RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 NAA15Q9BXJ9 866 aaKnown RBP22.39■■□□□ 1.17
NKX2-1-202ENST00000498187 TAF1P21675 1872 aa22.38■■□□□ 1.17
NKX2-1-202ENST00000498187 A0A1B0GTH6 734 aa22.38■■□□□ 1.17
NKX2-1-202ENST00000498187 TXLNAP40222 546 aa22.38■■□□□ 1.17
NKX2-1-202ENST00000498187 IQCA1Q86XH1 822 aa22.38■■□□□ 1.17
NKX2-1-202ENST00000498187 ANKRD18AQ8IVF6 992 aa22.38■■□□□ 1.17
NKX2-1-202ENST00000498187 BRIP1Q9BX63 1249 aa22.38■■□□□ 1.17
NKX2-1-202ENST00000498187 RBM28Q9NW13 759 aaKnown RBP22.38■■□□□ 1.17
NKX2-1-202ENST00000498187 CASP1P29466 404 aa22.37■■□□□ 1.17
NKX2-1-202ENST00000498187 PAGE5Q96GU1 130 aa22.37■■□□□ 1.17
NKX2-1-202ENST00000498187 SPATA31A1Q5TZJ5 1347 aa22.37■■□□□ 1.17
NKX2-1-202ENST00000498187 CD44P16070 742 aaKnown RBP22.37■■□□□ 1.17
NKX2-1-202ENST00000498187 TROAPQ12815 778 aa22.37■■□□□ 1.17
NKX2-1-202ENST00000498187 KLHL10Q6JEL2 608 aa22.37■■□□□ 1.17
NKX2-1-202ENST00000498187 C3orf67Q6ZVT6 689 aa22.37■■□□□ 1.17
NKX2-1-202ENST00000498187 SH3RF1Q7Z6J0 888 aa22.37■■□□□ 1.17
NKX2-1-202ENST00000498187 FERMT2Q96AC1 680 aa22.37■■□□□ 1.17
NKX2-1-202ENST00000498187 DLEC1Q9Y238 1755 aa22.37■■□□□ 1.17
NKX2-1-202ENST00000498187 CCDC151A5D8V7 595 aa22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 UBE4AQ14139 1066 aa22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 BRD3Q15059 726 aa22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 DDB1Q16531 1140 aa22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 NOM1Q5C9Z4 860 aaKnown RBP22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 DESI2Q9BSY9 194 aa22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 BRMS1Q9HCU9 246 aa22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 SYNRGQ9UMZ2 1314 aa22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 CALM1P0DP23 149 aa22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 CALM2P0DP24 149 aa22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 CALM3P0DP25 149 aa22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 STX17P56962 302 aa22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 KARSQ15046 597 aaKnown RBP22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 ZNF174Q15697 407 aa22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 CAVIN4Q5BKX8 364 aa22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 ZNF384Q8TF68 577 aa22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 FUT8Q9BYC5 575 aa22.36■■□□□ 1.17
NKX2-1-202ENST00000498187 TEX33O43247 280 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 BMP15O95972 392 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 IRX5P78411 483 aaPredicted RBP22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 ERFEQ4G0M1 354 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 SPATA1Q5VX52 437 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 CTR9Q6PD62 1173 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 APTXQ7Z2E3 356 aaKnown RBP22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 PPFIBP1Q86W92 1011 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 ZNF652Q9Y2D9 606 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 SCN7AQ01118 1682 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 FGRP09769 529 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 TUBB4BP68371 445 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 CUL4BQ13620 913 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 TUBB2AQ13885 445 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 NPY5RQ15761 445 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 TMTC3Q6ZXV5 915 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 TNFRSF25Q93038 417 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 TUBB2BQ9BVA1 445 aa22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 MRPL44Q9H9J2 332 aaKnown RBP22.35■■□□□ 1.17
NKX2-1-202ENST00000498187 TULP2O00295 520 aa22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 DPYDQ12882 1025 aa22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 TTC38Q5R3I4 469 aa22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 SRGAP1Q7Z6B7 1085 aa22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 CNTNAP5Q8WYK1 1306 aa22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 USP17L12C9JPN9 530 aa22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 USP17L21D6R901 530 aa22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 KIF5CO60282 957 aa22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 DDAH1O94760 285 aa22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 CHMP4BP1P59074 171 aa22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 SMYD4Q8IYR2 804 aaPredicted RBP22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 CEP112Q8N8E3 955 aa22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 FAM84BQ96KN1 310 aaPredicted RBP22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 ZCCHC17Q9NP64 241 aaKnown RBP22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 BSDC1Q9NW68 430 aaPredicted RBP22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 ADGRG1Q9Y653 693 aa22.34■■□□□ 1.17
NKX2-1-202ENST00000498187 CASZ1Q86V15 1759 aa22.33■■□□□ 1.17
NKX2-1-202ENST00000498187 A0A0U1RQG5 324 aaPredicted RBP22.33■■□□□ 1.17
NKX2-1-202ENST00000498187 POTEB2H3BUK9 544 aa22.33■■□□□ 1.17
NKX2-1-202ENST00000498187 ADAMTS2O95450 1211 aa22.33■■□□□ 1.17
NKX2-1-202ENST00000498187 PCP11498 1178 aaKnown RBP22.33■■□□□ 1.17
NKX2-1-202ENST00000498187 EVX2Q03828 476 aa22.33■■□□□ 1.17
NKX2-1-202ENST00000498187 LONRF2Q1L5Z9 754 aa22.33■■□□□ 1.17
NKX2-1-202ENST00000498187 GSDMAQ96QA5 445 aa22.33■■□□□ 1.17
NKX2-1-202ENST00000498187 CTAGE1Q96RT6 745 aa22.33■■□□□ 1.17
NKX2-1-202ENST00000498187 MINPP1Q9UNW1 487 aa22.33■■□□□ 1.17
NKX2-1-202ENST00000498187 SOWAHDA6NJG2 315 aa22.32■■□□□ 1.16
NKX2-1-202ENST00000498187 NUTM2BA6NNL0 878 aaPredicted RBP22.32■■□□□ 1.16
NKX2-1-202ENST00000498187 NUTM2EB1AL46 878 aaPredicted RBP22.32■■□□□ 1.16
NKX2-1-202ENST00000498187 MTF1Q14872 753 aa22.32■■□□□ 1.16
NKX2-1-202ENST00000498187 IGSF22Q8N9C0 903 aa22.32■■□□□ 1.16
NKX2-1-202ENST00000498187 MARCH10Q8NA82 808 aaPredicted RBP22.32■■□□□ 1.16
NKX2-1-202ENST00000498187 NEK11Q8NG66 645 aa22.32■■□□□ 1.16
NKX2-1-202ENST00000498187 PTGDRQ13258 359 aa22.32■■□□□ 1.16
NKX2-1-202ENST00000498187 MUM1L1Q5H9M0 696 aa22.32■■□□□ 1.16
NKX2-1-202ENST00000498187 CDKAL1Q5VV42 579 aa22.32■■□□□ 1.16
NKX2-1-202ENST00000498187 SRBD1Q8N5C6 995 aaKnown RBP22.32■■□□□ 1.16
NKX2-1-202ENST00000498187 HNRNPLLQ8WVV9 542 aaKnown RBP22.32■■□□□ 1.16
NKX2-1-202ENST00000498187 TMEM51Q9NW97 253 aa22.32■■□□□ 1.16
NKX2-1-202ENST00000498187 MYH13Q9UKX3 1938 aa22.32■■□□□ 1.16
NKX2-1-202ENST00000498187 PPP1R3GB7ZBB8 358 aa22.31■■□□□ 1.16
NKX2-1-202ENST00000498187 NMT2O60551 498 aa22.31■■□□□ 1.16
NKX2-1-202ENST00000498187 ST5P78524 1137 aa22.31■■□□□ 1.16
NKX2-1-202ENST00000498187 ATP2C1P98194 919 aaPredicted RBP22.31■■□□□ 1.16
NKX2-1-202ENST00000498187 SF3B3Q15393 1217 aaKnown RBP22.31■■□□□ 1.16
NKX2-1-202ENST00000498187 CTCFLQ8NI51 663 aaPredicted RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms