RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ANTXR1Q9H6X2 564 aa4.69□□□□□ -1.66
RIF1-212ENST00000498041 PAK6Q9NQU5 681 aaPredicted RBP4.69□□□□□ -1.66
RIF1-212ENST00000498041 PPT2Q9UMR5 302 aa4.69□□□□□ -1.66
RIF1-212ENST00000498041 SLC5A6Q9Y289 635 aa4.69□□□□□ -1.66
RIF1-212ENST00000498041 CAPN6Q9Y6Q1 641 aa4.69□□□□□ -1.66
RIF1-212ENST00000498041 TNFRSF10CO14798 259 aa4.68□□□□□ -1.66
RIF1-212ENST00000498041 JUNBP17275 347 aaPredicted RBP4.68□□□□□ -1.66
RIF1-212ENST00000498041 CCNFP41002 786 aa4.68□□□□□ -1.66
RIF1-212ENST00000498041 AOC3Q16853 763 aa4.68□□□□□ -1.66
RIF1-212ENST00000498041 INTS3Q68E01 1043 aaKnown RBP4.68□□□□□ -1.66
RIF1-212ENST00000498041 VPS37DQ86XT2 251 aa4.68□□□□□ -1.66
RIF1-212ENST00000498041 RBBP8NLQ8NC74 664 aaPredicted RBP4.68□□□□□ -1.66
RIF1-212ENST00000498041 AGBL5Q8NDL9 886 aa4.68□□□□□ -1.66
RIF1-212ENST00000498041 PIWIL2Q8TC59 973 aaKnown RBP4.68□□□□□ -1.66
RIF1-212ENST00000498041 BCL7CQ8WUZ0 217 aaPredicted RBP4.68□□□□□ -1.66
RIF1-212ENST00000498041 RNF141Q8WVD5 230 aa4.68□□□□□ -1.66
RIF1-212ENST00000498041 KREMEN1Q96MU8 473 aa4.68□□□□□ -1.66
RIF1-212ENST00000498041 CRBNQ96SW2 442 aa4.68□□□□□ -1.66
RIF1-212ENST00000498041 ASPNQ9BXN1 380 aa4.68□□□□□ -1.66
RIF1-212ENST00000498041 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
RIF1-212ENST00000498041 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.68□□□□□ -1.66
RIF1-212ENST00000498041 CAPN10Q9HC96 672 aa4.68□□□□□ -1.66
RIF1-212ENST00000498041 KCNH3Q9ULD8 1083 aa4.68□□□□□ -1.66
RIF1-212ENST00000498041 UBOX5O94941 541 aa4.67□□□□□ -1.66
RIF1-212ENST00000498041 ITGB5P18084 799 aa4.67□□□□□ -1.66
RIF1-212ENST00000498041 POLR2BP30876 1174 aaKnown RBP4.67□□□□□ -1.66
RIF1-212ENST00000498041 NASPP49321 788 aaPredicted RBP4.67□□□□□ -1.66
RIF1-212ENST00000498041 EIF6P56537 245 aaKnown RBP4.67□□□□□ -1.66
RIF1-212ENST00000498041 TNK2Q07912 1038 aa4.67□□□□□ -1.66
RIF1-212ENST00000498041 BNIP3Q12983 259 aa4.67□□□□□ -1.66
RIF1-212ENST00000498041 CDKAL1Q5VV42 579 aa4.67□□□□□ -1.66
RIF1-212ENST00000498041 CCDC81Q6ZN84 652 aa4.67□□□□□ -1.66
RIF1-212ENST00000498041 TAB3Q8N5C8 712 aaPredicted RBP4.67□□□□□ -1.66
RIF1-212ENST00000498041 CPLX3Q8WVH0 158 aa4.67□□□□□ -1.66
RIF1-212ENST00000498041 ASB11Q8WXH4 323 aa4.67□□□□□ -1.66
RIF1-212ENST00000498041 Q96M66 194 aa4.67□□□□□ -1.66
RIF1-212ENST00000498041 HSPA12BQ96MM6 686 aa4.67□□□□□ -1.66
RIF1-212ENST00000498041 TM9SF2Q99805 663 aa4.67□□□□□ -1.66
RIF1-212ENST00000498041 SRRTQ9BXP5 876 aaKnown RBP4.67□□□□□ -1.66
RIF1-212ENST00000498041 ST14Q9Y5Y6 855 aa4.67□□□□□ -1.66
RIF1-212ENST00000498041 CLEC3AO75596 197 aa4.66□□□□□ -1.66
RIF1-212ENST00000498041 PAPLNO95428 1278 aa4.66□□□□□ -1.66
RIF1-212ENST00000498041 ATF4P18848 351 aaPredicted RBP4.66□□□□□ -1.66
RIF1-212ENST00000498041 RNF4P78317 190 aa4.66□□□□□ -1.66
RIF1-212ENST00000498041 PKN1Q16512 942 aa4.66□□□□□ -1.66
RIF1-212ENST00000498041 SPRED2Q7Z698 418 aa4.66□□□□□ -1.66
RIF1-212ENST00000498041 THAP5Q7Z6K1 395 aa4.66□□□□□ -1.66
RIF1-212ENST00000498041 LSRQ86X29 649 aaPredicted RBP4.66□□□□□ -1.66
RIF1-212ENST00000498041 DTWD2Q8NBA8 298 aa4.66□□□□□ -1.66
RIF1-212ENST00000498041 OR6P1Q8NGX9 317 aa4.66□□□□□ -1.66
RIF1-212ENST00000498041 VWCEQ96DN2 955 aa4.66□□□□□ -1.66
RIF1-212ENST00000498041 SLC9A7Q96T83 725 aa4.66□□□□□ -1.66
RIF1-212ENST00000498041 SEMA3GQ9NS98 782 aa4.66□□□□□ -1.66
RIF1-212ENST00000498041 STRIP2Q9ULQ0 834 aa4.66□□□□□ -1.66
RIF1-212ENST00000498041 PITPNM2Q9BZ72 1349 aa4.66□□□□□ -1.66
RIF1-212ENST00000498041 H3BS24 57 aa4.65□□□□□ -1.67
RIF1-212ENST00000498041 LRRN2O75325 713 aa4.65□□□□□ -1.67
RIF1-212ENST00000498041 ACRP10323 421 aa4.65□□□□□ -1.67
RIF1-212ENST00000498041 CD8BP10966 210 aa4.65□□□□□ -1.67
RIF1-212ENST00000498041 GUCY2CP25092 1073 aa4.65□□□□□ -1.67
RIF1-212ENST00000498041 GIPRP48546 466 aa4.65□□□□□ -1.67
RIF1-212ENST00000498041 ZNF792Q3KQV3 632 aa4.65□□□□□ -1.67
RIF1-212ENST00000498041 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
RIF1-212ENST00000498041 NBPF12Q5TAG4 269 aaPredicted RBP4.65□□□□□ -1.67
RIF1-212ENST00000498041 DHRS1Q96LJ7 313 aa4.65□□□□□ -1.67
RIF1-212ENST00000498041 TINF2Q9BSI4 451 aa4.65□□□□□ -1.67
RIF1-212ENST00000498041 TRIT1Q9H3H1 467 aaKnown RBP4.65□□□□□ -1.67
RIF1-212ENST00000498041 RBAK-RBAKDNI3L0D1 243 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 BIN1O00499 593 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 CD96P40200 585 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 ARID5AQ03989 594 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 IKZF1Q13422 519 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 ANGEL2Q5VTE6 544 aaKnown RBP4.64□□□□□ -1.67
RIF1-212ENST00000498041 RUFY4Q6ZNE9 571 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 WFDC3Q8IUB2 231 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 KSR1Q8IVT5 923 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 TMEM192Q8IY95 271 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 SLC43A3Q8NBI5 491 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 UBE2FQ969M7 185 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 SHDQ96IW2 340 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 SLC6A18Q96N87 628 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 GPR62Q9BZJ7 368 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 DUSP15Q9H1R2 295 aaPredicted RBP4.64□□□□□ -1.67
RIF1-212ENST00000498041 RC3H2Q9HBD1 1191 aaKnown RBP4.64□□□□□ -1.67
RIF1-212ENST00000498041 GPATCH2Q9NW75 528 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 ZSWIM5Q9P217 1185 aa4.64□□□□□ -1.67
RIF1-212ENST00000498041 FAM86C2PA6NEL3 165 aa4.63□□□□□ -1.67
RIF1-212ENST00000498041 FARP2O94887 1054 aaPredicted RBP4.63□□□□□ -1.67
RIF1-212ENST00000498041 SSBP05455 408 aaKnown RBP eCLIP4.63□□□□□ -1.67
RIF1-212ENST00000498041 SRFP11831 508 aa4.63□□□□□ -1.67
RIF1-212ENST00000498041 FUT4P22083 530 aa4.63□□□□□ -1.67
RIF1-212ENST00000498041 ZC3H6P61129 1189 aaKnown RBP4.63□□□□□ -1.67
RIF1-212ENST00000498041 NBPF9Q3BBW0 867 aa4.63□□□□□ -1.67
RIF1-212ENST00000498041 UNC5AQ6ZN44 842 aa4.63□□□□□ -1.67
RIF1-212ENST00000498041 TMPRSS7Q7RTY8 843 aa4.63□□□□□ -1.67
RIF1-212ENST00000498041 C19orf47Q8N9M1 422 aaKnown RBP4.63□□□□□ -1.67
RIF1-212ENST00000498041 FAM168AQ92567 244 aa4.63□□□□□ -1.67
RIF1-212ENST00000498041 ASCC2Q9H1I8 757 aaPredicted RBP4.63□□□□□ -1.67
RIF1-212ENST00000498041 ATP13A1Q9HD20 1204 aa4.63□□□□□ -1.67
RIF1-212ENST00000498041 LMCD1Q9NZU5 365 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms