPN13-205ENST00000502971 AKR1B1P15121 316 aa25.35■■□□□ 1.65
PTPN13-205ENST00000502971 PPP4R3BQ5MIZ7 849 aa25.35■■□□□ 1.65
PTPN13-205ENST00000502971 CCDC73Q6ZRK6 1079 aa25.35■■□□□ 1.65
PTPN13-205ENST00000502971 ZFPM1Q8IX07 1006 aa25.35■■□□□ 1.65
PTPN13-205ENST00000502971 STAG2Q8N3U4 1231 aa25.35■■□□□ 1.65
PTPN13-205ENST00000502971 JMYQ8N9B5 988 aa25.35■■□□□ 1.65
PTPN13-205ENST00000502971 GMLQ99445 158 aa25.35■■□□□ 1.65
PTPN13-205ENST00000502971 COL4A5P29400 1685 aa25.35■■□□□ 1.65
PTPN13-205ENST00000502971 hCG_1642624A0A1W2PR95 340 aa25.34■■□□□ 1.65
PTPN13-205ENST00000502971 NFKBIEO00221 500 aa25.34■■□□□ 1.65
PTPN13-205ENST00000502971 RAD17O75943 681 aa25.34■■□□□ 1.65
PTPN13-205ENST00000502971 CACNB3P54284 484 aa25.34■■□□□ 1.65
PTPN13-205ENST00000502971 SHISA4Q96DD7 197 aa25.34■■□□□ 1.65
PTPN13-205ENST00000502971 MYH8P13535 1937 aa25.34■■□□□ 1.65
PTPN13-205ENST00000502971 PARP1P09874 1014 aaKnown RBP25.34■■□□□ 1.65
PTPN13-205ENST00000502971 SMARCA1P28370 1054 aa25.34■■□□□ 1.65
PTPN13-205ENST00000502971 TCP10Q12799 353 aa25.34■■□□□ 1.65
PTPN13-205ENST00000502971 PTPAQ15257 358 aa25.34■■□□□ 1.65
PTPN13-205ENST00000502971 MAP3K11Q16584 847 aa25.34■■□□□ 1.65
PTPN13-205ENST00000502971 FOXP4Q8IVH2 680 aaPredicted RBP25.34■■□□□ 1.65
PTPN13-205ENST00000502971 MRPS27Q92552 414 aaKnown RBP25.34■■□□□ 1.65
PTPN13-205ENST00000502971 TNMDQ9H2S6 317 aa25.34■■□□□ 1.65
PTPN13-205ENST00000502971 TDRD3Q9H7E2 651 aaKnown RBP25.34■■□□□ 1.65
PTPN13-205ENST00000502971 SH3GLB2Q9NR46 395 aa25.34■■□□□ 1.65
PTPN13-205ENST00000502971 COL2A1P02458 1487 aaPredicted RBP25.33■■□□□ 1.65
PTPN13-205ENST00000502971 PRMT6Q96LA8 375 aaPredicted RBP25.33■■□□□ 1.65
PTPN13-205ENST00000502971 PANK2Q9BZ23 570 aa25.33■■□□□ 1.65
PTPN13-205ENST00000502971 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.33■■□□□ 1.65
PTPN13-205ENST00000502971 TTLL1O95922 423 aa25.32■■□□□ 1.64
PTPN13-205ENST00000502971 FAM160A1Q05DH4 1040 aa25.32■■□□□ 1.64
PTPN13-205ENST00000502971 NR5A1Q13285 461 aa25.32■■□□□ 1.64
PTPN13-205ENST00000502971 RBM43Q6ZSC3 357 aaKnown RBP25.32■■□□□ 1.64
PTPN13-205ENST00000502971 OGFOD1Q8N543 542 aa25.32■■□□□ 1.64
PTPN13-205ENST00000502971 FSIP1Q8NA03 581 aa25.32■■□□□ 1.64
PTPN13-205ENST00000502971 AGBL3Q8NEM8 1001 aa25.32■■□□□ 1.64
PTPN13-205ENST00000502971 OXER1Q8TDS5 423 aa25.32■■□□□ 1.64
PTPN13-205ENST00000502971 FUCA2Q9BTY2 467 aa25.32■■□□□ 1.64
PTPN13-205ENST00000502971 SPZ1Q9BXG8 430 aa25.32■■□□□ 1.64
PTPN13-205ENST00000502971 DDTLA6NHG4 134 aaPredicted RBP25.32■■□□□ 1.64
PTPN13-205ENST00000502971 ZSCAN29Q8IWY8 852 aaPredicted RBP25.32■■□□□ 1.64
PTPN13-205ENST00000502971 FAM177A1Q8N128 213 aaPredicted RBP25.32■■□□□ 1.64
PTPN13-205ENST00000502971 ENGASEQ8NFI3 743 aa25.32■■□□□ 1.64
PTPN13-205ENST00000502971 GOLPH3LQ9H4A5 285 aa25.32■■□□□ 1.64
PTPN13-205ENST00000502971 ATRNL1Q5VV63 1379 aa25.31■■□□□ 1.64
PTPN13-205ENST00000502971 SPDYE2BA6NHP3 402 aa25.31■■□□□ 1.64
PTPN13-205ENST00000502971 KLRF2D3W0D1 207 aa25.31■■□□□ 1.64
PTPN13-205ENST00000502971 SPDYE6P0CI01 402 aa25.31■■□□□ 1.64
PTPN13-205ENST00000502971 SH3BP5LQ7L8J4 393 aa25.31■■□□□ 1.64
PTPN13-205ENST00000502971 TMOD2Q9NZR1 351 aa25.31■■□□□ 1.64
PTPN13-205ENST00000502971 CTAGE5O15320 804 aa25.3■■□□□ 1.64
PTPN13-205ENST00000502971 TOB1P50616 345 aaPredicted RBP25.3■■□□□ 1.64
PTPN13-205ENST00000502971 SNW1Q13573 536 aaKnown RBP25.3■■□□□ 1.64
PTPN13-205ENST00000502971 AXDND1Q5T1B0 1012 aaPredicted RBP25.3■■□□□ 1.64
PTPN13-205ENST00000502971 METTL16Q86W50 562 aaKnown RBP25.3■■□□□ 1.64
PTPN13-205ENST00000502971 JDP2Q8WYK2 163 aa25.3■■□□□ 1.64
PTPN13-205ENST00000502971 TRIM34Q9BYJ4 488 aa25.3■■□□□ 1.64
PTPN13-205ENST00000502971 DNAJC18Q9H819 358 aa25.3■■□□□ 1.64
PTPN13-205ENST00000502971 SIPA1L1O43166 1804 aa25.3■■□□□ 1.64
PTPN13-205ENST00000502971 GREB1LQ9C091 1923 aaPredicted RBP25.3■■□□□ 1.64
PTPN13-205ENST00000502971 CMA1P23946 247 aa25.29■■□□□ 1.64
PTPN13-205ENST00000502971 CALML3P27482 149 aa25.29■■□□□ 1.64
PTPN13-205ENST00000502971 NLRP5P59047 1200 aa25.29■■□□□ 1.64
PTPN13-205ENST00000502971 DLGAP5Q15398 846 aa25.29■■□□□ 1.64
PTPN13-205ENST00000502971 CAMK4Q16566 473 aa25.29■■□□□ 1.64
PTPN13-205ENST00000502971 ANP32BQ92688 251 aaKnown RBP25.29■■□□□ 1.64
PTPN13-205ENST00000502971 CEP131Q9UPN4 1083 aa25.29■■□□□ 1.64
PTPN13-205ENST00000502971 MTMR7Q9Y216 660 aa25.29■■□□□ 1.64
PTPN13-205ENST00000502971 CYTH3O43739 400 aa25.29■■□□□ 1.64
PTPN13-205ENST00000502971 CCDC192P0DO97 292 aa25.29■■□□□ 1.64
PTPN13-205ENST00000502971 NPY5RQ15761 445 aa25.29■■□□□ 1.64
PTPN13-205ENST00000502971 TATDN1Q6P1N9 297 aa25.29■■□□□ 1.64
PTPN13-205ENST00000502971 MTMR14Q8NCE2 650 aa25.29■■□□□ 1.64
PTPN13-205ENST00000502971 CABP5Q9NP86 173 aa25.29■■□□□ 1.64
PTPN13-205ENST00000502971 KINO60870 393 aaKnown RBP25.28■■□□□ 1.64
PTPN13-205ENST00000502971 SLC35G1Q2M3R5 365 aa25.28■■□□□ 1.64
PTPN13-205ENST00000502971 ASPRV1Q53RT3 343 aa25.28■■□□□ 1.64
PTPN13-205ENST00000502971 FMR1NBQ8N0W7 255 aaPredicted RBP25.28■■□□□ 1.64
PTPN13-205ENST00000502971 PIBF1Q8WXW3 757 aa25.28■■□□□ 1.64
PTPN13-205ENST00000502971 TNFRSF25Q93038 417 aa25.28■■□□□ 1.64
PTPN13-205ENST00000502971 CLIP2Q9UDT6 1046 aa25.28■■□□□ 1.64
PTPN13-205ENST00000502971 MORC2Q9Y6X9 1032 aaPredicted RBP25.28■■□□□ 1.64
PTPN13-205ENST00000502971 MPHOSPH10O00566 681 aaKnown RBP25.27■■□□□ 1.64
PTPN13-205ENST00000502971 CUTAO60888 179 aa25.27■■□□□ 1.64
PTPN13-205ENST00000502971 GOLGA8HP0CJ92 632 aa25.27■■□□□ 1.64
PTPN13-205ENST00000502971 SNHG28P0DPA3 235 aa25.27■■□□□ 1.64
PTPN13-205ENST00000502971 PDHBP11177 359 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms