RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 RNF141Q8WVD5 230 aa6.83□□□□□ -1.32
CDC42SE2-204ENST00000502639 DHX38Q92620 1227 aaKnown RBP6.83□□□□□ -1.32
CDC42SE2-204ENST00000502639 PRKAG3Q9UGI9 489 aa6.83□□□□□ -1.32
CDC42SE2-204ENST00000502639 GTF2IRD1Q9UHL9 959 aa6.83□□□□□ -1.32
CDC42SE2-204ENST00000502639 ITIH2P19823 946 aa6.82□□□□□ -1.32
CDC42SE2-204ENST00000502639 SSTR4P31391 388 aa6.82□□□□□ -1.32
CDC42SE2-204ENST00000502639 CD97P48960 835 aa6.82□□□□□ -1.32
CDC42SE2-204ENST00000502639 TNK2Q07912 1038 aa6.82□□□□□ -1.32
CDC42SE2-204ENST00000502639 MICAL1Q8TDZ2 1067 aa6.82□□□□□ -1.32
CDC42SE2-204ENST00000502639 FBXL18Q96ME1 805 aa6.82□□□□□ -1.32
CDC42SE2-204ENST00000502639 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDC42SE2-204ENST00000502639 MKNK2Q9HBH9 465 aa6.82□□□□□ -1.32
CDC42SE2-204ENST00000502639 SUCOQ9UBS9 1254 aaKnown RBP6.82□□□□□ -1.32
CDC42SE2-204ENST00000502639 ZNF214Q9UL59 606 aaPredicted RBP6.82□□□□□ -1.32
CDC42SE2-204ENST00000502639 PCDHB10Q9UN67 800 aa6.82□□□□□ -1.32
CDC42SE2-204ENST00000502639 KLF4O43474 513 aa6.81□□□□□ -1.32
CDC42SE2-204ENST00000502639 ADAMTS4O75173 837 aa6.81□□□□□ -1.32
CDC42SE2-204ENST00000502639 CLEC3AO75596 197 aa6.81□□□□□ -1.32
CDC42SE2-204ENST00000502639 PMS1P54277 932 aaKnown RBP6.81□□□□□ -1.32
CDC42SE2-204ENST00000502639 PPP2R5EQ16537 467 aa6.81□□□□□ -1.32
CDC42SE2-204ENST00000502639 ZNF746Q6NUN9 644 aaPredicted RBP6.81□□□□□ -1.32
CDC42SE2-204ENST00000502639 NFXL1Q6ZNB6 911 aa6.81□□□□□ -1.32
CDC42SE2-204ENST00000502639 WFDC3Q8IUB2 231 aa6.81□□□□□ -1.32
CDC42SE2-204ENST00000502639 DTWD2Q8NBA8 298 aa6.81□□□□□ -1.32
CDC42SE2-204ENST00000502639 HNRNPLLQ8WVV9 542 aaKnown RBP6.81□□□□□ -1.32
CDC42SE2-204ENST00000502639 SREK1Q8WXA9 508 aaKnown RBP6.81□□□□□ -1.32
CDC42SE2-204ENST00000502639 KLHL6Q8WZ60 621 aa6.81□□□□□ -1.32
CDC42SE2-204ENST00000502639 ST14Q9Y5Y6 855 aa6.81□□□□□ -1.32
CDC42SE2-204ENST00000502639 WASH4PA8MWX3 477 aa6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 COBLO75128 1261 aa6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 CEACAM5P06731 702 aa6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 ATP2B1P20020 1258 aa6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 SPINK2P20155 84 aa6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 CYP7A1P22680 504 aa6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 SNW1Q13573 536 aaKnown RBP6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 NBPF9Q3BBW0 867 aa6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 AXDND1Q5T1B0 1012 aaPredicted RBP6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 TDRD10Q5VZ19 366 aaKnown RBP6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 ANKS3Q6ZW76 656 aa6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 MFSD4AQ8N468 514 aa6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 NETO1Q8TDF5 533 aa6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 ASPNQ9BXN1 380 aa6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 KRTAP4-7Q9BYR0 210 aa6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 DUSP15Q9H1R2 295 aaPredicted RBP6.8□□□□□ -1.32
CDC42SE2-204ENST00000502639 SHISA3A0PJX4 238 aa6.79□□□□□ -1.32
CDC42SE2-204ENST00000502639 KIAA1324LA8MWY0 1029 aaPredicted RBP6.79□□□□□ -1.32
CDC42SE2-204ENST00000502639 SHOXO15266 292 aa6.79□□□□□ -1.32
CDC42SE2-204ENST00000502639 GTF2F1P35269 517 aaKnown RBP eCLIP6.79□□□□□ -1.32
CDC42SE2-204ENST00000502639 KIR3DL1P43629 444 aa6.79□□□□□ -1.32
CDC42SE2-204ENST00000502639 RBL2Q08999 1139 aa6.79□□□□□ -1.32
CDC42SE2-204ENST00000502639 DTX1Q86Y01 620 aa6.79□□□□□ -1.32
CDC42SE2-204ENST00000502639 CELF2-AS1Q8N7Q2 184 aa6.79□□□□□ -1.32
CDC42SE2-204ENST00000502639 COX4I2Q96KJ9 171 aa6.79□□□□□ -1.32
CDC42SE2-204ENST00000502639 HSPA12BQ96MM6 686 aa6.79□□□□□ -1.32
CDC42SE2-204ENST00000502639 SEMA3GQ9NS98 782 aa6.79□□□□□ -1.32
CDC42SE2-204ENST00000502639 PCMTD2Q9NV79 361 aa6.79□□□□□ -1.32
CDC42SE2-204ENST00000502639 FAM86C1Q9NVL1 165 aa6.79□□□□□ -1.32
CDC42SE2-204ENST00000502639 GNAT3A8MTJ3 354 aa6.78□□□□□ -1.32
CDC42SE2-204ENST00000502639 TP53P04637 393 aaPredicted RBP6.78□□□□□ -1.32
CDC42SE2-204ENST00000502639 SRFP11831 508 aa6.78□□□□□ -1.32
CDC42SE2-204ENST00000502639 CD96P40200 585 aa6.78□□□□□ -1.32
CDC42SE2-204ENST00000502639 IFI16Q16666 785 aaKnown RBP6.78□□□□□ -1.32
CDC42SE2-204ENST00000502639 LCE1DQ5T752 114 aa6.78□□□□□ -1.32
CDC42SE2-204ENST00000502639 CDKAL1Q5VV42 579 aa6.78□□□□□ -1.32
CDC42SE2-204ENST00000502639 INTS5Q6P9B9 1019 aaKnown RBP6.78□□□□□ -1.32
CDC42SE2-204ENST00000502639 DHRS1Q96LJ7 313 aa6.78□□□□□ -1.32
CDC42SE2-204ENST00000502639 ACTR10Q9NZ32 417 aa6.78□□□□□ -1.32
CDC42SE2-204ENST00000502639 B2RBV5 119 aa6.77□□□□□ -1.33
CDC42SE2-204ENST00000502639 CBFA2T2O43439 604 aa6.77□□□□□ -1.33
CDC42SE2-204ENST00000502639 BNIP3Q12983 259 aa6.77□□□□□ -1.33
CDC42SE2-204ENST00000502639 TNNI3KQ59H18 835 aa6.77□□□□□ -1.33
CDC42SE2-204ENST00000502639 DCAF15Q66K64 600 aa6.77□□□□□ -1.33
CDC42SE2-204ENST00000502639 TMC3Q7Z5M5 1100 aa6.77□□□□□ -1.33
CDC42SE2-204ENST00000502639 SPRED2Q7Z698 418 aa6.77□□□□□ -1.33
CDC42SE2-204ENST00000502639 PIWIL2Q8TC59 973 aaKnown RBP6.77□□□□□ -1.33
CDC42SE2-204ENST00000502639 FMNL2Q96PY5 1086 aa6.77□□□□□ -1.33
CDC42SE2-204ENST00000502639 PRDM14Q9GZV8 571 aa6.77□□□□□ -1.33
CDC42SE2-204ENST00000502639 PHAXQ9H814 394 aaKnown RBP6.77□□□□□ -1.33
CDC42SE2-204ENST00000502639 SUSD2Q9UGT4 822 aa6.77□□□□□ -1.33
CDC42SE2-204ENST00000502639 PITPNM2Q9BZ72 1349 aa6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 FAM155AB1AL88 458 aaPredicted RBP6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 PAX4O43316 350 aa6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 STK10O94804 968 aaKnown RBP6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 PRNPP04156 253 aa6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 GRIK1P39086 918 aa6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 RNF4P78317 190 aa6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 AUHQ13825 339 aaKnown RBP6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 SF3A1Q15459 793 aaKnown RBP6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 GNPTABQ3T906 1256 aa6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 MRM1Q6IN84 353 aaKnown RBP6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 ARHGAP27Q6ZUM4 889 aa6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 BCL7CQ8WUZ0 217 aaPredicted RBP6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 ARMC5Q96C12 935 aa6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 DRC1Q96MC2 740 aa6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 BSDC1Q9NW68 430 aaPredicted RBP6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 PPP1R1BQ9UD71 204 aaPredicted RBP6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 MINPP1Q9UNW1 487 aa6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 SLC12A7Q9Y666 1083 aa6.76□□□□□ -1.33
CDC42SE2-204ENST00000502639 TMEM265A0A087WTH1 108 aa6.75□□□□□ -1.33
CDC42SE2-204ENST00000502639 H3BS24 57 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms