RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 C11orf49Q9H6J7 331 aa22.41■■□□□ 1.18
PRKCB-209ENST00000498058 ZMYND8Q9ULU4 1186 aaPredicted RBP22.41■■□□□ 1.18
PRKCB-209ENST00000498058 SOX1O00570 391 aaPredicted RBP22.4■■□□□ 1.18
PRKCB-209ENST00000498058 AKR1B1P15121 316 aa22.4■■□□□ 1.18
PRKCB-209ENST00000498058 TRMT44Q8IYL2 757 aaKnown RBP22.4■■□□□ 1.18
PRKCB-209ENST00000498058 NPLOC4Q8TAT6 608 aa22.4■■□□□ 1.18
PRKCB-209ENST00000498058 A0A0G2JMZ2 1700 aa22.4■■□□□ 1.18
PRKCB-209ENST00000498058 WDR78Q5VTH9 848 aa22.39■■□□□ 1.17
PRKCB-209ENST00000498058 PARP14Q460N5 1801 aa22.38■■□□□ 1.17
PRKCB-209ENST00000498058 SLC15A5A6NIM6 579 aa22.38■■□□□ 1.17
PRKCB-209ENST00000498058 IGHA2P01877 340 aa22.38■■□□□ 1.17
PRKCB-209ENST00000498058 COL6A1P12109 1028 aa22.38■■□□□ 1.17
PRKCB-209ENST00000498058 CCNA1P78396 465 aa22.38■■□□□ 1.17
PRKCB-209ENST00000498058 GRB14Q14449 540 aa22.38■■□□□ 1.17
PRKCB-209ENST00000498058 GDF15Q99988 308 aa22.38■■□□□ 1.17
PRKCB-209ENST00000498058 SYN1P17600 705 aa22.37■■□□□ 1.17
PRKCB-209ENST00000498058 C12orf60Q5U649 245 aa22.37■■□□□ 1.17
PRKCB-209ENST00000498058 TMEM179Q6ZVK1 233 aa22.37■■□□□ 1.17
PRKCB-209ENST00000498058 MOV10L1Q9BXT6 1211 aaKnown RBP22.37■■□□□ 1.17
PRKCB-209ENST00000498058 PUS7LQ9H0K6 701 aaKnown RBP22.37■■□□□ 1.17
PRKCB-209ENST00000498058 CWC22Q9HCG8 908 aaKnown RBP22.37■■□□□ 1.17
PRKCB-209ENST00000498058 ATP8A2Q9NTI2 1148 aa22.37■■□□□ 1.17
PRKCB-209ENST00000498058 SWAP70Q9UH65 585 aa22.37■■□□□ 1.17
PRKCB-209ENST00000498058 USP17L12C9JPN9 530 aa22.36■■□□□ 1.17
PRKCB-209ENST00000498058 USP17L21D6R901 530 aa22.36■■□□□ 1.17
PRKCB-209ENST00000498058 HOXC6P09630 235 aa22.36■■□□□ 1.17
PRKCB-209ENST00000498058 CDK8P49336 464 aa22.36■■□□□ 1.17
PRKCB-209ENST00000498058 COG2Q14746 738 aa22.36■■□□□ 1.17
PRKCB-209ENST00000498058 TRPV1Q8NER1 839 aa22.36■■□□□ 1.17
PRKCB-209ENST00000498058 LAMA3Q16787 3333 aa22.36■■□□□ 1.17
PRKCB-209ENST00000498058 UBE3CQ15386 1083 aa22.35■■□□□ 1.17
PRKCB-209ENST00000498058 LRCH3Q96II8 777 aa22.35■■□□□ 1.17
PRKCB-209ENST00000498058 LRRCC1Q9C099 1032 aa22.35■■□□□ 1.17
PRKCB-209ENST00000498058 TANGO6Q9C0B7 1094 aa22.35■■□□□ 1.17
PRKCB-209ENST00000498058 ZNF236Q9UL36 1845 aa22.34■■□□□ 1.17
PRKCB-209ENST00000498058 GLRX3O76003 335 aaKnown RBP22.34■■□□□ 1.17
PRKCB-209ENST00000498058 CYP2C19P33261 490 aa22.34■■□□□ 1.17
PRKCB-209ENST00000498058 LRRC26Q2I0M4 334 aa22.34■■□□□ 1.17
PRKCB-209ENST00000498058 SPICE1Q8N0Z3 855 aa22.34■■□□□ 1.17
PRKCB-209ENST00000498058 TMX2Q9Y320 296 aa22.34■■□□□ 1.17
PRKCB-209ENST00000498058 COL11A1P12107 1806 aaPredicted RBP22.34■■□□□ 1.17
PRKCB-209ENST00000498058 A0A1W2PPC1 479 aa22.33■■□□□ 1.17
PRKCB-209ENST00000498058 DSG3P32926 999 aa22.33■■□□□ 1.17
PRKCB-209ENST00000498058 ICA1Q05084 483 aa22.33■■□□□ 1.17
PRKCB-209ENST00000498058 CTR9Q6PD62 1173 aa22.33■■□□□ 1.17
PRKCB-209ENST00000498058 C16orf86Q6ZW13 317 aa22.33■■□□□ 1.17
PRKCB-209ENST00000498058 ATG4CQ96DT6 458 aa22.33■■□□□ 1.17
PRKCB-209ENST00000498058 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.33■■□□□ 1.172e-6■□□□□ 9.8
PRKCB-209ENST00000498058 SPATC1LQ9H0A9 340 aa22.33■■□□□ 1.17
PRKCB-209ENST00000498058 HOXC10Q9NYD6 342 aa22.33■■□□□ 1.17
PRKCB-209ENST00000498058 SLC4A4Q9Y6R1 1079 aa22.33■■□□□ 1.17
PRKCB-209ENST00000498058 ZNFX1Q9P2E3 1918 aaKnown RBP22.33■■□□□ 1.16
PRKCB-209ENST00000498058 COBLO75128 1261 aa22.32■■□□□ 1.16
PRKCB-209ENST00000498058 ERCC3P19447 782 aa22.32■■□□□ 1.16
PRKCB-209ENST00000498058 BMP8BP34820 402 aa22.32■■□□□ 1.16
PRKCB-209ENST00000498058 ATP2B2Q01814 1243 aa22.32■■□□□ 1.16
PRKCB-209ENST00000498058 MFSD14CQ5VZR4 134 aa22.32■■□□□ 1.16
PRKCB-209ENST00000498058 CHMP4BQ9H444 224 aaKnown RBP22.32■■□□□ 1.16
PRKCB-209ENST00000498058 VCPKMTQ9H867 229 aa22.32■■□□□ 1.16
PRKCB-209ENST00000498058 IVNS1ABPQ9Y6Y0 642 aa22.32■■□□□ 1.16
PRKCB-209ENST00000498058 DNAH12Q6ZR08 3092 aa22.32■■□□□ 1.16
PRKCB-209ENST00000498058 GREB1LQ9C091 1923 aaPredicted RBP22.31■■□□□ 1.16
PRKCB-209ENST00000498058 ADORA2AP29274 412 aa22.31■■□□□ 1.16
PRKCB-209ENST00000498058 MAGEA10P43363 369 aaPredicted RBP22.31■■□□□ 1.16
PRKCB-209ENST00000498058 TSHZ3Q63HK5 1081 aa22.31■■□□□ 1.16
PRKCB-209ENST00000498058 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.31■■□□□ 1.16
PRKCB-209ENST00000498058 DDX20Q9UHI6 824 aaKnown RBP22.31■■□□□ 1.16
PRKCB-209ENST00000498058 CYBAP13498 195 aa22.3■■□□□ 1.16
PRKCB-209ENST00000498058 EEF2P13639 858 aaKnown RBP22.3■■□□□ 1.16
PRKCB-209ENST00000498058 SHCBP1Q8NEM2 672 aa22.3■■□□□ 1.16
PRKCB-209ENST00000498058 LPAR1Q92633 364 aa22.3■■□□□ 1.16
PRKCB-209ENST00000498058 CCDC17Q96LX7 622 aa22.3■■□□□ 1.16
PRKCB-209ENST00000498058 ARHGEF10LQ9HCE6 1279 aa22.3■■□□□ 1.16
PRKCB-209ENST00000498058 FLOT1O75955 427 aa22.29■■□□□ 1.16
PRKCB-209ENST00000498058 CNGA1P29973 690 aa22.29■■□□□ 1.16
PRKCB-209ENST00000498058 STRBPQ96SI9 672 aaKnown RBP22.29■■□□□ 1.16
PRKCB-209ENST00000498058 DCTPP1Q9H773 170 aa22.29■■□□□ 1.16
PRKCB-209ENST00000498058 ECHDC1Q9NTX5 307 aa22.29■■□□□ 1.16
PRKCB-209ENST00000498058 FBXO28Q9NVF7 368 aa22.29■■□□□ 1.16
PRKCB-209ENST00000498058 PLS1Q14651 629 aa22.28■■□□□ 1.16
PRKCB-209ENST00000498058 TMEM132BQ14DG7 1078 aa22.28■■□□□ 1.16
PRKCB-209ENST00000498058 SAMD1Q6SPF0 538 aaPredicted RBP22.28■■□□□ 1.16
PRKCB-209ENST00000498058 DPP9Q86TI2 863 aa22.28■■□□□ 1.16
PRKCB-209ENST00000498058 OSBP2Q969R2 916 aa22.28■■□□□ 1.16
PRKCB-209ENST00000498058 ADAMTS5Q9UNA0 930 aa22.28■■□□□ 1.16
PRKCB-209ENST00000498058 GSG1L2A8MUP6 293 aa22.27■■□□□ 1.16
PRKCB-209ENST00000498058 WDR46O15213 610 aaKnown RBP22.27■■□□□ 1.16
PRKCB-209ENST00000498058 STRNO43815 780 aa22.27■■□□□ 1.16
PRKCB-209ENST00000498058 PRAMEF19Q5SWL8 479 aa22.27■■□□□ 1.16
PRKCB-209ENST00000498058 ANO1Q5XXA6 986 aa22.27■■□□□ 1.16
PRKCB-209ENST00000498058 OLFML2BQ68BL8 750 aa22.27■■□□□ 1.16
PRKCB-209ENST00000498058 MB21D1Q8N884 522 aa22.27■■□□□ 1.16
PRKCB-209ENST00000498058 SENP6Q9GZR1 1112 aaPredicted RBP22.27■■□□□ 1.16
PRKCB-209ENST00000498058 SMCHD1A6NHR9 2005 aa22.26■■□□□ 1.15
PRKCB-209ENST00000498058 ZSCAN25Q6NSZ9 544 aa22.26■■□□□ 1.15
PRKCB-209ENST00000498058 NCAPG2Q86XI2 1143 aa22.26■■□□□ 1.15
PRKCB-209ENST00000498058 STK11IPQ8N1F8 1099 aa22.26■■□□□ 1.15
PRKCB-209ENST00000498058 KBTBD3Q8NAB2 608 aa22.26■■□□□ 1.15
PRKCB-209ENST00000498058 KANSL2Q9H9L4 492 aa22.26■■□□□ 1.15
PRKCB-209ENST00000498058 RASA1P20936 1047 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms