RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 GOPCQ9HD26 462 aa19.82■□□□□ 0.76
PRKCB-210ENST00000498739 RBM8AQ9Y5S9 174 aaKnown RBP19.82■□□□□ 0.76
PRKCB-210ENST00000498739 USP17L15C9J2P7 530 aa19.81■□□□□ 0.76
PRKCB-210ENST00000498739 USP17L13C9JLJ4 530 aa19.81■□□□□ 0.76
PRKCB-210ENST00000498739 USP17L11C9JVI0 530 aa19.81■□□□□ 0.76
PRKCB-210ENST00000498739 USP17L18D6R9N7 530 aa19.81■□□□□ 0.76
PRKCB-210ENST00000498739 USP17L22D6RA61 530 aa19.81■□□□□ 0.76
PRKCB-210ENST00000498739 USP17L17D6RBQ6 530 aa19.81■□□□□ 0.76
PRKCB-210ENST00000498739 USP17L19D6RCP7 530 aa19.81■□□□□ 0.76
PRKCB-210ENST00000498739 USP17L20D6RJB6 530 aa19.81■□□□□ 0.76
PRKCB-210ENST00000498739 NMT2O60551 498 aa19.81■□□□□ 0.76
PRKCB-210ENST00000498739 CYP21A2P08686 494 aa19.81■□□□□ 0.76
PRKCB-210ENST00000498739 USP17L24Q0WX57 530 aa19.81■□□□□ 0.76
PRKCB-210ENST00000498739 COL13A1Q5TAT6 717 aaPredicted RBP19.81■□□□□ 0.76
PRKCB-210ENST00000498739 LPAR1Q92633 364 aa19.81■□□□□ 0.76
PRKCB-210ENST00000498739 IL17RBQ9NRM6 502 aa19.81■□□□□ 0.76
PRKCB-210ENST00000498739 STX8Q9UNK0 236 aa19.81■□□□□ 0.76
PRKCB-210ENST00000498739 PPP4R3BQ5MIZ7 849 aa19.8■□□□□ 0.76
PRKCB-210ENST00000498739 LRRC47Q8N1G4 583 aaKnown RBP19.8■□□□□ 0.76
PRKCB-210ENST00000498739 NKX2-3Q8TAU0 364 aa19.8■□□□□ 0.76
PRKCB-210ENST00000498739 CD99L2Q8TCZ2 262 aa19.8■□□□□ 0.76
PRKCB-210ENST00000498739 B4E1Z4 1266 aa19.79■□□□□ 0.76
PRKCB-210ENST00000498739 KDM4AO75164 1064 aa19.79■□□□□ 0.76
PRKCB-210ENST00000498739 CATSPERGQ6ZRH7 1159 aa19.79■□□□□ 0.76
PRKCB-210ENST00000498739 MKL1Q969V6 931 aa19.79■□□□□ 0.76
PRKCB-210ENST00000498739 ERO1AQ96HE7 468 aa19.79■□□□□ 0.76
PRKCB-210ENST00000498739 P2RX7Q99572 595 aaKnown RBP19.79■□□□□ 0.76
PRKCB-210ENST00000498739 KRT23Q9C075 422 aa19.79■□□□□ 0.76
PRKCB-210ENST00000498739 TANGO6Q9C0B7 1094 aa19.79■□□□□ 0.76
PRKCB-210ENST00000498739 CNNM2Q9H8M5 875 aa19.79■□□□□ 0.76
PRKCB-210ENST00000498739 F5H6K3 240 aa19.78■□□□□ 0.76
PRKCB-210ENST00000498739 WDR46O15213 610 aaKnown RBP19.78■□□□□ 0.76
PRKCB-210ENST00000498739 ECM2O94769 699 aaPredicted RBP19.78■□□□□ 0.76
PRKCB-210ENST00000498739 BCRP11274 1271 aa19.78■□□□□ 0.76
PRKCB-210ENST00000498739 NT5C2P49902 561 aa19.78■□□□□ 0.76
PRKCB-210ENST00000498739 HERVK_113P62684 666 aa19.78■□□□□ 0.76
PRKCB-210ENST00000498739 KLRC3Q07444 240 aa19.78■□□□□ 0.76
PRKCB-210ENST00000498739 ANKRD13CQ8N6S4 541 aa19.78■□□□□ 0.76
PRKCB-210ENST00000498739 TCP11L1Q9NUJ3 509 aa19.78■□□□□ 0.76
PRKCB-210ENST00000498739 GCLCP48506 637 aaPredicted RBP19.77■□□□□ 0.76
PRKCB-210ENST00000498739 TRDNQ13061 729 aa19.77■□□□□ 0.76
PRKCB-210ENST00000498739 ZKSCAN3Q9BRR0 538 aa19.77■□□□□ 0.76
PRKCB-210ENST00000498739 SYNPO2Q9UMS6 1093 aa19.77■□□□□ 0.76
PRKCB-210ENST00000498739 TAF6LQ9Y6J9 622 aa19.77■□□□□ 0.76
PRKCB-210ENST00000498739 CASP8AP2Q9UKL3 1982 aa19.77■□□□□ 0.75
PRKCB-210ENST00000498739 E7EWF7 191 aa19.76■□□□□ 0.75
PRKCB-210ENST00000498739 NDUFB10O96000 172 aa19.76■□□□□ 0.75
PRKCB-210ENST00000498739 LACTBP83111 547 aaPredicted RBP19.76■□□□□ 0.75
PRKCB-210ENST00000498739 KIF22Q14807 665 aa19.76■□□□□ 0.75
PRKCB-210ENST00000498739 FAM83BQ5T0W9 1011 aa19.76■□□□□ 0.75
PRKCB-210ENST00000498739 CTU1Q7Z7A3 348 aaKnown RBP19.76■□□□□ 0.75
PRKCB-210ENST00000498739 IQCA1Q86XH1 822 aa19.76■□□□□ 0.75
PRKCB-210ENST00000498739 GMCL1P1Q8NEA9 526 aa19.76■□□□□ 0.75
PRKCB-210ENST00000498739 SLC27A2O14975 620 aa19.75■□□□□ 0.75
PRKCB-210ENST00000498739 FLOT1O75955 427 aa19.75■□□□□ 0.75
PRKCB-210ENST00000498739 COG2Q14746 738 aa19.75■□□□□ 0.75
PRKCB-210ENST00000498739 NECTIN1Q15223 517 aa19.75■□□□□ 0.75
PRKCB-210ENST00000498739 FAM110CQ1W6H9 321 aa19.75■□□□□ 0.75
PRKCB-210ENST00000498739 CREB3L3Q68CJ9 461 aa19.75■□□□□ 0.75
PRKCB-210ENST00000498739 SAMD1Q6SPF0 538 aaPredicted RBP19.75■□□□□ 0.75
PRKCB-210ENST00000498739 RALYLQ86SE5 291 aaKnown RBP19.75■□□□□ 0.75
PRKCB-210ENST00000498739 GTF3C2Q8WUA4 911 aaPredicted RBP19.75■□□□□ 0.75
PRKCB-210ENST00000498739 NUP88Q99567 741 aaPredicted RBP19.75■□□□□ 0.75
PRKCB-210ENST00000498739 PAGR1Q9BTK6 254 aa19.75■□□□□ 0.75
PRKCB-210ENST00000498739 ZSWIM5Q9P217 1185 aa19.75■□□□□ 0.75
PRKCB-210ENST00000498739 MYH4Q9Y623 1939 aa19.74■□□□□ 0.75
PRKCB-210ENST00000498739 SPDYE16A6NNV3 312 aaPredicted RBP19.74■□□□□ 0.75
PRKCB-210ENST00000498739 NOVP48745 357 aa19.74■□□□□ 0.75
PRKCB-210ENST00000498739 SLFN13Q68D06 897 aa19.74■□□□□ 0.75
PRKCB-210ENST00000498739 STOX1Q6ZVD7 989 aa19.74■□□□□ 0.75
PRKCB-210ENST00000498739 NCOA7Q8NI08 942 aa19.74■□□□□ 0.75
PRKCB-210ENST00000498739 ARHGAP39Q9C0H5 1083 aa19.74■□□□□ 0.75
PRKCB-210ENST00000498739 ISY1Q9ULR0 285 aaKnown RBP19.74■□□□□ 0.75
PRKCB-210ENST00000498739 MTMR7Q9Y216 660 aa19.74■□□□□ 0.75
PRKCB-210ENST00000498739 TRIM17Q9Y577 477 aa19.74■□□□□ 0.75
PRKCB-210ENST00000498739 PEX10O60683 326 aa19.73■□□□□ 0.75
PRKCB-210ENST00000498739 TOP1P11387 765 aaKnown RBP19.73■□□□□ 0.75
PRKCB-210ENST00000498739 CAP1Q01518 475 aa19.73■□□□□ 0.75
PRKCB-210ENST00000498739 ARHGEF6Q15052 776 aa19.73■□□□□ 0.75
PRKCB-210ENST00000498739 CCDC178Q5BJE1 867 aa19.73■□□□□ 0.75
PRKCB-210ENST00000498739 CYB5R4Q7L1T6 521 aa19.73■□□□□ 0.75
PRKCB-210ENST00000498739 CHMP4CQ96CF2 233 aa19.73■□□□□ 0.75
PRKCB-210ENST00000498739 TTC14Q96N46 770 aa19.73■□□□□ 0.75
PRKCB-210ENST00000498739 ZSCAN10Q96SZ4 725 aaPredicted RBP19.73■□□□□ 0.75
PRKCB-210ENST00000498739 TMEM47Q9BQJ4 181 aa19.73■□□□□ 0.75
PRKCB-210ENST00000498739 EFCC1Q9HA90 598 aa19.73■□□□□ 0.75
PRKCB-210ENST00000498739 TXNRD2Q9NNW7 524 aa19.73■□□□□ 0.75
PRKCB-210ENST00000498739 HOXC10Q9NYD6 342 aa19.73■□□□□ 0.75
PRKCB-210ENST00000498739 RBPJLQ9UBG7 517 aa19.73■□□□□ 0.75
PRKCB-210ENST00000498739 MORF4L1Q9UBU8 362 aa19.73■□□□□ 0.75
PRKCB-210ENST00000498739 REC8O95072 547 aa19.72■□□□□ 0.75
PRKCB-210ENST00000498739 FMNL1O95466 1100 aaPredicted RBP19.72■□□□□ 0.75
PRKCB-210ENST00000498739 BMP3P12645 472 aa19.72■□□□□ 0.75
PRKCB-210ENST00000498739 DSG3P32926 999 aa19.72■□□□□ 0.75
PRKCB-210ENST00000498739 PSMC4P43686 418 aa19.72■□□□□ 0.75
PRKCB-210ENST00000498739 RNF20Q5VTR2 975 aa19.72■□□□□ 0.75
PRKCB-210ENST00000498739 RCSD1Q6JBY9 416 aa19.72■□□□□ 0.75
PRKCB-210ENST00000498739 LBX2Q6XYB7 198 aa19.72■□□□□ 0.75
PRKCB-210ENST00000498739 OTOP1Q7RTM1 612 aa19.72■□□□□ 0.75
PRKCB-210ENST00000498739 ATG4CQ96DT6 458 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms